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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000100_pilon:1177690..1180635+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12982.1.p1 ID=MSTRG.12982.1.p1|Name=MSTRG.12982.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2946bp|location=Sequence derived from alignment at sc0000100_pilon:1177690..1180635+ (Clytia hemisphaerica_ch_hm2_pilon)
TTCATGAAAGTCAATCTTGCATCAAGATGTCAGCCAATCGGTGCAGTTTT
AAGGAGCCTTGTGATACCGTAACTGTATTGGTGCTTTTAGTGTTGATCAT
AATCCATCTTATCTGTTACCCTGCGTTATTGTGGTGTTCGGGATTCTGCG
TGAAACGTCGCCGTAAATGGTACCATTGGAGACTGCTCTACGTGCGTAAG
TTgagatcattgattttttcaaagctccgAAGGGGCTACATTTAAAATTC
TTGCAGAAcagaaatgaagccacttatttttcCCATCCTAAACCCGTGAT
TTCTAAATGCGGGGCATATTTAAGGTTTCACTTTCTCTTGTTTGAGAAAG
TTTGAAGATTCCTCTCCACCTGCTGAGCTTCAAACTCAATAGTTCAGATA
GCTGTATGCTTTGTTTTATCAAAGATGTTCCAGGTTTACCATCAGGTCTT
CCTTAAAGTGATTTTTATTCCAATATCAGTATGCGGCGCATGCGTACTTT
TTCGATTCAATTGTTTTTTGGTTCAATATACCAACCCTGGGTCAAACTGT
AACTCATAAAaacttggatatccaggctaaagtTGAGacttttattctta
taaaagaaaaagcatgTATTTTTCGGGTAACGTGCTTGATTTTTAACCAA
TTAAGTAAAAGCCTCTAGCCCTTTGGCCttttatacttcattggttttaA
CAtaagttttccttttttaatataAATTCAAACCTCGGTAAGTAAAATAT
AAGGTTTTGATACGAAAAATTGATAttcaagcaaaaaagagggaaaTTTA
GTCCAGGACAATAAATGTCGGAAGTATACTTACTGCGAAGTTAAAGTAGA
ATGAAGGCGGAAGAGGGAAGAGTAAAGCACAAATGAAATATCTCCCTAAC
ACggaatatttattttatgttcATTCTCGGCTTACTAATGATTGCTTGAG
TTTTCATGGATATgattaagtttttattttttggtgtTCTGTACATGATA
TGCTTTGGTGCATATGCTGCAATATTTCATTGTATAACTAAGCATCGTCA
ATTATGTTTGAAATACCTTCGTTTTATTCTTATTTCGCGTAAGTCAATAA
TCGGCTCTTCCataaaatgttcgtacatggggtgtagaggatatagtgtc
cggggggtcaactaatgcttgtccggaAAGTTAGACCTGCTGttcggggg
tcaaaagtcacaatgtccgggggggggggtaaatttccaaaaaatgctat
atcctccaccccctatattcaatttttttcttgaaaatcccATTCAAAAA
ATCTGTAACTCTGAGGTGTACTTAAGGGAATGGTCTCTTAGACTAAAACT
AACTCGTCACTAGCTTGTCAAAAAACTCCGAAGTCTGTCTCAGAATTACG
TGGACACTATAATAAAAAGTCACacatcattggaaagatattttcaagga
GAACACAcgcttcttttataagaatggtttaagaatggtgtaaatccatt
tcatcatggaaaatcgtcctaaaatattcttacagcattcttaagttagg
atcctaattcagactagatttaacatttagtacatacgtctcaagcataa
aatgcggcatttttgtgaaaggagtgagccttacttgggggtaattgata
gtttataattgaaaatgctctaaaaatggcattcttagctttagctttga
gtAGCAGAATTCCAGGATCGTGATATTctaagcattattcttaatttttt
ggccattttcatcatggacattcttataacgtgtattcttataaagaatc
tTACAGatttagttgaaaaatgaagaagaaaaataaaatgaaaaaaagaa
tactggttcaaaaatCATGACATCAGATTCTTTAAAAGATTAGAATATTT
GAACTTTGTTGACTTCAAATCTGCTAtcagatttttcatatttttgttgG
ATATAATTTTACAGCCCTTTGGAAGAGGCCTAAAATAACTGAAACAGCAA
AAAACGAATACAGATTTGGAATCAGCAAAGCtcaaatattctaaaaagaA
TGATGccattggaaaaaatttgcTTGAAATTGTTATCCTTAAAATGTCTA
TCAATCTTTCATTACAGATTCCGCGGTTAGTGTGTTAGCGTGGTTGGCGC
TCCTTATAATTTACCCGACATCTTCAACTACAATGTTGGGGACATTCGCT
TGGTTCATTGGCTCAATCATTCATCTAACTCTCTGTCTGGTATATAATCG
ATTCATAGAAAATCAAAGTCTTTCAACAGATTCGATTGAAAAGATTGTTA
TTGATAATTTACCTACAGAACCGAAAGTGATTACTCAATGCGAGGCTGTG
GAGCCTCTAACTTCTTGCTGCAGAAAACAAAGAGTTATTTGGAGCAATCA
GAAAGAGTTCGAATTTCAACATTGGATCGATGTGACTGAACAGCATTTGG
TGAAATCACAAATTGAAGAAGCGATttttattgaattgaaaattgaattc
gAATTTGATGACGAAGAAACCAAAGAATCATATGAACAACACGTTCAGAA
TCTTGTAAAAGAAGCAAAGCAACATTCCCCAAACGCTCAAGTCAATATCA
AACAAATTTTCCAAGTCGGTGAAAAAGATATCAAAACCTACAGACGGTCG
TTTTATGGAAAGAAGGCTCTTTTTGGAAGACCATGCGCGTGTCTTCAATG
CATTTTCCCTCAAATCGAACTTTcgttcaaaatattgaaaaggtTTCTCG
AAAAATTTGGTTTGAAAAGTTTATTGACCAAGGAAATTGTAATCAGAAAA
GTAATATCTGACAGAAATATTGTAGCTGTATAGCATTTGTGATAAATAAT
TTTATACCATTTTGAATAATATAACAGAGCGGAAACTAACCACGCTAATG
GCATGTCCCACGTTACTGGCTTCGTGTCTAAAATATTAAGCTATTC Coding sequence (CDS) from alignment at sc0000100_pilon:1177690..1180635+ >MSTRG.12982.1.p1 ID=MSTRG.12982.1.p1|Name=MSTRG.12982.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1818bp|location=Sequence derived from alignment at sc0000100_pilon:1177690..1180635+ (Clytia hemisphaerica_ch_hm2_pilon)
CATGAAAGTCAATCTTGCATCAAGATGTCAGCCAATCGGTGCAGTTTTAA
GGAGCCTTGTGATACCGTAACTGTATTGGTGCTTTTAGTGTTGATCATAA
TCCATCTTATCTGTTACCCTGCGTTATTGTGGTGTTCGGGATTCTGCGTG
AAACGTCGCCGTAAATGGTACCATTGGAGACTGCTCTACGTGCATTCCGC
GGTTAGTGTGTTAGCGTGGTTGGCGCTCCTTATAATTTACCCGACATCTT
CAACTACAATGTTGGGGACATTCGCTTGGTTCATTGGCTCAATCATTCAT
CTAACTCTCTGTCTGGTATATAATCGATTCATAGAAAATCAAAGTCTTTC
AACAGATTCGATTGAAAAGATTGTTATTGATAATTTACCTACAGAACCGA
AAGTGATTACTCAATGCGAGGCTGTGGAGCCTCTAACTTCTTGCTGCAGA
AAACAAAGAGTTATTTGGAGCAATCAGAAAGAGTTCGAATTTCAACATTG
GATCGATGTGACTGAACAGCATTTGGTGAAATCACAAATTGAAGAAGCGA
TttttattgaattgaaaattgaattcgAATTTGATGACGAAGAAACCAAA
GAATCATATGAACAACACGTTCAGAATCTTGTAAAAGAAGCAAAGCAACA
TTCCCCAAACGCTCAAGTCAATATCAAACAAATTTTCCAAGTCGGTGAAA
AAGATATCAAAACCTACAGACGGTCGTTTTATGGAAAGAAGGCTCTTTTT
GGAAGACCATGCGCGTGTCTTCAATGCATTTTCCCTCAAATCGAACTTTc
gttcaaaatattgaaaaggtTTCTCGAAAAATTTGGTTTGAAAAGTTTAT
TGACCAAGGAAATTGTAATCAGAAAAGTAATATCTGACAGAAATATTGTA
GCTGTATAGCATGAAAGTCAATCTTGCATCAAGATGTCAGCCAATCGGTG
CAGTTTTAAGGAGCCTTGTGATACCGTAACTGTATTGGTGCTTTTAGTGT
TGATCATAATCCATCTTATCTGTTACCCTGCGTTATTGTGGTGTTCGGGA
TTCTGCGTGAAACGTCGCCGTAAATGGTACCATTGGAGACTGCTCTACGT
GCATTCCGCGGTTAGTGTGTTAGCGTGGTTGGCGCTCCTTATAATTTACC
CGACATCTTCAACTACAATGTTGGGGACATTCGCTTGGTTCATTGGCTCA
ATCATTCATCTAACTCTCTGTCTGGTATATAATCGATTCATAGAAAATCA
AAGTCTTTCAACAGATTCGATTGAAAAGATTGTTATTGATAATTTACCTA
CAGAACCGAAAGTGATTACTCAATGCGAGGCTGTGGAGCCTCTAACTTCT
TGCTGCAGAAAACAAAGAGTTATTTGGAGCAATCAGAAAGAGTTCGAATT
TCAACATTGGATCGATGTGACTGAACAGCATTTGGTGAAATCACAAATTG
AAGAAGCGATttttattgaattgaaaattgaattcgAATTTGATGACGAA
GAAACCAAAGAATCATATGAACAACACGTTCAGAATCTTGTAAAAGAAGC
AAAGCAACATTCCCCAAACGCTCAAGTCAATATCAAACAAATTTTCCAAG
TCGGTGAAAAAGATATCAAAACCTACAGACGGTCGTTTTATGGAAAGAAG
GCTCTTTTTGGAAGACCATGCGCGTGTCTTCAATGCATTTTCCCTCAAAT
CGAACTTTcgttcaaaatattgaaaaggtTTCTCGAAAAATTTGGTTTGA
AAAGTTTATTGACCAAGGAAATTGTAATCAGAAAAGTAATATCTGACAGA
AATATTGTAGCTGTATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000100_pilon | genome | sc0000100_pilon:1177690..1180635 + |
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