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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000100_pilon:1132776..1136565- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12977.1.p1 ID=MSTRG.12977.1.p1|Name=MSTRG.12977.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3790bp|location=Sequence derived from alignment at sc0000100_pilon:1132776..1136565- (Clytia hemisphaerica_ch_hm2_pilon)
AATCGGGCGAATTACTTTATAATCGGGATATCGGGATTGAGCAACAAATG
TACAAAGCGAAACAAAATGTCTGCCGAAAATGATCACGCTGGAGCAGGTG
AAGAAGAAGATGCTACTGAACTTCAATTTCCCAAAGGTATTAATTTATTT
CATTACTTCTTGTAGTCAACTATAAATTCTTTAAATGTAAAGGTGTTAAA
TTGTTAAAGTTTTGTTGTACTGGGGAATCTGAATTTGGTAATAACTTTGA
CTTTTTTTGGGATGATCCTCGACACAAAAAACTTTCAGATTTTTTTCTGG
CATTGGGCCGATAAAGGGGTGGGAGGTCCAACTACATACCGATAAGAAAA
CAAGTATTGGGACAAAGATCTTTTCAGCCAATTGACCTTTTTTCAAAGAG
GACGTCCTGTTGAATAATTATGTAGTCCAGCCATAAAAACAATGATAGAG
CCATGCATAATTACTGTATCATGCACATTGTAATAGTTATGCATGGTTTA
TCATTGTTTTTCTGCTGGACTACATAATTATTCAACAGGGTGGCCTCTTT
GAAAAAAGTTCTATTTCAAAGTATATTGTCAGTGAAGGAAGAATGGTTTT
TAATTGAGAAATCAGTTTTGGCACCAGACTTTTTACGAACACCCCAGCCG
TAATTAACTGAACCAATCGAACGGTATTTTTAATCAAACTTTGTTGAACT
TAATCGAACTTTGTTGGCCGATTAATGTTCGACTAAAAGTTCGTTTGTCG
AACTTTAATCGAATACAGGCAGGACCCTGCCGACGCACCGGACTGTCCGG
TGTATTTGTCTGATGGCAAAAAGTATCCTTTCGCTACACCGGACGCAATA
AGTCCGGTGTCAGTCCGGTGTTGCATACATGGAATTTTGGACGTCGGACA
TTTATGAAACAAAAAATTAAGAAGCACTGGACGCACCGGACTGGTCATGT
CCGGTGTTTTGATTGTCCGGTGCGGTGGAAAAAATATCCTTCTCCGACAC
CGGACATCCGACTTCCTTAAGTCCAATGTAGAGATTGTCTGGTGGTAAAA
AAAAATTATCATTTTACACCGGACTTTAGTGTGTCCGGTGTTCATTAATT
CCGGTGCGTCGGCAGGGTCCTTCGAATACTCACAAGTTTCTCAAAATACA
AAGTTCCATTAAGTTCGATTACTGAAAGCCGCTCCACTTGCGCGTAATTC
GATCTCACTTTTTTCCGGCCTTTGGCGACACTTTGAGGAACTTTGAAGGA
CCCCCCGCTGGTGCAGGCGTGTACCCTCACATCCCCCTGACCAGTGGGCA
CTGATCCAACCCTCCAGAACCCCGGCCAGGACCTCCAAGGGCCGTCCGCG
GTGGTACCCAAAGGAGGTCATTTTTTTTCCAATTGTGACCAATTTTCAAG
CCTTTCGGCCTTTTCAAGCCTTTTAAAGGCTTCGGATGACTGCTGGAGGG
TGCTGGCTTTGAGGGAAAGCAAGGCAGAGGGTATTTGAAGCGGTCTGAAG
GGCTGTGGTAGGCTGTGGGGGGCTGTAGAGGCCTCGATTGGTCCCACCGG
GGCTGGTACCCAAAGGAGGTCATTTTTTGAAATTTTTGCCGGCTTTTGAC
AACACTTTGAGGAACTTTGAAGGGCCCCCAACGGTGCAGACGTGTACCCT
CACATCCCCCTGACCAGTGGGTACCAATCAGACCCCCGGTACCTTGGCCG
AGACTTCCAGGGGCTGTCCACGGTAGTACCCAAAGGAGGTCATTTTTTGT
TGTCAAACTTTTTTAAACAGAGTTTTTTTTTTGAATTTGTCAAACCTTTC
TTGTGGTCAAACTTTATCGAACAAAGTTTTTTGTCAAATTTGTCAAACAT
TTCTCGTTGTCAAACTTTGTCGAAGTTAATATGTTTTTGTCAAACTTAAT
AGAATACTCACAATTTTAGCAACTTTTGAAAAGTCCGATTAAAGAATTTA
ATCGTACTTTTGTCGTGCGATTAAGTTCGACAAAGTTCGATTAGTTCGGT
AATCGAACTGTTCGATTTATTACGTCTGGAACACCGGACACGCAACGTCC
GGCCGGTGTTGGATGAGGATACTTTTTAACACCGGACAATCTCCTCAACA
CCAGACTCGATTCCGGTGCGCATTATTTTTTAAACAAGCTTTGTCCGGTG
TCCAGAAGTTCAAAAAATCAACACCGGACAAAATGTTTTCCGTGTGGCTG
AGGGGTACTTTTTGGCACCGGTCAAACACACCAGAATGATATAGCTTCTG
TTTCGCTAGAGCAACAGACTTGTATGAGTGTTTAGTATGTACTTATTTTT
ATCTTGTTACGCAGAATTTGAGTCAGCAGAAACATTATTGAATTCAGAGG
TTTTCATGTTGTTGGAACATCGTAAATCACAGAACGAAAATGCAGATGAT
GAACAAGAGATGAGTGAAGTTTTCATGAAAACATTGAATTATACTCAACG
GTTCAGTCGATTCAAAAACAGAGAAACGATCGCTCAAGTCAGAGGGTAAG
TAGTACTTCATCTCTACTGAGAAAACTGAGACTTATTTTTTACCTACTAG
TTTTTGTAATGAATTTTCTGTTGGCGAATAAGTTTTGCTCTGTCTGAGAT
TTGTAAGCTGTTTTCTACATTATATGATAATTAGGAAATAAATGCAAAAA
ACTAAATCAAGGGAATTTTAAAATCTGTATTTCGTAGGAAGAGGTTTTAC
TGTAGTGAAGGAATCAAAGCTCAGACCTCTTTTTTGAGTCATTCGCCAAA
ATCAATTTCTTACCGAGAAATACACGACGGATACTGAAGTTAAAGCTATT
TACTCGCTCTTACTTATGCTCTTCTGTCTTACATTTTACAGACTTCTATC
GAAAAAGAAGTTGCACAAATTCGAACTGGCTTGCATTGCTAATCTTTGTC
CAGAGACAGCAGAAGAAGCAAAGACTCTTGTACCAAGGTTAAAGTTTTTC
CCTTGTTTGAGTTTTTGGTTTAGTAGTGTGACATGGTCTCGCATTGATAA
AATCTTGCTGAAATCCATGAACGGAATTTTCATTTAGTTTGGAAAGCGGA
ATCTTTTATTATTTGAACAAATTTTAAATGAGTTTGGGGTTTTCCGCTTG
AGTCAATCGCAAAAAGGAACTCGTCTTTCAAATGAAAACACGAGTTGAAA
TTTTCAATGCTTCATTCCGGAATCCATGAAGAAATCTCATGAAACGTCAG
AAAGAAGTTTCGAATGTCTAAACTGGCTTAAGACTCTTTCTCGCAAAATT
AAATAAAAAGTTCAGTTTTTCACTTCGACTAAACTGAAACAGTCTGATAG
TAGTGTTCTTTTCAACATATCCAACATATTTTTATTGTTGGTGGTATGGG
GACTACTAATTACAAATGATCATGTATCAATATGATTCCCTTTTTTTTCA
GTTTGGAGGGCAGATTTGACGAAGACGAACTACAGCAAATTCTTGATGAA
ATTAAAACGCACAGAAGTTTCCAGTACTAATATGGAAAAAGGCTTGGGTT
TGCTTACAACTTTGATGCCAGACGAAAGATTCTCTTAGCATCTAGTTTCT
GAACATTTTTAATGGAAAGGTAGACAGCGTATGGCTAACGTTTTTATGAG
GATGTCTTTTCTAGAACATGAAAAATGGCTTATTTATTGATTCATGAGGA
TACTGTGCGTAGTTTTCTTTGTTGAGTGAAGTAAGGAACTTTTTGTAAAT
ATTTTTACCGATTTTTCATTTTTCTGTTAATTCTAAAGACCTAACAATCA
GATAAAAAATTGCAGTCGTCTGATTTTGATCACTATTAAA Coding sequence (CDS) from alignment at sc0000100_pilon:1132776..1136565- >MSTRG.12977.1.p1 ID=MSTRG.12977.1.p1|Name=MSTRG.12977.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1968bp|location=Sequence derived from alignment at sc0000100_pilon:1132776..1136565- (Clytia hemisphaerica_ch_hm2_pilon)
TTTGGAGGGCAGATTTGACGAAGACGAACTACAGCAAATTCTTGATGAAA
TTAAAACGCACAGAAGTTTCCAGTACTAAACTTCTATCGAAAAAGAAGTT
GCACAAATTCGAACTGGCTTGCATTGCTAATCTTTGTCCAGAGACAGCAG
AAGAAGCAAAGACTCTTGTACCAAGAATTTGAGTCAGCAGAAACATTATT
GAATTCAGAGGTTTTCATGTTGTTGGAACATCGTAAATCACAGAACGAAA
ATGCAGATGATGAACAAGAGATGAGTGAAGTTTTCATGAAAACATTGAAT
TATACTCAACGGTTCAGTCGATTCAAAAACAGAGAAACGATCGCTCAAGT
CAGAGGAATCGGGCGAATTACTTTATAATCGGGATATCGGGATTGAGCAA
CAAATGTACAAAGCGAAACAAAATGTCTGCCGAAAATGATCACGCTGGAG
CAGGTGAAGAAGAAGATGCTACTGAACTTCAATTTCCCAAAGTTTGGAGG
GCAGATTTGACGAAGACGAACTACAGCAAATTCTTGATGAAATTAAAACG
CACAGAAGTTTCCAGTACTAAACTTCTATCGAAAAAGAAGTTGCACAAAT
TCGAACTGGCTTGCATTGCTAATCTTTGTCCAGAGACAGCAGAAGAAGCA
AAGACTCTTGTACCAAGAATTTGAGTCAGCAGAAACATTATTGAATTCAG
AGGTTTTCATGTTGTTGGAACATCGTAAATCACAGAACGAAAATGCAGAT
GATGAACAAGAGATGAGTGAAGTTTTCATGAAAACATTGAATTATACTCA
ACGGTTCAGTCGATTCAAAAACAGAGAAACGATCGCTCAAGTCAGAGGAA
TCGGGCGAATTACTTTATAATCGGGATATCGGGATTGAGCAACAAATGTA
CAAAGCGAAACAAAATGTCTGCCGAAAATGATCACGCTGGAGCAGGTGAA
GAAGAAGATGCTACTGAACTTCAATTTCCCAAAGTTTGGAGGGCAGATTT
GACGAAGACGAACTACAGCAAATTCTTGATGAAATTAAAACGCACAGAAG
TTTCCAGTACTAAACTTCTATCGAAAAAGAAGTTGCACAAATTCGAACTG
GCTTGCATTGCTAATCTTTGTCCAGAGACAGCAGAAGAAGCAAAGACTCT
TGTACCAAGAATTTGAGTCAGCAGAAACATTATTGAATTCAGAGGTTTTC
ATGTTGTTGGAACATCGTAAATCACAGAACGAAAATGCAGATGATGAACA
AGAGATGAGTGAAGTTTTCATGAAAACATTGAATTATACTCAACGGTTCA
GTCGATTCAAAAACAGAGAAACGATCGCTCAAGTCAGAGGAATCGGGCGA
ATTACTTTATAATCGGGATATCGGGATTGAGCAACAAATGTACAAAGCGA
AACAAAATGTCTGCCGAAAATGATCACGCTGGAGCAGGTGAAGAAGAAGA
TGCTACTGAACTTCAATTTCCCAAAGTTTGGAGGGCAGATTTGACGAAGA
CGAACTACAGCAAATTCTTGATGAAATTAAAACGCACAGAAGTTTCCAGT
ACTAAACTTCTATCGAAAAAGAAGTTGCACAAATTCGAACTGGCTTGCAT
TGCTAATCTTTGTCCAGAGACAGCAGAAGAAGCAAAGACTCTTGTACCAA
GAATTTGAGTCAGCAGAAACATTATTGAATTCAGAGGTTTTCATGTTGTT
GGAACATCGTAAATCACAGAACGAAAATGCAGATGATGAACAAGAGATGA
GTGAAGTTTTCATGAAAACATTGAATTATACTCAACGGTTCAGTCGATTC
AAAAACAGAGAAACGATCGCTCAAGTCAGAGGAATCGGGCGAATTACTTT
ATAATCGGGATATCGGGATTGAGCAACAAATGTACAAAGCGAAACAAAAT
GTCTGCCGAAAATGATCACGCTGGAGCAGGTGAAGAAGAAGATGCTACTG
AACTTCAATTTCCCAAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000100_pilon | genome | sc0000100_pilon:1132776..1136565 - |
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