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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000006_pilon:1390604..1396044- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.1297.1.p1 ID=MSTRG.1297.1.p1|Name=MSTRG.1297.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5441bp|location=Sequence derived from alignment at sc0000006_pilon:1390604..1396044- (Clytia hemisphaerica_ch_hm2_pilon)
GAAATATTGAAGAAACCAATCGATAACACAAACGTAGGGCGAATAGCAGA
AAATTTCTTCTTCTCTTTCGCATCGTGCCGTGAAAAACTCATCGAAAGAA
CATTGGAGTTTCAATTTGATTTTATCACTGTATAACAAGAGGGATTTTCG
AAGAGCGATGGATTTGCATTTGGTATTGAGCGTTTTGTTGTTTTGTATCT
ACGTCCATTACACAGGTAAGAAAAATGAGTCGTGAAAGATGAAAGCAATG
AACCAAACATCCCTGTCAGCGTGCAAAAGATCTCGAATAATGCAGAAGTA
TAGTTAAGCCCTGTTATACATACTTGTTTAATTTTTCCATCCTACATACA
CTCGAGGCTCAAAAATGCCAAACAAATAAGAACGATTTAAGAACAACCGT
CAGCCTAGAATGACTGAATTTTAGCCAATATAAAGATCAAAACGCTAAAA
ATAGGGTATCAAGCCAGAAATAACCCAATTTGCCCAAAAATTAAAACAGG
ATAAGAACAATTAGTCTGATTCGCAGACCTATACTTCCTATAAGAAACTT
TTTTCGCTAGAGAATGAGCAGAAGCCTAAAGAACAATTTGACGTTAAAAG
TGCCAAAAAAATAAGAACAGTCGAGCCTCAGCAAAAATTTGCTGGTTCTT
ATAAAAAGAGTGTATTGCTTCACTATACACAGGAAAAAGTTTTCGATTTT
CAAGGTTGGAAATTCATTATTTTTGGGTTGGAAATTTTGGTTTTATAATT
GAAGGTTGGAAATTTGAGCGATTACCTTAAGCTGATTTGGAAAACGTAAA
TTACCCATAGGTTTTGTAGAATAAACCAATGCCCTTGAAAAATCAAGTGA
AAAAAACCCATGTAGAAATGACAATTTTCCAAGGCTGGTTGGAAAACATG
ATTTTTTGGGTGGGAAATTTTTATTTTCCAAACAGTTTGGGAATTGAAAA
AAAAGGTCAAAAATCGATGTGAAAATACATATTTTAGTAAATTTGATACC
TCAAGTTGAAAAACTAGACTTTTTGGGTCGGAAATTTGTGTTTCTCCAAA
CAGTTTGGAAAACGTTAAAAATCCATGTGGAAATTACATTTTTCTAAGAT
TGAGACCCTTTCTTGGAAAACTAGACTTTTTGGGTTGGAAATTTGTGTTT
CTCCAAACAGTTTGGAAAACGTTAAAAATCCATGTGGAAATTACATTTTT
CTAAGATTGAGATCCTTTCTTGGAAAACTAGACTTTTTGGGTTGGAAATT
TGTGTTTCTCCAAACAGTTTGGAAAACGTTAAAAATCCATGTGGAAATTA
CATTTTTGTGAAATTGAAACTCTTTCGCAGGGGCCGCGGCTCCACTTTTA
AAGTGGTAGGGCCATGGTTTAGTGTCTAAGGAGGTGCCACCATGGTTGGC
GCGGACGGGAGAAATTTTTGAAAATTAGCCCTTCTAGACTGCCTAAAACA
GGTCTTTTTCAAGGTTTTTACGCAGAATTTAGCTGAATCAGTAAATTTTT
TTTTTGCTTTGAAAAAATGTGGTCGGGCCAATGCCCGGGTGGCCCCCCCC
CCGCTGCCGCGGCCCCTGTTTCGATTGGAAATCTAGACTTTTTGGGTTGG
AAATTTGTGTTTCTCCAAACAGTTTGGAAAAAGGTTAAAAATCCATGTGG
AAATTACATTTTTGTGAAATTGAAGCTCTTTCGATTGGAAAACTAGACTT
TTTGGGTTGGAAATTTGTGTTTTTCCAAACAGTTTGGAAAACGTTAAAAA
TCCATGTGGAAATAACGTTTTTCTAACCATTTTCTGCGCATGTCCTTGGG
AAAACCACAAGCGATTTTTCGCTCAAAACTGTTTTGATGTATAGCTAACC
TAGATATTAGGCTATAATGTGAGCAGTCAAGCTGTAAGTTTCCGTCAGGT
GAGGCGTCTCTTCGGAGCGGCCTCGGTTAATCGCAGTGAGTTCGCACAGT
GAAGCACATAGGGTACTTGTGTCATAGTTTCAAATAGTGCCCTGCTGAGC
TGTGTAAGTGATATCTAAGATCAACCACGTATCTGTGCGAACAATAACGA
GAGATTGACCGGGATCCATCGAGCCTAGGCTAGCGAGTGACTGTTCACAA
AAACCAAAAACCTTGTTTAAGATCTCTTTTCCACATCTCTGCCATCACTT
TTTGGATTTTGGCTTTTTTCAACCTGAATTTTCGAAATTTCCAACCTTGT
TTAGCTTGGATTCTGGCTTTTTTCCAACTGAATTTACAAAAATTCCAACC
TTGTATTTCGGCTTTTTTACACCTGGATTTTCGAAATTTCCAACCACCTT
AAATTTGTATTTTGGCTTTTTTCAACCTGGATTTTTTTAAATTCCAAGCC
ATGGAAAATTTGGATTTTGGCTTTATCCAACCTCGATTTTCGAAAATTCC
AACCTTGTTTAAGCTTGGATTTTGGCTTTTTTCCAACTGAATTTTAAAAA
ATTCCAACCTTGTTAAATTTGGATTTTTGCTTTTTTCAACCTGGATTTAC
GAAAATTCCAAGCCATGGAAAATGCCAAATTTCCAACCTTGGAGAATGTC
CCAAATGCGTGTACCTATCCGTCAGTTCAATTTTCCTTTATAAACGAACA
TGGAAAATCGAAAAAAATCGAATTTTCCATTTTGTCTTTGGCTAAAAAAA
CGAACCATGGAAAATTGAAATTTTTGATTTGATTTGTTTTAAAAATTCCT
AAATTTTTTTCACTAACACAAAAATTGACAAATTTTGTCAAATTTTGTGA
TTTTCATTTCGTTTATTCAATATACGATGATGAATTGAAAAATGAACTGA
AAATTTTTGATTATTCAATTATCATTCGTTGATTGAGAAACACGTAGAGC
GGACAGCAATCAAAATAAAATTTAGCACTCGTAGTGTAATTACACTTTTT
TATAACACGCCCGGGGAGGGGGCACTCCAGATAAGTGACCTACTGGACGT
GCGGCCCTTAAGGGTAGGTCTTTTGGACTTTGGAAAGTGCACTGCAAGGG
CTGATTTGTGAGCAAGTGGGAAAAAGTGCACTGTAAAGGGTGTAAAATTT
GAGAAAATACCAAATTTTGAGGTAAGATTTGAGAAATTTCAATTTGCCCT
GAAAAGAGCAAAAAATTTCGAAAAATTGCACTACAAGGGTCGATTTTCAG
CCAAATCTTTCCTGCACTGTAAGGGTCCGATTTTAGAGACCTGATCTTTG
GCCGAACGTACGGTGGTTTTCAAAATCGAGTATCCGCCGGGGATAACACG
GCAAGCATTAAAATAATTTTACACCCAAGTGTCAGTGACCTGGCCAGATC
CGTCACTGTAAATAACCTGTCGGAAAGAATTGCCCAAAGTGAGCTAAATG
AGTAACGCCAGTCAAAATTGATTTAAATTTCAAACCCAGTCAAATTGTTC
TCTTCCTTAATGGTTGTGTCTCCTTCAGCATGTATCAAACCTTACTATTT
TGATGTATCTGACGAAAGTAGTAGGGTTTGAAAGTTAAGATTTTTATTTT
GAATTTTGTCCTTACGGTGGAAATTGAGGTATAATCTCCACCAGGTCATT
GAGACAGGGGTGTAATACGATGAAATCGATCAGTGATTTGATTTGAACTC
GATGCTTATTGGCTAGCATAAGCAATAAGTTTTTCTCAACAAAACTCATT
GAAGTTCTGTTATGATTCTTTTTGTTTGGCCATTTAGCTAACACCCTAAA
GAAATTCGAACACGTTCGATATTGACAACACAACTGTTAATGTTCAACAC
TCTTTCTTGTGTAGACAATCTTCCCTTTTTCTTTGTCTGGCGCAATTAAT
TTGAAATTGAATCTGATTGAAAAAAATCCAATTTTTCATTTTTTTTGTAA
AACGAAAAAATGAAACAAACGCACTCTAAAACACAAACTTCCCGCCAAGT
TAGTGCTCTAGAAATATTTTTTAGGAATTTTTTCAAGAAATCAAAACAAA
AATTCCAATTTTCTATAGTTAGTTTTTTTAGCAAAAAACGAAATGGAAAA
TTGGAATTTTTTCAATTTTCCATGTTCGTTTAAAAAGGAAAAATGAACTG
ACGGATAGGTACACGCATTGTCCCACATTTTCAGGTTGGATTTTCCATTG
GATTTTATCTTTTTTCCAACTAAGAAAACTTGAAATTTCCAACCTTGGAA
ATCGAAAATTTTTTCCTGTGATAAGCCTGAGTGGAGTATCATTTAACATA
CACGTTGTTTTTAATAGGAACAAACTTATAAAAACATACAGTAAGGCTTC
AACAGCCAACATATTAAGAACAAGTTAAGAACATTTTAAGGCTTTGCAAG
GAATACTTTATTTTAGGTTTAGAACTCAGAAAGCTAAGAACATTTGAGGG
CTTAAAAATTTTGTACTCTCGTGTAAAAAAGCCGTGTATGGTTTAATTCA
ATGATTTAACCAGACAAAAAAATTGTAAAGGGGTCTAAATTATACTTAAC
TTGGTTCACTCTAGGTTCAAAACACAGTAGTTCCAAAACTCGCAAAAAAA
TTTTAAACAGATCTATAAGAAAATCTATAAGAAGCACGAAATGTATTGAG
ATTTTCCTCGTTTTTCGAAATTTGAAGTTCGGGCGAGAGAGTCGCTTTTG
GGCTATCTGTTAAATGTAATCGGATATTTCAATTTGGGAGCGGCTCATAG
ACCTCCAGGTTGTATTATGAACCTTATTGGACAATTTTTTGGACTTTTGG
ATCCTCAAATCCTAAGGTGATAAGTCTTAAGTCTAGCGTTAAAACTCTGG
TTGTAGTATCAAAACCCACAAAAGTAGATACTCTATTAAAGTTTTATCAT
CATTTATAGAATCGAAGTTGAACTGTTGGCGATGCGAGGCTGATAAGAAA
TGGGAAGACTGTGATAATTGGACATCCACAACGTGTCAGGGTGACCAAAC
ACTATGCGGTTATTTCTATTCAAAACAAGGCACAGTGGAAACGTTCATGC
GTGATTGCGTGACTGAAGATTTCTGCAATAACAAACCCCCGTGCAAAGAT
AAAAAGTTGTCGTCGTGTAAAATCAAATGTTGCGATAAAGATTTGTGTAA
TGAAGAAATGGTTCCAGAATTTGTCGATGAAGAGCCAAAAGCGACCGAAC
TTTGAAATCCAATATCATAAACAATTTCATTACTCCCACAATTGAAAATC
CTCAAACCAAACAAACCCAACTGCCACACAACGTTTTTATTGTCTATGGC
AAGTCCATGACGTATATAAAACGTTGGATAGACATTAAAAACATTATATT
TGATTTAGTTCCTGTTTTTGTTAACCTCGTAAAATATATAAGGAATTACC
GCGATAGAGTGACAGCCCCTAAATTATGAGTAAGATAAAATGTAGATATT
TAATGTTATTTTTTTTTGTATCTGACAGTCGATATTGTAAAATTAAAACG
AAAAAGTAAAACGAGTTCAAATAAAAATAATGTCTCCAGAG Coding sequence (CDS) from alignment at sc0000006_pilon:1390604..1396044- >MSTRG.1297.1.p1 ID=MSTRG.1297.1.p1|Name=MSTRG.1297.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=708bp|location=Sequence derived from alignment at sc0000006_pilon:1390604..1396044- (Clytia hemisphaerica_ch_hm2_pilon)
AATCGAAGTTGAACTGTTGGCGATGCGAGGCTGATAAGAAATGGGAAGAC
TGTGATAATTGGACATCCACAACGTGTCAGGGTGACCAAACACTATGCGG
TTATTTCTATTCAAAACAAGGCACAGTGGAAACGTTCATGCGTGATTGCG
TGACTGAAGATTTCTGCAATAACAAACCCCCGTGCAAAGATAAAAAGTTG
TCGTCGTGTAAAATCAAATGTTGCGATAAAGATTTGTGTAATGAAGAAAT
GGTTCCAGAATTTGTCGATGAAGAGCCAAAAGCGACCGAACTTTGAATGG
ATTTGCATTTGGTATTGAGCGTTTTGTTGTTTTGTATCTACGTCCATTAC
ACAGAATCGAAGTTGAACTGTTGGCGATGCGAGGCTGATAAGAAATGGGA
AGACTGTGATAATTGGACATCCACAACGTGTCAGGGTGACCAAACACTAT
GCGGTTATTTCTATTCAAAACAAGGCACAGTGGAAACGTTCATGCGTGAT
TGCGTGACTGAAGATTTCTGCAATAACAAACCCCCGTGCAAAGATAAAAA
GTTGTCGTCGTGTAAAATCAAATGTTGCGATAAAGATTTGTGTAATGAAG
AAATGGTTCCAGAATTTGTCGATGAAGAGCCAAAAGCGACCGAACTTTGA
ATGGATTTGCATTTGGTATTGAGCGTTTTGTTGTTTTGTATCTACGTCCA
TTACACAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000006_pilon | genome | sc0000006_pilon:1390604..1396044 - |
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