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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000100_pilon:897215..905064+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12964.1.p1 ID=MSTRG.12964.1.p1|Name=MSTRG.12964.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7850bp|location=Sequence derived from alignment at sc0000100_pilon:897215..905064+ (Clytia hemisphaerica_ch_hm2_pilon)
tgaaGTATTACATGATAGGGTATAAAAGAGACAAAAGGGCGAATGTCAGT
TAGTAAAAGAACTCATGCTAATGTCATTGCGAGTGAGACCAACATTTTCA
GTTGTTAAACACAAGTGATCAAGTTGTTAACTGGCTGAGATCTTTATATG
TATGTCATTTCCTTTGTAGCGGATCTCCATACAATTTTTATACATTACAT
GTGAAATAATTATACAAAACCACGGCAAAACGAGGAGAAGCAATTCGTTT
AGTCGATTTATCACGCTCACTTCAATCTTTAAGTGGTCCTTAATAGCATT
GAGTAGTCTACGCATATTTTTGGCAACAGCACTCTGGCGCGTATAAGTGG
AAGGATGGCATTTATATTGTAAaattatatttcgttgttttggaggcttt
ttatttttattgggAGCCGTTTGTGCAGAATATTTTCTACAAGATGGGTA
CATCAGATAGTGAGATGTTGTATCATATTTGTGGAAGGATAGCTTATCCG
GTGAAGGTAACCATTTAATAAACTCAGTCTTTTTAAGGCTTATTTTGCTA
ATCGGAAAAACGTATGTTTCACTGAAATGACCCGTGAAACGATCAAAATT
CCCTGAGGAAAATTGGTCACAGTTGGGAATACTACAGTTGCAGTTGTACT
GTACTAGATAAAATTGTGCATGCAATTTTCGGGGCGAGAGTAAATCTGGA
ATTTACGAGGAGGAAACTGAGAGTAAAGATTGATGAGCCACGGGTTGAGG
AAATTTAGGTATGAACCCACTTGCAAGGTTTTCATCCATTGTGAATTTGT
GAATTTGAGATATGTAGGTGAAAAGACGGACGCGCAACATTTAGTTGATC
TAAAGCTATTCTCACGCATCCTTGAATCACATACAAAAATTCCAGAAACA
TTATTCAGGCTATTCAAAGTGCATTTTCGATCTGTTAATGTAATGAGAAG
GATAATTAGAAAACCATCAATATAATTCATCCTTAGAAAAACTCATCGAA
AAGCTCGTGATCGATACATCTCTAAACAATTAATAAATTTCAAGTGTAGA
AGGCATGCTATCAAAAGCTATTAAGTTAGATCCAGCCAACTCGTTAAAAG
TAATTGGAAAGTATCATTAAATCAGACCACTGTTAAATACATCTGTTTCT
TGTAGAAATTCTTTCCAATCATTTCCGTAACTTTAGAACTTTAACTGATG
ACCATTACATAATATAAAGATTTCCGTTAAAACTTatcaacacccctgtc
tcacagccctggtgaaactttttcctacatCGGGCGTAAAAGtttcgatt
gaaatctcaatggggataaaaaatctattgttccaagattaaaaaatcca
gtggcgatggttttggagtgctaTTTCTataaacaatgaatttcgaatgt
ggatgaaatcaaagtcaatttctcagtggggctgaaattcaagggtattt
ttcccaccggggacaaaatttttgccaaattttccagtggagctGGGGCC
CCAGCGGGACTGTAACACAGGGATGCTTATCAATACAACAGATTCCCGCT
AACCTTTGAGCCTAGTGATTGCGAGAGATTGATACACCAACGAATTAGGG
TCTCGAAGACAACGCTGTCATCACGCTGCAGTTAAGTAAACTAGTCAAAA
AATCTGACTCTGATTCTTTTCTGCTATACTCTGGAACATTCTTTGTTTCT
TGATTGACGTGGTATAGATAATTCCCAAAATTCATTACGCCtaataaaag
aaatactttaTTGAGATTTCTAACCCAATAAAAATACGTACACAGAAAAC
TATGCTCTCCTGGCGACCAAATTTGCTGTTGAAGCCATCGCCATCATAAA
AATCCGAAAGATTGGATTTAGAAAACGAGTTTTCGTCGCCAGAGGTTTCT
GGGCTAATATTAATGTCACAACCTAGATAACAGTAGTCTAAATGGCAGAC
CTCTACAAcatccaacattggaaaatcatgttggatgaaatgttggactg
gtttgcccGGCCCCAactatagttttttttttttcaaagaaataattCTG
GCAAAGAAATAAATatgtattttttatgaaaaattattcGTTGTGTATTT
TGAAGGAAGCAATTTGCGTTCTTTCCACAAGGAAAGTAGTTTTTGTGCTG
TTAAAGGAAAAATAATAGGTcctaatttttaagaaaaatctatgaaaaga
aTTAGtgaattttcaaaggaaaatacttcgtgtgtattttcaaaggaaaa
aaatataaaaagaaaatgcttGGTGTGTATTTTTCgaggaaaaacaaatt
tcagtGCTGTTTGAGCTTTAAAAGAAAATACTCAGTGTGAATTGTTGAAG
GAAcataattcgaatatttttcaatgaaaaacacAATAATTTGTGTGTAT
TTTTCGAGGAAATGAAATGTGTACTTTTAGTAGATTCTCGATTGGTCGTC
ACAGGTCGGAATATGATTTAGTGGAAAATgctgtaaatatttcttcggAA
CGAAAGCTGAAAGTCTTTTGCCCatatagaaataaattttttatactCAA
TAACTTTGCTGTTTGGTTTTTGCAAGCAAAATCGATAAAATCATGCTCGC
GTGAGTAGTTATTTGCAGTGAAAACACTTGagtgtaatacattttttgag
agaaaaaacctcattttctttcaaaacatcTTACTGAACAAATCAAACAT
TTGGTATCAAATATCACTTCAAAAAACCTCAAAACGATTAATATTTAATT
TGATCTCAATAGctttttgtttaatttgtttGGAATGATAATAAAAAGCc
aattttcttccatttttctCGCCGGGTGTCGTGGCGTGCATCTGTAATCC
AGCTACTAGGAGGCGAAACTCTCGGACGGCTTGAGTTCGGGACCACTATC
GTGCAGTTGTCTATGTCGATCAGGCGTCCACACTAAGCTCAGTGTCAACA
TGGTTATCATGCAGGAATGCAAGATACACCAGGTTCGATAATGAAGAACG
TACAGGCCCAGGGCGGAAACGCAGCAGGCAAAAGTTCTCGCAGTGAGCAG
TAGTGGGATAGCGCTTGTGAATAGGTGGTGTACGGTAGCCCGGACAAGAC
AGTCGAACGAAGCTTTTATTCAAAGCAATATTTTATAACAAACGCATCAG
TCAAGAAACAGCGACAATGAAATAACGAAACAGAATTTGaagaatttcat
aattttctttacAGTTCAGTACTtataaaaaattagatttaGTTTTCAAA
TGTTCATGTCTAAATACGTCGATATCTTTTAAACGAGGTTCATGGCGCTG
TCGACAacattttagaaatttcttgaatttttgcagTTTCGACTCTTTAA
CATCATAAGGTCCTGGACATCTCTTatcaaacttcaaaactttttatttc
tttcaggCACAAAATGTGATATAAAGTTATAAGACTATAAGGTAGAACAA
AATCTACAGGCCCGGCAAGGAGGGCGAGAAAGTGCCTACTTcgcaacatt
aaaaaataacgtcgaattttaaaaagaacgacaaatttctgAGCCTTTCA
ACAAAGCGACTACGAATATAAAACACATAAAACAGCTAGTGTGAAGGTAC
ACGAGAATTTAGAGGACAATAATAGAGACCCCATACTCTAGTGGACATAA
GCGGTGACCCCTCGGTGACCCCGATCACACCGTTACGcttagactagcaa
gcgtctgccTTTCCTTTTATCTGACACCCAGGTGCAGAAATTTCATCGGG
TCAGCTAATGGTATCtgaaaggtttagattacggagtTTTGCAaaccgcg
tcaaggattttgcagcgggaggctCGGTAACCACGCCTTCGTTTTTGGGG
ATTGGCTACCGTGAGCACAGGCCGATatcatatattgacctgtgccgacc
accatccaagatcttggatgaagttcaaagttgatatttttattcccata
gttgaaaacacaactcaaaaatgtcatcaatgctttttaaaaagagtcag
tgatagagaatcgtaacataaagtctgtctatcatttcgattcaattaaa
gtaacATTTCAATAATtgatagtttagtaattactgttatacatttggga
atcatgtaaaagatttctttcgagagaaactcatttcaattacacttgga
ggtttctggggaattcgtaaatagtaaactacaAACTGcaatacagtctg
ctagacattaatatggtaatatttgctcttttcatctttgattatttcta
gagtgattagattgacacatgcgcgatagaatttctattattggtcttca
gaggttgatatattccccggggggggggggggtactagggcaagatgggt
tacggggatgctccgctggtcagggtaccttttctaacctccacgagtcc
caggtagggtcgcaaaaacaccaaaatagaaaaatcagtccctcgtaggg
tgcctttttttggaaaatttggggaaaaagtagaaaattttggaatttca
gtcccattcagggtcacttttttcgcaaatttcgagtcccacgtagggtc
catttttcgaacctcagcggagcacccccgtcggtcaacaagggtagtac
cccccgggatatattctttgaaaactcaacctctgatactcagggtaggg
aTTGGCGGGTCAGTCGAAATAATTTTAGGTTTACACGCAAGGGTAGGTTA
ACCCGACTGAGATTGCGGTATCAAAGGCTGACTATCAAtatctccgatgg
gaaattggcccactCCTTAGAGCTTTAGAGTgagcggccgccaatccgcc
attgAAATATCAGATAATTACTGACTTAGCTGTTCACTTCGTATCAGTTT
GAATCgtagaattttatatacatttataaacattacatatacataaaata
tttcaacttcttgtaggaagaaccaatatacttttggagatcaagaaatt
aatgatgaaaaaagaaaaaagaaaaaaaagataaactttcCGTGTACCAG
GAATGCGGGAAAAGTGCTTGCCGCGtgagagtggtttggaaagcCACTAG
TTGTATGTATTCAGTGAACGTAGCGAGCCCATTGCAAACTAGGCTTCTGT
ATACTCCAGCTTCTTATAGAGGAAgtatatctttaaaaatttctatGCAA
GCGTAAGCTACATTGAACTACagcgacgtggtttactaggcTACATCACG
CcgaaaaaatgtcttttcaccCCATCAAACCAAAACAATTCTCTAGTCAA
ACACTTGGCTGCACGCACCCTCTCTGGTGTTTAGATATAAAGCCTAGTCA
ATCACTGGGTCAATCAAGCATCACGCTTAACTCATACTGTACCGGGAGTA
ACGCCAAAAATAGGCCGAACCACGGAGAGGGAGAGCCTTGTAAGGGACTA
CAGTTTTGTAAAGACAATATATCAGATACATGCACTTTACGGTTTCCCCT
TACCTATTCCGACAAAACATTTTGATATTCTGCATTTCAGCCTCCAGTTG
GAACAGTTCGACTCGTATTTTTCCGTTCTTTTACAATCCTCTTCACATTG
CTAACGTTGATCTTAACATATTTATCATTGGTGTTACAACCATGGAAAAT
CGAATCTGTGGGCGAACGTGCTTTAGAATTTGGTGTTTGGCAGATCTGTA
AATTTGACTTCGATGATCCGCCCATTATTCAATGTTTCACAAAGTTTTAC
CAAGACGCTGAAGAAGATAGTAagtacaaattttttaaaaaaaaaatatg
ggaataagAAATCACCAGAAATCAACATCAATCTCGCTTTTGGAAACGGC
AGCCTCTCTCTCATACGAATccaacttcataaaaattaattttcttagTA
AATATTAAATCAAAAGAAGTCAGGATTTGAGCTGCGATTATATCACCAGG
CTTTCCCTCACAAGCTAAGTATttgaaaaatctattttctgAACTGAAGA
AGTTATAAATTAGGGGATGAACAGAATTCtcgatgattttaaattttcag
tgtGGTTTCAAGCATTTCGGTACATGATGCTGACTGGTGCAATCATTCAA
TTGGTCAATCTAATAGCCATGATTGCACTCACCACGTTCAAATCTGACAA
ATATAAAAAGCCATGGCCAATCTTCTCATATGGATTTCTAATAGCAGGTA
AGAGATTAACAACATTATTTGTCGTAAAGAAAACAATGCAACAGTATATT
TGAGGCAAATTTCCGGTTAATTTGAGGAATTCtgatttcctgaaaaagaa
GGTGGTAGGTGGTTAAGGTTGAGGCGCCATCTTCagatcaaaaaaatata
aaatagatTTACTATTTACTAGATCAGATTTACAAAATGATAGAAAGCAG
TCTTTCTTGAATTGAATATTGAATTACCCCATAGCGAGGCAGACATTGAT
GATTTCTATTGAGGTCATTTTTGAGGATAAGAGGCATATGAGGAACTCGT
TTATTATCATACCATCTAGGTGCGTTATCCTTTGTTGCATTGGTCTTGTT
CGACATTGAGTTCGAATTTGCGTTCGCAGAAGACGCTCGCGTTCTCATGG
ACTGGACAGAAGAAACTGACATAGAAGAAAAATTAGGGTGAGTTTTAATT
GATTCTCACTCTTTTCCTTGATTTTTCAGAGACTTATGAAAGGTCGAATA
AGTGAGGTTTTCCAATATATATATAGAGTTTTTCATGGGAAGAAATAGAA
TCTTTTTATAAATaacgtactcttaggttccaaataaacagccccccccc
gcttttccaaccccccggaccttattaggatccccccgtttattaatttt
aagaatattttcaggtgtcaaagagaaggccccttattttgctcttgaaa
gcctgattttagcctatatttaccttattttggggttttcagaagtacaa
tttccaacccccccgtttattcgaacccccctgtttatttggaacctaag
agtatgtgAAAATATCATTCATTGTTCATATTCttctcaaaaaacaacaa
actttttccgttgaagagaaaagaaacatcAGTTTTAATGATGACATGTG
CATTTGATTGACAGAAGCTTTCTTTGATTGACGTATgagttttgattgac
agatgaGTACTTTGATTGACAGTTATGATTAGAAGATTGAATTAATCAAA
ACACGATTTGCAATATAAATTAACAAATCTGAATACCTTACAGCCTCAAC
AAATCTAATCTCGCCGTATctccttttccttttctttctaGATACGTGTA
TATTTTAGCCTGGCCGACAGTCGGTTTGGTCTGGATCAACAGCTATTTAT
GCTACTACACAAAATGCATCGAAGATAATTACAACGAACGAGGAATACAC
TTCAAACTGTTAGAAAATAGACAACTTCGGAAAGACCATAATACAGGATT
TCTAGAAAAcggaaatgaaaataataacGGACATCTATAGTGTCGATGGT
GTATAGTGCACCAGCATGGATTTTTCTATTGTTGCAGCAAATAATTATCC
ATCAGAGATGATAAATATGATATTTGGATGAATGATCTAAAGAGACATTG
AAACTCCCTGCTGGCTGAGCGTGCATCCAGATAATTCCAACTTTCATAAC
ATAAATGGTGATGGACCGAAATCTTAAACAGGTGAATtaaaaatacttca
aatatgTACAATAAAGTATGTAGGTACAATAAAGTATGGGAGTATATTAT
AGTTGTACGAAACAAGAAGTTCCTTGAAAGTAgcgtttatttttttcatt
ttataactACATGTAGCTTTTGTAAAAATTCTATTCGTTTTCAGAATACT
GACTCATACAAATTCTTTATTAAAGACATACATATCTTACAGTCTCCATC
Coding sequence (CDS) from alignment at sc0000100_pilon:897215..905064+ >MSTRG.12964.1.p1 ID=MSTRG.12964.1.p1|Name=MSTRG.12964.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3780bp|location=Sequence derived from alignment at sc0000100_pilon:897215..905064+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGTACATCAGATAGTGAGATGTTGTATCATATTTGTGGAAGGATAGC
TTATCCGGTGAAGCCTCCAGTTGGAACAGTTCGACTCGTATTTTTCCGTT
CTTTTACAATCCTCTTCACATTGCTAACGTTGATCTTAACATATTTATCA
TTGGTGTTACAACCATGGAAAATCGAATCTGTGGGCGAACGTGCTTTAGA
ATTTGGTGTTTGGCAGATCTGTAAATTTGACTTCGATGATCCGCCCATTA
TTCAATGTTTCACAAAGTTTTACCAAGACGCTGAAGAAGATAtgtGGTTT
CAAGCATTTCGGTACATGATGCTGACTGGTGCAATCATTCAATTGGTCAA
TCTAATAGCCATGATTGCACTCACCACGTTCAAATCTGACAAATATAAAA
AGCCATGGCCAATCTTCTCATATGGATTTCTAATAGCAGGTGCGTTATCC
TTTGTTGCATTGGTCTTGTTCGACATTGAGTTCGAATTTGCGTTCGCAGA
AGACGCTCGCGTTCTCATGGACTGGACAGAAGAAACTGACATAGAAGAAA
AATTAGGATACGTGTATATTTTAGCCTGGCCGACAGTCGGTTTGGTCTGG
ATCAACAGCTATTTATGCTACTACACAAAATGCATCGAAGATAATTACAA
CGAACGAGGAATACACTTCAAACTGTTAGAAAATAGACAACTTCGGAAAG
ACCATAATACAGGATTTCTAGAAAAcggaaatgaaaataataacGGACAT
CTATAGATGGGTACATCAGATAGTGAGATGTTGTATCATATTTGTGGAAG
GATAGCTTATCCGGTGAAGCCTCCAGTTGGAACAGTTCGACTCGTATTTT
TCCGTTCTTTTACAATCCTCTTCACATTGCTAACGTTGATCTTAACATAT
TTATCATTGGTGTTACAACCATGGAAAATCGAATCTGTGGGCGAACGTGC
TTTAGAATTTGGTGTTTGGCAGATCTGTAAATTTGACTTCGATGATCCGC
CCATTATTCAATGTTTCACAAAGTTTTACCAAGACGCTGAAGAAGATAtg
tGGTTTCAAGCATTTCGGTACATGATGCTGACTGGTGCAATCATTCAATT
GGTCAATCTAATAGCCATGATTGCACTCACCACGTTCAAATCTGACAAAT
ATAAAAAGCCATGGCCAATCTTCTCATATGGATTTCTAATAGCAGGTGCG
TTATCCTTTGTTGCATTGGTCTTGTTCGACATTGAGTTCGAATTTGCGTT
CGCAGAAGACGCTCGCGTTCTCATGGACTGGACAGAAGAAACTGACATAG
AAGAAAAATTAGGATACGTGTATATTTTAGCCTGGCCGACAGTCGGTTTG
GTCTGGATCAACAGCTATTTATGCTACTACACAAAATGCATCGAAGATAA
TTACAACGAACGAGGAATACACTTCAAACTGTTAGAAAATAGACAACTTC
GGAAAGACCATAATACAGGATTTCTAGAAAAcggaaatgaaaataataac
GGACATCTATAGATGGGTACATCAGATAGTGAGATGTTGTATCATATTTG
TGGAAGGATAGCTTATCCGGTGAAGCCTCCAGTTGGAACAGTTCGACTCG
TATTTTTCCGTTCTTTTACAATCCTCTTCACATTGCTAACGTTGATCTTA
ACATATTTATCATTGGTGTTACAACCATGGAAAATCGAATCTGTGGGCGA
ACGTGCTTTAGAATTTGGTGTTTGGCAGATCTGTAAATTTGACTTCGATG
ATCCGCCCATTATTCAATGTTTCACAAAGTTTTACCAAGACGCTGAAGAA
GATAtgtGGTTTCAAGCATTTCGGTACATGATGCTGACTGGTGCAATCAT
TCAATTGGTCAATCTAATAGCCATGATTGCACTCACCACGTTCAAATCTG
ACAAATATAAAAAGCCATGGCCAATCTTCTCATATGGATTTCTAATAGCA
GGTGCGTTATCCTTTGTTGCATTGGTCTTGTTCGACATTGAGTTCGAATT
TGCGTTCGCAGAAGACGCTCGCGTTCTCATGGACTGGACAGAAGAAACTG
ACATAGAAGAAAAATTAGGATACGTGTATATTTTAGCCTGGCCGACAGTC
GGTTTGGTCTGGATCAACAGCTATTTATGCTACTACACAAAATGCATCGA
AGATAATTACAACGAACGAGGAATACACTTCAAACTGTTAGAAAATAGAC
AACTTCGGAAAGACCATAATACAGGATTTCTAGAAAAcggaaatgaaaat
aataacGGACATCTATAGATGGGTACATCAGATAGTGAGATGTTGTATCA
TATTTGTGGAAGGATAGCTTATCCGGTGAAGCCTCCAGTTGGAACAGTTC
GACTCGTATTTTTCCGTTCTTTTACAATCCTCTTCACATTGCTAACGTTG
ATCTTAACATATTTATCATTGGTGTTACAACCATGGAAAATCGAATCTGT
GGGCGAACGTGCTTTAGAATTTGGTGTTTGGCAGATCTGTAAATTTGACT
TCGATGATCCGCCCATTATTCAATGTTTCACAAAGTTTTACCAAGACGCT
GAAGAAGATAtgtGGTTTCAAGCATTTCGGTACATGATGCTGACTGGTGC
AATCATTCAATTGGTCAATCTAATAGCCATGATTGCACTCACCACGTTCA
AATCTGACAAATATAAAAAGCCATGGCCAATCTTCTCATATGGATTTCTA
ATAGCAGGTGCGTTATCCTTTGTTGCATTGGTCTTGTTCGACATTGAGTT
CGAATTTGCGTTCGCAGAAGACGCTCGCGTTCTCATGGACTGGACAGAAG
AAACTGACATAGAAGAAAAATTAGGATACGTGTATATTTTAGCCTGGCCG
ACAGTCGGTTTGGTCTGGATCAACAGCTATTTATGCTACTACACAAAATG
CATCGAAGATAATTACAACGAACGAGGAATACACTTCAAACTGTTAGAAA
ATAGACAACTTCGGAAAGACCATAATACAGGATTTCTAGAAAAcggaaat
gaaaataataacGGACATCTATAGATGGGTACATCAGATAGTGAGATGTT
GTATCATATTTGTGGAAGGATAGCTTATCCGGTGAAGCCTCCAGTTGGAA
CAGTTCGACTCGTATTTTTCCGTTCTTTTACAATCCTCTTCACATTGCTA
ACGTTGATCTTAACATATTTATCATTGGTGTTACAACCATGGAAAATCGA
ATCTGTGGGCGAACGTGCTTTAGAATTTGGTGTTTGGCAGATCTGTAAAT
TTGACTTCGATGATCCGCCCATTATTCAATGTTTCACAAAGTTTTACCAA
GACGCTGAAGAAGATAtgtGGTTTCAAGCATTTCGGTACATGATGCTGAC
TGGTGCAATCATTCAATTGGTCAATCTAATAGCCATGATTGCACTCACCA
CGTTCAAATCTGACAAATATAAAAAGCCATGGCCAATCTTCTCATATGGA
TTTCTAATAGCAGGTGCGTTATCCTTTGTTGCATTGGTCTTGTTCGACAT
TGAGTTCGAATTTGCGTTCGCAGAAGACGCTCGCGTTCTCATGGACTGGA
CAGAAGAAACTGACATAGAAGAAAAATTAGGATACGTGTATATTTTAGCC
TGGCCGACAGTCGGTTTGGTCTGGATCAACAGCTATTTATGCTACTACAC
AAAATGCATCGAAGATAATTACAACGAACGAGGAATACACTTCAAACTGT
TAGAAAATAGACAACTTCGGAAAGACCATAATACAGGATTTCTAGAAAAc
ggaaatgaaaataataacGGACATCTATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000100_pilon | genome | sc0000100_pilon:897215..905064 + |
|
