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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000100_pilon:683201..687247+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12948.2.p1 ID=MSTRG.12948.2.p1|Name=MSTRG.12948.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4047bp|location=Sequence derived from alignment at sc0000100_pilon:683201..687247+ (Clytia hemisphaerica_ch_hm2_pilon)
GACTCAAACTCATTAAAATGCCTAAAATCTCAAAGATAGCAGTTTTTGGA
GCAAAATCTGTGGGTAAAACATCCATTATTCAACAAATTGTTTATGGGAA
CTATTCTATTAATAAGGTAAACattcaattttgtatttcttttttcaact
tcatGCAATTGAAAGAAAGACAAAATAGTATTGTTGATATCTTGTCAATC
CTGAAATTTGAAAACCTAAAATGCACTTCTTTCCATTTAGCTTTGTCGaa
tgatattttaaaaataatctttttacTACAATAAGGTAATAAGATAAATT
GTTATTCATTCTTGTGTGTCATTGTATGGTTTGGAATTGGAGAGGTTCTT
TTTCACAgacgtttttttaaataataagtTTCCCATAACATTTACTTCAT
AGATGATGTATCCAACAATAGCTGATAGTTATGATGCATGGGTAGATGCG
GATCGTGgtcaaaaagaaagaattcgAATATATGACTTACAAGGCCAGGT
ATCTCTACTGCAATAATTTTGTGTAGGGGATATATCAGGGATACTACAAT
CTTTGACTAAATATTCTGGCAGAAATTCCTTTCCCTCCTTATATCAATGT
TGACACATGGAAGGCTGCCACCAGACGTACAAAATCCTCACATCAACACT
AATATTAGGGGGAAGGGATTTTCTAAGAATTGGCCACAATTTAAGTCACA
TATTGTAGATTTAGCCAaaggaatattttttatttaatacagCGAGGTTT
TATACATGAAGTTGGcttttttgttaaaatgttGATCTTTTTGCTTTACA
GGATCCTGATCCTAACTTCATCTCTCCATCTCATCATATTCAAATTGCTG
ATGTAAGCATTCTTTTCAATTGTAATTTTTACACCAATTTTCTGTGATGG
TGATCCtttttcaatttatattttaattcaTATCTAGGGCCTTCTTTAAA
ATGTTAACATGAGATTAAAAATCctctcaattatttttaatattcatcTA
TTATAAATGTATCCTATATTCGAAAACTCTCCTTGTAttaactttatttt
catttccagGCATTTATTTTGGTATTCAGTGTGACGTCCAAAACAAGTTT
TAGTGTTGtggaaaaattgagaaaagaaaTCGTAATATGTAGAGGGAAAG
ATGTAAGTCTAGTAGTCTATTTTTTATATCtctcagccaaaaaaaaaaac
tttatgtcTATACTTTAGACGATACTATCATCTGATACACGTATCatctg
atacacgttttttaacacccccttctcacagaaccgctaggatttttttc
agctaGTAGGGATAAAAATAGCAGACTAAAACTCTATGGGGATTGAAATT
TCCATGttttttttGGCTGGGCCTCTACATTCCATTAtcttcaagtcaaa
aaattcagtgggaatgggaAAAAGCATGGTATTTTGcattgaggattggt
ttatttgattctttttagtgggaacaaaaatttgagtaaaGTTTTCCACT
GGGGGcggtattttggccaatttttccagtgtgaacggctcccagtgggt
ctgtgagaaggggtgttttTATCATGATCTGATCATTTCAGGCTTGAATA
TTCCCAAGTCTTTATCTCAAAAGTATATTTATGTAGGTTAAACGTTCAAT
GTTTTGagttaaaaaacatttcaatacTGTACACCAAGTGTCTTTATTAT
AAATTTAAGTTTGAATTTGTAttgaataataaatttttttgcttgtcaTC
CCCAGGTTCCAATAGTTGTTTTGGGTACGAAAGTGGATATGTCAGAAACG
CGGGAATGTCAACATAACGAAGTCATGAAGTGGGCTGACCATGAAAAAGG
TTTGACTAGTTTTGTTTTATGAGCTCCGGaattatacagggtgtcccgga
AAAAAGCCTGTTTCAGAACGACTACAAGTAGTAAGACTTTTGTGTCTGTA
TGTCTAGTTTTTCTAGTTACAATGAAACAGAAACGCAATAAACTTATAAA
CATGATCAAATTATCAATTGTGTAATAAAACATTTCAATGTCTCTTTCAA
ACAAAGTATGAAAAGACATTAACGATcgcttttttctgggacaccctgta
tatctCTAAGCAACTCCAATTCCATAATAAGCACTGCCCGGCAGTGACAA
ATATCATATTTCTTATTACCCAACACGTCACTTACAAACAATCAATTTTA
TGAAAGTGTCATTGTAGAGAATTAGAGATGCATATCATGATAAGAAATCA
CTTTCTGTATTTTATTCGTTATCATGACAAATTTTAATTCATCCTTTCAT
TATTGATAGCTTGCAcaagaattaagaaaatttcactGACTAGATATAAT
GTTACGGGAGTATAATTAATTACGGGAGTCTATTCTCCATATCAGACTCG
ACAATATCCATGTTctaaaaaccttgaaatattGATTCAGAACCCAAGAA
TCCCGAACCTTGGCTGGTATCTTCATAAAGTGTTCTGCTTAGTTAAAGCA
TAAGAACAGGTAGCAAGCTATTTATCATTCGTTTTGTTTATCGGGAATTG
TAACCCAAGAGCTTGAGCACACTGTTCATGCAGTGAATCTGCAATctata
gacgatatcggatttagataaatgcaatgcattctggtttctagggactc
tcaaaggaattataatCTATTATAATTGATCTattataattcctttgaga
gtccctagaaaccagaatgcattgcatttatctaaatccgatatcgtcta
ttggtaTTCAAGCCATCTACTAAGTATCAGCGtatctaaatttttgattt
gactATTGACTACTACCCAAAATTTATTTATCTGAAAGACTTCACTTGAT
CTAAAATAAGTCTAATAGGTCTACTATATAATATCAGCAGCTAAATAATT
TCCGCATGCGATTATAAAGTGTCCAATTTTAGAAAAggtttttgtatata
tttatgTTTGATATGGAGTATCATATATTTTATATGTTAGTGAAATTATT
CGAAGTGTTCGTCGAAAGTCGAACAACATTACAAGAACCAATCATGTATC
TACTAAAGAAATTGCCCTTATCTGCAGGTATGTTTTagaatactttttaa
aataacaTTGCATCTTGTAAATGTTAATTTGAAGATTGGACCAAACGAAC
TTATTTGTTCGAGTAAGATCAGAGAAGGTTCTACTACTAGTAAAATCGAG
TGAAAAGGTGGTTCAGTAAGTTCGATTTAGCAGAGATGGTTGATGATGTA
TCTAATAAAGTTTGTTTTATAATCGTAACATATTTTTCTACTTTCTTTTT
AGGGAAACGAGGTGCGGATGTTAAACAAAAGTTATTTGGGCGTGGTCAGA
AATCGAAAGAGAGTAGTACTTCTTCTGAAtcgtgaaaatatgaaaatact
gACGTAGGTTTAAGTGACTTGCTCACTCTTAAGCATCATTATGGCATCAT
TATGACAAGCTCGAGCGTGCTTTGTGGATTACAAGTACATTGCTCGATCC
CAACTTGAATAAACGTTCATCTAGCGTTTAATTGACACTTCCGATTTGag
ctttcaatttttagtttgtcACCGCGCATGGATGGACATTCGAAGTTTCA
CTGGCTAAACTTAAATGATTGTTTGTTAGGATAAATGTAATTATAGTATC
CTTTCTTCGGCTTTTCCATTCTAAAAAACATTAGCAACATAATATTGTAT
GAGCTTGCTGCGAAAAGTACACTGTTCTACTATCGACAGAACTACGTGGA
TAATAGATATgcaatttcattttgtttttatttttatatccaaaatctgt
aaattttattttgtaaatagtgccgaattttGATATCAtcatctaaaaaa
aaaacagtaattaATTGTAACTGTAGATTCCtaaatctttgaaaagtgtT
CGGCCTTTGGGAGCACCTTGTTTACTGTTTTCCTTTTACTTGATCCGATa
gaataatttccaaaaaatatttaggtgAAGAAAATCAACACCATATTCGC
aaaaaaaGCTATCTAGGTCAAGAAAATATATTCTTGTAATCGAGCAG Coding sequence (CDS) from alignment at sc0000100_pilon:683201..687247+ >MSTRG.12948.2.p1 ID=MSTRG.12948.2.p1|Name=MSTRG.12948.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2916bp|location=Sequence derived from alignment at sc0000100_pilon:683201..687247+ (Clytia hemisphaerica_ch_hm2_pilon)
CTCAAACTCATTAAAATGCCTAAAATCTCAAAGATAGCAGTTTTTGGAGC
AAAATCTGTGGGTAAAACATCCATTATTCAACAAATTGTTTATGGGAACT
ATTCTATTAATAAGATGATGTATCCAACAATAGCTGATAGTTATGATGCA
TGGGTAGATGCGGATCGTGgtcaaaaagaaagaattcgAATATATGACTT
ACAAGGCCAGGATCCTGATCCTAACTTCATCTCTCCATCTCATCATATTC
AAATTGCTGATGCATTTATTTTGGTATTCAGTGTGACGTCCAAAACAAGT
TTTAGTGTTGtggaaaaattgagaaaagaaaTCGTAATATGTAGAGGGAA
AGATGTTCCAATAGTTGTTTTGGGTACGAAAGTGGATATGTCAGAAACGC
GGGAATGTCAACATAACGAAGTCATGAAGTGGGCTGACCATGAAAAAGAA
CCCAAGAATCCCGAACCTTGGCTGGTATCTTCATAACTCAAACTCATTAA
AATGCCTAAAATCTCAAAGATAGCAGTTTTTGGAGCAAAATCTGTGGGTA
AAACATCCATTATTCAACAAATTGTTTATGGGAACTATTCTATTAATAAG
ATGATGTATCCAACAATAGCTGATAGTTATGATGCATGGGTAGATGCGGA
TCGTGgtcaaaaagaaagaattcgAATATATGACTTACAAGGCCAGGATC
CTGATCCTAACTTCATCTCTCCATCTCATCATATTCAAATTGCTGATGCA
TTTATTTTGGTATTCAGTGTGACGTCCAAAACAAGTTTTAGTGTTGtgga
aaaattgagaaaagaaaTCGTAATATGTAGAGGGAAAGATGTTCCAATAG
TTGTTTTGGGTACGAAAGTGGATATGTCAGAAACGCGGGAATGTCAACAT
AACGAAGTCATGAAGTGGGCTGACCATGAAAAAGAACCCAAGAATCCCGA
ACCTTGGCTGGTATCTTCATAACTCAAACTCATTAAAATGCCTAAAATCT
CAAAGATAGCAGTTTTTGGAGCAAAATCTGTGGGTAAAACATCCATTATT
CAACAAATTGTTTATGGGAACTATTCTATTAATAAGATGATGTATCCAAC
AATAGCTGATAGTTATGATGCATGGGTAGATGCGGATCGTGgtcaaaaag
aaagaattcgAATATATGACTTACAAGGCCAGGATCCTGATCCTAACTTC
ATCTCTCCATCTCATCATATTCAAATTGCTGATGCATTTATTTTGGTATT
CAGTGTGACGTCCAAAACAAGTTTTAGTGTTGtggaaaaattgagaaaag
aaaTCGTAATATGTAGAGGGAAAGATGTTCCAATAGTTGTTTTGGGTACG
AAAGTGGATATGTCAGAAACGCGGGAATGTCAACATAACGAAGTCATGAA
GTGGGCTGACCATGAAAAAGAACCCAAGAATCCCGAACCTTGGCTGGTAT
CTTCATAACTCAAACTCATTAAAATGCCTAAAATCTCAAAGATAGCAGTT
TTTGGAGCAAAATCTGTGGGTAAAACATCCATTATTCAACAAATTGTTTA
TGGGAACTATTCTATTAATAAGATGATGTATCCAACAATAGCTGATAGTT
ATGATGCATGGGTAGATGCGGATCGTGgtcaaaaagaaagaattcgAATA
TATGACTTACAAGGCCAGGATCCTGATCCTAACTTCATCTCTCCATCTCA
TCATATTCAAATTGCTGATGCATTTATTTTGGTATTCAGTGTGACGTCCA
AAACAAGTTTTAGTGTTGtggaaaaattgagaaaagaaaTCGTAATATGT
AGAGGGAAAGATGTTCCAATAGTTGTTTTGGGTACGAAAGTGGATATGTC
AGAAACGCGGGAATGTCAACATAACGAAGTCATGAAGTGGGCTGACCATG
AAAAAGAACCCAAGAATCCCGAACCTTGGCTGGTATCTTCATAACTCAAA
CTCATTAAAATGCCTAAAATCTCAAAGATAGCAGTTTTTGGAGCAAAATC
TGTGGGTAAAACATCCATTATTCAACAAATTGTTTATGGGAACTATTCTA
TTAATAAGATGATGTATCCAACAATAGCTGATAGTTATGATGCATGGGTA
GATGCGGATCGTGgtcaaaaagaaagaattcgAATATATGACTTACAAGG
CCAGGATCCTGATCCTAACTTCATCTCTCCATCTCATCATATTCAAATTG
CTGATGCATTTATTTTGGTATTCAGTGTGACGTCCAAAACAAGTTTTAGT
GTTGtggaaaaattgagaaaagaaaTCGTAATATGTAGAGGGAAAGATGT
TCCAATAGTTGTTTTGGGTACGAAAGTGGATATGTCAGAAACGCGGGAAT
GTCAACATAACGAAGTCATGAAGTGGGCTGACCATGAAAAAGAACCCAAG
AATCCCGAACCTTGGCTGGTATCTTCATAACTCAAACTCATTAAAATGCC
TAAAATCTCAAAGATAGCAGTTTTTGGAGCAAAATCTGTGGGTAAAACAT
CCATTATTCAACAAATTGTTTATGGGAACTATTCTATTAATAAGATGATG
TATCCAACAATAGCTGATAGTTATGATGCATGGGTAGATGCGGATCGTGg
tcaaaaagaaagaattcgAATATATGACTTACAAGGCCAGGATCCTGATC
CTAACTTCATCTCTCCATCTCATCATATTCAAATTGCTGATGCATTTATT
TTGGTATTCAGTGTGACGTCCAAAACAAGTTTTAGTGTTGtggaaaaatt
gagaaaagaaaTCGTAATATGTAGAGGGAAAGATGTTCCAATAGTTGTTT
TGGGTACGAAAGTGGATATGTCAGAAACGCGGGAATGTCAACATAACGAA
GTCATGAAGTGGGCTGACCATGAAAAAGAACCCAAGAATCCCGAACCTTG
GCTGGTATCTTCATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000100_pilon | genome | sc0000100_pilon:683201..687247 + |
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