MSTRG.12935.2.p1 (mRNA) -

Overview
NameMSTRG.12935.2.p1
Unique NameMSTRG.12935.2.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000100_pilon:449901..451394+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.12935.2.p1 ID=MSTRG.12935.2.p1|Name=MSTRG.12935.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1494bp|location=Sequence derived from alignment at sc0000100_pilon:449901..451394+ (Clytia hemisphaerica_ch_hm2_pilon)
CTATCTTAAAGCTTTaaaacactgaattttctaCCAGACATCAATTGGAA
AACCACGAAGAAACAACGGATTGGTAAGGACATATACTGTAATTTCTATA
CTTGTGAATTTTTATTCGAGAAAAATGACATATTCGAAAATTATTATCCT
TAATATGCCATAAACAAGTATAAGTTCGTCCAGAGCTTGAGAGAAATAAA
GTAATTCTGCAATGCCAAAAcctcaaaatttattgataggTAGGATCGGA
AAGAAGGAAACTTTAGCTGGCTCGAAAGTGAATTTAACTGCTAACCTTCT
TGAAAGTAAATTTCTGAACTTTTTTACAGATCCAAAAAGATGCAGAACAT
TACAAGCCGTCTCTTTTCAATCACTTCTTTGGTGGCAAGAAGATCAACGT
TACCTTTCAAAGCCAACTTTCACTCGAGCATTATATTGGCTTCCGATACT
GGCTCAAAATATGCCATCAAACTCACCAGACTTTGCTAACCCTAAATGGA
TCAACAGACACAAATTCATGTTCAACTTTTTGGACATCAACGGTGACGGA
AAAATCACTTTAGATGAGATCGTGTCCAAAGCTTCGGATGATATTTGCGC
TAAACTAGACGCTACACCAGAACAAACCCAACGCCATCAAGATGCTATTG
AAGCTTTCTTCAAGAAGATGGGCATGGATTATGGCAAGGAAGTGGAATTT
CCTGAATTTGTCAAAGGATGGGAAGAATTGGCCAAACATGACTTGAAACT
CTGGTCacaaaacaaaagtactttAATCCGCGATTGGGGAGATGCTGTTT
TCGACATCTTCGATAAAGACGGTTCGGGCTCGATCAGTTTGGATGAATGG
AAAGCATACGGAAGAATCTCTGGAATCTGTCCATCAGACGAAGACGCTGA
GCGAACCTTTGAAATTTGCGATTTGGACAACAGTGGCAAACTCGATGTTG
ATGAGATGACCAGACAACATTTGGGATTCTGGTACACCTTGGACTCCAAC
GCTGACGGTCTCTATGGCGACTTTGTTCcttaaaactttgaaatgtCTTT
TTGTTACTGTTATATTAGatgaaattgtaaattttgtttATAAACCAATA
ATTAATACTTGAAATTAATTCATTAGATTTTATTGGGTGTGACATTTTTC
GCTTTCCAGAACTTAGGTGTAATAGTTTTGCAAAAAGATAATTCTTTGAG
AACGATTGTGTCTGACTGAAATTTGCCACGAACTTTgccaaaaacttttt
ctgactttttcgGACATTATAATATAATGGAATAAAGATGTCCTgggtga
aaaatttttgaaaaattaactagCAGAcgcccccccccggctattgggta
cccgagagtaggttggaaggatagagttttaacactagacttaacactta
ggaccttaggatctgaggatccaaaagttcaaaaatagtccaatgataag
gctcagaatatagcctggaagtctgccaacccctctcAAATTGa

Coding sequence (CDS) from alignment at sc0000100_pilon:449901..451394+

>MSTRG.12935.2.p1 ID=MSTRG.12935.2.p1|Name=MSTRG.12935.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=822bp|location=Sequence derived from alignment at sc0000100_pilon:449901..451394+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCAAAAcctcaaaatttattgataggTAGGATCGGAAAGAAGGAAAC
TTTAGCTGGCTCGAAAGTGAATTTAACTGCTAACCTTCTTGAAAGTAAAT
TTCTGAACTTTTTTACAGATCCAAAAAGATGCAGAACATTACAAGCCGTC
TCTTTTCAATCACTTCTTTGGTGGCAAGAAGATCAACGTTACCTTTCAAA
GCCAACTTTCACTCGAGCATTATATTGGCTTCCGATACTGGCTCAAAATA
TGCCATCAAACTCACCAGACTTTGCTAACCCTAAATGGATCAACAGACAC
AAATTCATGTTCAACTTTTTGGACATCAACGGTGACGGAAAAATCACTTT
AGATGAGATCGTGTCCAAAGCTTCGGATGATATTTGCGCTAAACTAGACG
CTACACCAGAACAAACCCAACGCCATCAAGATGCTATTGAAGCTTTCTTC
AAGAAGATGGGCATGGATTATGGCAAGGAAGTGGAATTTCCTGAATTTGT
CAAAGGATGGGAAGAATTGGCCAAACATGACTTGAAACTCTGGTCacaaa
acaaaagtactttAATCCGCGATTGGGGAGATGCTGTTTTCGACATCTTC
GATAAAGACGGTTCGGGCTCGATCAGTTTGGATGAATGGAAAGCATACGG
AAGAATCTCTGGAATCTGTCCATCAGACGAAGACGCTGAGCGAACCTTTG
AAATTTGCGATTTGGACAACAGTGGCAAACTCGATGTTGATGAGATGACC
AGACAACATTTGGGATTCTGGTACACCTTGGACTCCAACGCTGACGGTCT
CTATGGCGACTTTGTTCcttaa
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.12935MSTRG.12935Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12935.2.p1.exon1MSTRG.12935.2.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12935.2.p1MSTRG.12935.2.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000100_pilongenomesc0000100_pilon:449901..451394 +