MSTRG.12935.1.p1 (mRNA) -

Overview
NameMSTRG.12935.1.p1
Unique NameMSTRG.12935.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000100_pilon:449856..451394+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.12935.1.p1 ID=MSTRG.12935.1.p1|Name=MSTRG.12935.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1539bp|location=Sequence derived from alignment at sc0000100_pilon:449856..451394+ (Clytia hemisphaerica_ch_hm2_pilon)
gttaAAGATATAATACGTTATTGTGTTTTGGTGTCTCTTGGGAAACTATC
TTAAAGCTTTaaaacactgaattttctaCCAGACATCAATTGGAAAACCA
CGAAGAAACAACGGATTGGTAAGGACATATACTGTAATTTCTATACTTGT
GAATTTTTATTCGAGAAAAATGACATATTCGAAAATTATTATCCTTAATA
TGCCATAAACAAGTATAAGTTCGTCCAGAGCTTGAGAGAAATAAAGTAAT
TCTGCAATGCCAAAAcctcaaaatttattgataggTAGGATCGGAAAGAA
GGAAACTTTAGCTGGCTCGAAAGTGAATTTAACTGCTAACCTTCTTGAAA
GTAAATTTCTGAACTTTTTTACAGATCCAAAAAGATGCAGAACATTACAA
GCCGTCTCTTTTCAATCACTTCTTTGGTGGCAAGAAGATCAACGTTACCT
TTCAAAGCCAACTTTCACTCGAGCATTATATTGGCTTCCGATACTGGCTC
AAAATATGCCATCAAACTCACCAGACTTTGCTAACCCTAAATGGATCAAC
AGACACAAATTCATGTTCAACTTTTTGGACATCAACGGTGACGGAAAAAT
CACTTTAGATGAGATCGTGTCCAAAGCTTCGGATGATATTTGCGCTAAAC
TAGACGCTACACCAGAACAAACCCAACGCCATCAAGATGCTATTGAAGCT
TTCTTCAAGAAGATGGGCATGGATTATGGCAAGGAAGTGGAATTTCCTGA
ATTTGTCAAAGGATGGGAAGAATTGGCCAAACATGACTTGAAACTCTGGT
CacaaaacaaaagtactttAATCCGCGATTGGGGAGATGCTGTTTTCGAC
ATCTTCGATAAAGACGGTTCGGGCTCGATCAGTTTGGATGAATGGAAAGC
ATACGGAAGAATCTCTGGAATCTGTCCATCAGACGAAGACGCTGAGCGAA
CCTTTGAAATTTGCGATTTGGACAACAGTGGCAAACTCGATGTTGATGAG
ATGACCAGACAACATTTGGGATTCTGGTACACCTTGGACTCCAACGCTGA
CGGTCTCTATGGCGACTTTGTTCcttaaaactttgaaatgtCTTTTTGTT
ACTGTTATATTAGatgaaattgtaaattttgtttATAAACCAATAATTAA
TACTTGAAATTAATTCATTAGATTTTATTGGGTGTGACATTTTTCGCTTT
CCAGAACTTAGGTGTAATAGTTTTGCAAAAAGATAATTCTTTGAGAACGA
TTGTGTCTGACTGAAATTTGCCACGAACTTTgccaaaaactttttctgac
tttttcgGACATTATAATATAATGGAATAAAGATGTCCTgggtgaaaaat
ttttgaaaaattaactagCAGAcgcccccccccggctattgggtacccga
gagtaggttggaaggatagagttttaacactagacttaacacttaggacc
ttaggatctgaggatccaaaagttcaaaaatagtccaatgataaggctca
gaatatagcctggaagtctgccaacccctctcAAATTGa

Coding sequence (CDS) from alignment at sc0000100_pilon:449856..451394+

>MSTRG.12935.1.p1 ID=MSTRG.12935.1.p1|Name=MSTRG.12935.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=573bp|location=Sequence derived from alignment at sc0000100_pilon:449856..451394+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCATCAAACTCACCAGACTTTGCTAACCCTAAATGGATCAACAGACA
CAAATTCATGTTCAACTTTTTGGACATCAACGGTGACGGAAAAATCACTT
TAGATGAGATCGTGTCCAAAGCTTCGGATGATATTTGCGCTAAACTAGAC
GCTACACCAGAACAAACCCAACGCCATCAAGATGCTATTGAAGCTTTCTT
CAAGAAGATGGGCATGGATTATGGCAAGGAAGTGGAATTTCCTGAATTTG
TCAAAGGATGGGAAGAATTGGCCAAACATGACTTGAAACTCTGGTCacaa
aacaaaagtactttAATCCGCGATTGGGGAGATGCTGTTTTCGACATCTT
CGATAAAGACGGTTCGGGCTCGATCAGTTTGGATGAATGGAAAGCATACG
GAAGAATCTCTGGAATCTGTCCATCAGACGAAGACGCTGAGCGAACCTTT
GAAATTTGCGATTTGGACAACAGTGGCAAACTCGATGTTGATGAGATGAC
CAGACAACATTTGGGATTCTGGTACACCTTGGACTCCAACGCTGACGGTC
TCTATGGCGACTTTGTTCcttaa
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.12935MSTRG.12935Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12935.1.p1MSTRG.12935.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12935.1.p1.exon1MSTRG.12935.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.12935.1.p1.exon2MSTRG.12935.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000100_pilongenomesc0000100_pilon:449856..451394 +