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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000100_pilon:380160..383461- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12921.58.p1 ID=MSTRG.12921.58.p1|Name=MSTRG.12921.58.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3302bp|location=Sequence derived from alignment at sc0000100_pilon:380160..383461- (Clytia hemisphaerica_ch_hm2_pilon)
AAACAATAAGATTTGTTTATTGGTCACATGAGATTATCTTTCCTATCTGC
TGGGTACGCAGCAACAAAAATGTTTTTCTCTTCAAAGTGAATTTTATTGA
GGTCTAAAGATTTTTAAGAAAACCATTCCTTTCTATGATAAAGAAGAAAG
ATAAAGTTAAATTTAGAACCTGGTAGTATGTCAGTAGTATACTGAAGAAG
AGTTTTTCACTCAACTGGTTCTCAAGAAAATTACCCTAAGCGAAATTAAG
TATAGATGATATTTACACGTCTTACTCTGCCAACCATTCTTATATAACAA
TTTGAAATTAGATTAAAAAAACAAAAAACAATGGAAATTAAACAAATACC
AATCAACAATGAAGATTTACAGAGGTTCAACAGTGACTGTTATACATTTA
AAGAGCATCCCTTGAGTATGTTGGAACCATACCATCAAGTCTTTCCATCA
CTTTATATGGATCACCACAAATCATTTCAAGAAGCTGAAGTTTATGAAGA
TGATGTTTGGATTTGCACTTTCCCAAAATCAGGTTGAAATATTAACCAAG
GAGATTACTTGGTACTGATCTCTGAATTTGTAAAAGATAGATTAAGATTT
TCTGTTCTTTAACAAAATCATCACATAATAATTCATACAATTCACCATTC
ACCATTATTATTACTTGTTTCCCTTTTTATCAACAATTGTTATTTTTCAA
TTTTCTTTGAAAGGCCTAACAGGCAGGCAAAGATTGTTGACAAAAGTTTT
TCTATTTAATCTCTATTTTTTATGTTCTAGGAACCCGTTGGATGCAAGAA
ATTGTCTCTTGTCTGAGGAATGGCTTGGATTTTGAAAAAGCAAAATCAAG
TCCTCTAGGCTTAAGAGTACCTTTCTTTGAGTAAATATGTTTTTTTCGTA
TTTAAAGAAGTATTGGCTGAAATTCTTGGGCTGAACTAAATGGGAAATAT
CAAAACTGAAGATAAGATTGAAATAGATATTCAAAAGATTAACTTTCTTT
GTTGTCAATAAGCATCAATGGTCTACAATACATAATCTTTTCTCATTTTA
GTTTTTCAGCCGTCTCTTATAACGCAGAAAAGATGCTCAAAGCTTATGGT
TCTTCTTGCAAAACAGGAGCTGAACTTGTTAATCATACACTTCGACCAAG
GACCATAAAAACCCATCTCAGCTATGAAATGTTGCCTCCAAAGATTCATG
AAAAAGGTGCCAAGGTACCAGAACTTGTTTTTAGTTGATATACGGATTCA
ATTGAAACAGTTTGATTTTTTTATGTTAAAAATTCTCTGATTTTGATTTT
TTTAACCAATGCAAATGATTTCTATTCAGATGATCAATGTAATACGAAAC
CCACGTGATGTTTGTGTATCATTTCTCAACCATCATGTTCTGACAGAAAA
CTACACTGGTGATTTACAAACCATCGCAGAGATTATGTTACAGGATGTAG
GACCTATCTATGCACCTTTCTTTACACATATCCTGAGCTACTGGAACCAA
CGAGAAAATCCAAATCTTTTGATTGTTCACTATGAAGAGATGCAAAAGGA
TGTAACTGGTGAAAATTTCTTTTGAATTTGTTTTTAACGAGGTCTAATTT
TAACAGTTGAGCAGGGCATATAATGTTAAAATCTTTACATAGGTGTTTCA
GGTAAGAATCCAAAATGGGTTGAATACACTTATCACCCTTAGCGGAAATA
CCTTGAAAAGGTTTGGCAACGGCGTCAAGTTAAAAAGTACTCGTGTGAAA
ATTTAAGATAACTTAGTAGATTGAAATCTTTAACCATTTTCCAGGTGTCA
TCAAACGAGTGGCCAAGTTTATTGGTAAAGAGGAATATTCAGATGGTCAA
ATAGCAAAACTTGTAGAGCATACATCTGTGGATAAAATGAGAGCCAATCC
AATGGTCAATGTGACTGGACCAATTGATGTAATTATTTTAAAACCAATTA
ATTTGAAATGAGTCTGAGTAAAAGTTAAAAATTCTTTATGGATATTTTTA
ATCAAATTATGCTTTTAAGACTTAAGAATCAGGGGGGGGTGTACAGCTGC
AGGGTACATACCCACAGCCAGGTGGTTGTGTCTTATTTTGAATTTCATTT
ATTACCAGGTTCTATATTTGGGGTGGGTGGGCCATTTCAACTCATTTCAA
GTATCTGGTACTGATTTTGGTATTTGGTGGGTAAAATGGGTAAAAAATTA
TCAATTTTGGCAAATCCGAAAAAAATTCCATAAAAATTAGATTTCATTTT
AATTTCACGATTTTGGTGAGGTGAAATTGACTGCTAGGTATTACAAGGTA
CTTTTCCAGAGTTATTTAGCCATACTTTCCTTGGTGACCAGCTTCCAAAT
AGGGGGCGGAGGTCCAAAAAAAGTTGGTACCTTATACTATCTAAGATATC
TATTACAAATCTTTTTGAAAATCAGGTTTATTACCCCCTGTTGCAATTAT
ATTTCTAGTAAACAGCTATGGTATAGCCAGGTAGAGCTGGAGTTTGCTTT
ATTGAAAGAACGGGCTAATTATAGTCACATCCCTTTATTTGAATTGGATG
AATAAAACGTTTTAATTATTTTTTTTTAACCGTTGCTTCTTTCTTCAATT
TTAGAAACTAAAGGCAGCAATGAAGAATGAGCAGAAAGGGACTTTTATCA
ACACTGGAAAGACAGGAGGATGGAAAAACAAACTCACTGAAGAAACTATT
GAGAGGTTTAAAAAATGGGAAGAGAAATGGTTGAAAGACACTGGATTGTT
GTTTGTTTACGAGGTTTGATTTTTTTAACACATAATAATTTTTTTCATCA
CACATAAATTTTAGCAATTTTACGAAAAACAGTTTTTATATTTTTTTTAT
AGAAATTTTAAAAAGTTGGGCTACTATTATAAACTGGGCTTAGATTGATG
TTACACTTTATTTTTTAGATTCGTAAAAACCTTTCCTCTAAAGGTGACTT
TTTATTTTACCATGCTGTGACAGGTGCCTAATTATGGGGCTTTGTTTGTT
AATTTTTTTATATCCCCAAAATATTGATTTTTATTAAAGTTCATCACCTA
TACAGTGTGTGCCAAAAAAAGCAGATAAATTTAATTATAAATTATGATCC
TCATAAGTTATGCCAAACTGTATAATTCGTATAATTCGTATTTCAGTCTA
AAAAACCTGAATATTGATTGAACAGACAATTGTAATCTTATTTCAATTAT
TCTAAGCCCTTTTTTCAGGACACACTGTATAACTGAGTGCAAGACTTATT
TAGGTTTTCATGTAATATTAACATATTTTCAGTTGTCCTTCAATAATTTC
AT Coding sequence (CDS) from alignment at sc0000100_pilon:380160..383461- >MSTRG.12921.58.p1 ID=MSTRG.12921.58.p1|Name=MSTRG.12921.58.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5958bp|location=Sequence derived from alignment at sc0000100_pilon:380160..383461- (Clytia hemisphaerica_ch_hm2_pilon)
AAACTAAAGGCAGCAATGAAGAATGAGCAGAAAGGGACTTTTATCAACAC
TGGAAAGACAGGAGGATGGAAAAACAAACTCACTGAAGAAACTATTGAGA
GGTTTAAAAAATGGGAAGAGAAATGGTTGAAAGACACTGGATTGTTGTTT
GTTTACGAGGTTTGAGTGTCATCAAACGAGTGGCCAAGTTTATTGGTAAA
GAGGAATATTCAGATGGTCAAATAGCAAAACTTGTAGAGCATACATCTGT
GGATAAAATGAGAGCCAATCCAATGGTCAATGTGACTGGACCAATTGATA
TGATCAATGTAATACGAAACCCACGTGATGTTTGTGTATCATTTCTCAAC
CATCATGTTCTGACAGAAAACTACACTGGTGATTTACAAACCATCGCAGA
GATTATGTTACAGGATGTAGGACCTATCTATGCACCTTTCTTTACACATA
TCCTGAGCTACTGGAACCAACGAGAAAATCCAAATCTTTTGATTGTTCAC
TATGAAGAGATGCAAAAGGATGTAACTGTTTTTCAGCCGTCTCTTATAAC
GCAGAAAAGATGCTCAAAGCTTATGGTTCTTCTTGCAAAACAGGAGCTGA
ACTTGTTAATCATACACTTCGACCAAGGACCATAAAAACCCATCTCAGCT
ATGAAATGTTGCCTCCAAAGATTCATGAAAAAGGTGCCAAGGAACCCGTT
GGATGCAAGAAATTGTCTCTTGTCTGAGGAATGGCTTGGATTTTGAAAAA
GCAAAATCAAGTCCTCTAGGCTTAAGAGTACCTTTCTTTGAATGGAAATT
AAACAAATACCAATCAACAATGAAGATTTACAGAGGTTCAACAGTGACTG
TTATACATTTAAAGAGCATCCCTTGAGTATGTTGGAACCATACCATCAAG
TCTTTCCATCACTTTATATGGATCACCACAAATCATTTCAAGAAGCTGAA
GTTTATGAAGATGATGTTTGGATTTGCACTTTCCCAAAATCAGAAACTAA
AGGCAGCAATGAAGAATGAGCAGAAAGGGACTTTTATCAACACTGGAAAG
ACAGGAGGATGGAAAAACAAACTCACTGAAGAAACTATTGAGAGGTTTAA
AAAATGGGAAGAGAAATGGTTGAAAGACACTGGATTGTTGTTTGTTTACG
AGGTTTGAGTGTCATCAAACGAGTGGCCAAGTTTATTGGTAAAGAGGAAT
ATTCAGATGGTCAAATAGCAAAACTTGTAGAGCATACATCTGTGGATAAA
ATGAGAGCCAATCCAATGGTCAATGTGACTGGACCAATTGATATGATCAA
TGTAATACGAAACCCACGTGATGTTTGTGTATCATTTCTCAACCATCATG
TTCTGACAGAAAACTACACTGGTGATTTACAAACCATCGCAGAGATTATG
TTACAGGATGTAGGACCTATCTATGCACCTTTCTTTACACATATCCTGAG
CTACTGGAACCAACGAGAAAATCCAAATCTTTTGATTGTTCACTATGAAG
AGATGCAAAAGGATGTAACTGTTTTTCAGCCGTCTCTTATAACGCAGAAA
AGATGCTCAAAGCTTATGGTTCTTCTTGCAAAACAGGAGCTGAACTTGTT
AATCATACACTTCGACCAAGGACCATAAAAACCCATCTCAGCTATGAAAT
GTTGCCTCCAAAGATTCATGAAAAAGGTGCCAAGGAACCCGTTGGATGCA
AGAAATTGTCTCTTGTCTGAGGAATGGCTTGGATTTTGAAAAAGCAAAAT
CAAGTCCTCTAGGCTTAAGAGTACCTTTCTTTGAATGGAAATTAAACAAA
TACCAATCAACAATGAAGATTTACAGAGGTTCAACAGTGACTGTTATACA
TTTAAAGAGCATCCCTTGAGTATGTTGGAACCATACCATCAAGTCTTTCC
ATCACTTTATATGGATCACCACAAATCATTTCAAGAAGCTGAAGTTTATG
AAGATGATGTTTGGATTTGCACTTTCCCAAAATCAGAAACTAAAGGCAGC
AATGAAGAATGAGCAGAAAGGGACTTTTATCAACACTGGAAAGACAGGAG
GATGGAAAAACAAACTCACTGAAGAAACTATTGAGAGGTTTAAAAAATGG
GAAGAGAAATGGTTGAAAGACACTGGATTGTTGTTTGTTTACGAGGTTTG
AGTGTCATCAAACGAGTGGCCAAGTTTATTGGTAAAGAGGAATATTCAGA
TGGTCAAATAGCAAAACTTGTAGAGCATACATCTGTGGATAAAATGAGAG
CCAATCCAATGGTCAATGTGACTGGACCAATTGATATGATCAATGTAATA
CGAAACCCACGTGATGTTTGTGTATCATTTCTCAACCATCATGTTCTGAC
AGAAAACTACACTGGTGATTTACAAACCATCGCAGAGATTATGTTACAGG
ATGTAGGACCTATCTATGCACCTTTCTTTACACATATCCTGAGCTACTGG
AACCAACGAGAAAATCCAAATCTTTTGATTGTTCACTATGAAGAGATGCA
AAAGGATGTAACTGTTTTTCAGCCGTCTCTTATAACGCAGAAAAGATGCT
CAAAGCTTATGGTTCTTCTTGCAAAACAGGAGCTGAACTTGTTAATCATA
CACTTCGACCAAGGACCATAAAAACCCATCTCAGCTATGAAATGTTGCCT
CCAAAGATTCATGAAAAAGGTGCCAAGGAACCCGTTGGATGCAAGAAATT
GTCTCTTGTCTGAGGAATGGCTTGGATTTTGAAAAAGCAAAATCAAGTCC
TCTAGGCTTAAGAGTACCTTTCTTTGAATGGAAATTAAACAAATACCAAT
CAACAATGAAGATTTACAGAGGTTCAACAGTGACTGTTATACATTTAAAG
AGCATCCCTTGAGTATGTTGGAACCATACCATCAAGTCTTTCCATCACTT
TATATGGATCACCACAAATCATTTCAAGAAGCTGAAGTTTATGAAGATGA
TGTTTGGATTTGCACTTTCCCAAAATCAGAAACTAAAGGCAGCAATGAAG
AATGAGCAGAAAGGGACTTTTATCAACACTGGAAAGACAGGAGGATGGAA
AAACAAACTCACTGAAGAAACTATTGAGAGGTTTAAAAAATGGGAAGAGA
AATGGTTGAAAGACACTGGATTGTTGTTTGTTTACGAGGTTTGAGTGTCA
TCAAACGAGTGGCCAAGTTTATTGGTAAAGAGGAATATTCAGATGGTCAA
ATAGCAAAACTTGTAGAGCATACATCTGTGGATAAAATGAGAGCCAATCC
AATGGTCAATGTGACTGGACCAATTGATATGATCAATGTAATACGAAACC
CACGTGATGTTTGTGTATCATTTCTCAACCATCATGTTCTGACAGAAAAC
TACACTGGTGATTTACAAACCATCGCAGAGATTATGTTACAGGATGTAGG
ACCTATCTATGCACCTTTCTTTACACATATCCTGAGCTACTGGAACCAAC
GAGAAAATCCAAATCTTTTGATTGTTCACTATGAAGAGATGCAAAAGGAT
GTAACTGTTTTTCAGCCGTCTCTTATAACGCAGAAAAGATGCTCAAAGCT
TATGGTTCTTCTTGCAAAACAGGAGCTGAACTTGTTAATCATACACTTCG
ACCAAGGACCATAAAAACCCATCTCAGCTATGAAATGTTGCCTCCAAAGA
TTCATGAAAAAGGTGCCAAGGAACCCGTTGGATGCAAGAAATTGTCTCTT
GTCTGAGGAATGGCTTGGATTTTGAAAAAGCAAAATCAAGTCCTCTAGGC
TTAAGAGTACCTTTCTTTGAATGGAAATTAAACAAATACCAATCAACAAT
GAAGATTTACAGAGGTTCAACAGTGACTGTTATACATTTAAAGAGCATCC
CTTGAGTATGTTGGAACCATACCATCAAGTCTTTCCATCACTTTATATGG
ATCACCACAAATCATTTCAAGAAGCTGAAGTTTATGAAGATGATGTTTGG
ATTTGCACTTTCCCAAAATCAGAAACTAAAGGCAGCAATGAAGAATGAGC
AGAAAGGGACTTTTATCAACACTGGAAAGACAGGAGGATGGAAAAACAAA
CTCACTGAAGAAACTATTGAGAGGTTTAAAAAATGGGAAGAGAAATGGTT
GAAAGACACTGGATTGTTGTTTGTTTACGAGGTTTGAGTGTCATCAAACG
AGTGGCCAAGTTTATTGGTAAAGAGGAATATTCAGATGGTCAAATAGCAA
AACTTGTAGAGCATACATCTGTGGATAAAATGAGAGCCAATCCAATGGTC
AATGTGACTGGACCAATTGATATGATCAATGTAATACGAAACCCACGTGA
TGTTTGTGTATCATTTCTCAACCATCATGTTCTGACAGAAAACTACACTG
GTGATTTACAAACCATCGCAGAGATTATGTTACAGGATGTAGGACCTATC
TATGCACCTTTCTTTACACATATCCTGAGCTACTGGAACCAACGAGAAAA
TCCAAATCTTTTGATTGTTCACTATGAAGAGATGCAAAAGGATGTAACTG
TTTTTCAGCCGTCTCTTATAACGCAGAAAAGATGCTCAAAGCTTATGGTT
CTTCTTGCAAAACAGGAGCTGAACTTGTTAATCATACACTTCGACCAAGG
ACCATAAAAACCCATCTCAGCTATGAAATGTTGCCTCCAAAGATTCATGA
AAAAGGTGCCAAGGAACCCGTTGGATGCAAGAAATTGTCTCTTGTCTGAG
GAATGGCTTGGATTTTGAAAAAGCAAAATCAAGTCCTCTAGGCTTAAGAG
TACCTTTCTTTGAATGGAAATTAAACAAATACCAATCAACAATGAAGATT
TACAGAGGTTCAACAGTGACTGTTATACATTTAAAGAGCATCCCTTGAGT
ATGTTGGAACCATACCATCAAGTCTTTCCATCACTTTATATGGATCACCA
CAAATCATTTCAAGAAGCTGAAGTTTATGAAGATGATGTTTGGATTTGCA
CTTTCCCAAAATCAGAAACTAAAGGCAGCAATGAAGAATGAGCAGAAAGG
GACTTTTATCAACACTGGAAAGACAGGAGGATGGAAAAACAAACTCACTG
AAGAAACTATTGAGAGGTTTAAAAAATGGGAAGAGAAATGGTTGAAAGAC
ACTGGATTGTTGTTTGTTTACGAGGTTTGAGTGTCATCAAACGAGTGGCC
AAGTTTATTGGTAAAGAGGAATATTCAGATGGTCAAATAGCAAAACTTGT
AGAGCATACATCTGTGGATAAAATGAGAGCCAATCCAATGGTCAATGTGA
CTGGACCAATTGATATGATCAATGTAATACGAAACCCACGTGATGTTTGT
GTATCATTTCTCAACCATCATGTTCTGACAGAAAACTACACTGGTGATTT
ACAAACCATCGCAGAGATTATGTTACAGGATGTAGGACCTATCTATGCAC
CTTTCTTTACACATATCCTGAGCTACTGGAACCAACGAGAAAATCCAAAT
CTTTTGATTGTTCACTATGAAGAGATGCAAAAGGATGTAACTGTTTTTCA
GCCGTCTCTTATAACGCAGAAAAGATGCTCAAAGCTTATGGTTCTTCTTG
CAAAACAGGAGCTGAACTTGTTAATCATACACTTCGACCAAGGACCATAA
AAACCCATCTCAGCTATGAAATGTTGCCTCCAAAGATTCATGAAAAAGGT
GCCAAGGAACCCGTTGGATGCAAGAAATTGTCTCTTGTCTGAGGAATGGC
TTGGATTTTGAAAAAGCAAAATCAAGTCCTCTAGGCTTAAGAGTACCTTT
CTTTGAATGGAAATTAAACAAATACCAATCAACAATGAAGATTTACAGAG
GTTCAACAGTGACTGTTATACATTTAAAGAGCATCCCTTGAGTATGTTGG
AACCATACCATCAAGTCTTTCCATCACTTTATATGGATCACCACAAATCA
TTTCAAGAAGCTGAAGTTTATGAAGATGATGTTTGGATTTGCACTTTCCC
AAAATCAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000100_pilon | genome | sc0000100_pilon:380160..383461 - |
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