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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000006_pilon:1349433..1351488- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.1292.1.p1 ID=MSTRG.1292.1.p1|Name=MSTRG.1292.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2056bp|location=Sequence derived from alignment at sc0000006_pilon:1349433..1351488- (Clytia hemisphaerica_ch_hm2_pilon)
AATAAATTTTTTATATGATGTGATATATCAAATTTGATAAAAGGCTTGTG
ATAGATATTTGGTAGAAATGACATCGAAAATCACCATCCAGAAGATTTTC
ATTTTCATTTTTTCGGTGATATTTTGTATTTGTGGCGGTGTTAAATCATG
CTTAAAGGTAAAGTCAGCCAGTTTAATTTTATAAAGATGTTTTTTTAGGT
TTTAAAGTTCTAAATATATAGTGTCAATCTAGGTTAATAGCCAGTGCCAT
ACATAGGTATTTCTAAATTCATTGTTTAGTCTTTTTGGGCATACTACCTT
CAAAAATTAATCCCAAAATTTCAGGTATGGGTGGACCATACTACTATGGG
ACTACTATGTGTCCACAAATATTTTTCTACACGTTTTTTTTTTATTAGAA
CACCTAAAATTTGGCTGAGCCTGGGTGTGCTTATTTTTTTAGCAATTTTC
AGCCTAAAATGTTCTTAAATGCGTTCTTAATTTTTCAGACTACTCTAAAT
CGACAATATGATACAAAATAAAGAGCACTTAAATTTGGCAAAATTTGGAC
AATATTTGACTCTCGATTTTTGAAGATCCACCCCTAAATTCGGCTAAAAC
TGCTTAAAAAGAGGAAAAAATTGTAGTTTCTTGTCATTTTTTTCCAAACT
GAGGCTGCGCATGTTCTTAAGATGTTCTTAATTTTTCGACGAATTTCAGC
CTATATGTTCTTATAAACTAGGTTCTAATAAAAAAAAAAACGTGTAATTC
CCTTAAAGGATTCAATTCGTTTTGTTGGAAAAGCTCTCGAAAAAAAGCTG
TTTTTGCACTCCAAAGTGAAGAGTTTCACATTTGAAATGAATAAAACTAC
GGTATATAATTTTGATATTCATTTCAAGGCAAAACCACCAAACCGACACG
GTGTAGAACCAATAAAGTTCCTTCAAAATGGTAAGTTTTTCTAAGAAAAA
GTTGAATCGCTCAGTCGATTATACGTTCCACATTTACCGGATGCTTTCAA
AAAGGTACACTATGACCGGTTGGTCAGGGCTATTCTGAGAAATATTGCCC
AAGTTCAAGTAACGCCCGAGCTTGCGAGGCCGTTGCGTTAAAACTTTTTT
TTCCTAACGACGGGCAAATCTGTACAGCGTAGGCTCGTCGTTATGCGAAA
AAAAACCAATTGCATTGTGCAAAAAGCCGTGTTGTCCGCTTCGAGAAAGT
AACCGGTTAACAATGAAAGATACAGTAATTTGAACAAAGTGATGAAAAAT
ATATCGTCTCATTTACACTGTTAAGGTAATTTTCCATATAAGAATCTCAT
ATACCTATTCATAAAAACCAAACCCCGAAAAGAAAAAGTTGAAAGTTTGC
ACAAGTAAGTTTTTCCAGATATTCAAACACCCGGTTATTCGAAGTAAATT
CTTCCCCCTCCTCCTTTGAACTTAAAGAAACGGGAGTCGGTTGTACCTTT
ATACAATCATCCGTCTATTTTCATTTGGATAACGGTTAGCAACTTTTGCA
TTATCAAAAACAACGAAACAACGTGTTAAACAACTCTAGGTAAAAAGACA
TTATTAAAATGGATGTTGCCTTTTCATTTTCCAGAAATTCGTCTGACAAA
GGACAACAGAGTAGGCTATATACAACGGCTTTCGACAGAATGGAAAATCT
CCTTCAAACTCAAATACGTTGCCCACAACCCTCCATCGTATGGTACAAAC
ACTCTCTTCTTGAAAGGGACGTTCAACTATCCCGCAATACAGGGATACGC
TGGTACATCCAAGCTTGATATCACACACAGAATCTCTAGCGGTATAAATA
ATCGTTTTGTCTCAGATATACTAACACTAAACAAGTATTATTCGATAGAG
CTTGAGCAAAGATACATATCAAACGGTAATTATAAGTACTCGATCAAAAT
AGATGGGATCGAGAAACATTCTGTGATCAACAATGACGCTCAGCAAATTT
ACAATGTTGAGATCTATGCATCTCATCACACACGTATCCCTAGTCCAGCA
GATATGAAAGACCTTGAGATCACTAATTTTCTTTGATCGAATGAATTTAT
GAATTT Coding sequence (CDS) from alignment at sc0000006_pilon:1349433..1351488- >MSTRG.1292.1.p1 ID=MSTRG.1292.1.p1|Name=MSTRG.1292.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1782bp|location=Sequence derived from alignment at sc0000006_pilon:1349433..1351488- (Clytia hemisphaerica_ch_hm2_pilon)
AAATTCGTCTGACAAAGGACAACAGAGTAGGCTATATACAACGGCTTTCG
ACAGAATGGAAAATCTCCTTCAAACTCAAATACGTTGCCCACAACCCTCC
ATCGTATGGTACAAACACTCTCTTCTTGAAAGGGACGTTCAACTATCCCG
CAATACAGGGATACGCTGGTACATCCAAGCTTGATATCACACACAGAATC
TCTAGCGGTATAAATAATCGTTTTGTCTCAGATATACTAACACTAAACAA
GTATTATTCGATAGAGCTTGAGCAAAGATACATATCAAACGGTAATTATA
AGTACTCGATCAAAATAGATGGGATCGAGAAACATTCTGTGATCAACAAT
GACGCTCAGCAAATTTACAATGTTGAGATCTATGCATCTCATCACACACG
TATCCCTAGTCCAGCAGATATGAAAGACCTTGAGATCACTAATTTTCTTT
GAGCAAAACCACCAAACCGACACGGTGTAGAACCAATAAAGTTCCTTCAA
AATGATGACATCGAAAATCACCATCCAGAAGATTTTCATTTTCATTTTTT
CGGTGATATTTTGTATTTGTGGCGGTGTTAAATCATGCTTAAAGAAATTC
GTCTGACAAAGGACAACAGAGTAGGCTATATACAACGGCTTTCGACAGAA
TGGAAAATCTCCTTCAAACTCAAATACGTTGCCCACAACCCTCCATCGTA
TGGTACAAACACTCTCTTCTTGAAAGGGACGTTCAACTATCCCGCAATAC
AGGGATACGCTGGTACATCCAAGCTTGATATCACACACAGAATCTCTAGC
GGTATAAATAATCGTTTTGTCTCAGATATACTAACACTAAACAAGTATTA
TTCGATAGAGCTTGAGCAAAGATACATATCAAACGGTAATTATAAGTACT
CGATCAAAATAGATGGGATCGAGAAACATTCTGTGATCAACAATGACGCT
CAGCAAATTTACAATGTTGAGATCTATGCATCTCATCACACACGTATCCC
TAGTCCAGCAGATATGAAAGACCTTGAGATCACTAATTTTCTTTGAGCAA
AACCACCAAACCGACACGGTGTAGAACCAATAAAGTTCCTTCAAAATGAT
GACATCGAAAATCACCATCCAGAAGATTTTCATTTTCATTTTTTCGGTGA
TATTTTGTATTTGTGGCGGTGTTAAATCATGCTTAAAGAAATTCGTCTGA
CAAAGGACAACAGAGTAGGCTATATACAACGGCTTTCGACAGAATGGAAA
ATCTCCTTCAAACTCAAATACGTTGCCCACAACCCTCCATCGTATGGTAC
AAACACTCTCTTCTTGAAAGGGACGTTCAACTATCCCGCAATACAGGGAT
ACGCTGGTACATCCAAGCTTGATATCACACACAGAATCTCTAGCGGTATA
AATAATCGTTTTGTCTCAGATATACTAACACTAAACAAGTATTATTCGAT
AGAGCTTGAGCAAAGATACATATCAAACGGTAATTATAAGTACTCGATCA
AAATAGATGGGATCGAGAAACATTCTGTGATCAACAATGACGCTCAGCAA
ATTTACAATGTTGAGATCTATGCATCTCATCACACACGTATCCCTAGTCC
AGCAGATATGAAAGACCTTGAGATCACTAATTTTCTTTGAGCAAAACCAC
CAAACCGACACGGTGTAGAACCAATAAAGTTCCTTCAAAATGATGACATC
GAAAATCACCATCCAGAAGATTTTCATTTTCATTTTTTCGGTGATATTTT
GTATTTGTGGCGGTGTTAAATCATGCTTAAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000006_pilon | genome | sc0000006_pilon:1349433..1351488 - |
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