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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000100_pilon:317973..322774- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12919.2.p1 ID=MSTRG.12919.2.p1|Name=MSTRG.12919.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4802bp|location=Sequence derived from alignment at sc0000100_pilon:317973..322774- (Clytia hemisphaerica_ch_hm2_pilon)
AACGTATTCTGTTCGTAAATAGATTCTGAATCATAATCTTTTATAACTGA
ATCTTTTTTCTTTCATGAGAACAAAAGAAAATAATAGAAAAATTAATGGC
TATTTGGTATTGAATCTTCATGAAAATTAGAAAAGAAAGTAAGGTTTCAA
TATATTTTAACTCTAAAGTTACCTAAGATATCTCTCATTCATTCTAAATT
ACATAATTCAGCATAATTCTAAATATTTCTAGAATCTAGAAAATATTTGA
TATTTGAAGTGCGAAGGCGATAACTTTTTGTCCTTTTAATTTCAACCTTC
CTTCCATTTCCCCTTCATTTTCTCTCGTTTCTCTTTACAGGTTTTCAGTT
AGAAGTGAGATGTAGCTGTTCTTTCAAGATGGATGAGGTTATTTCTCTTC
GTTATTTCAAGAATTGTCTTCCACTCCACAGCTACATCGGCTCTGTTTTT
CATGCCCAAGAAATGTGCTTCATGTAGCGTACGAATATCCTCGTCAAACA
TTTTTTAAAGGGGACTTTGTATTGTTTTTTCGTGGGTTACTCTTTCCTCC
ATAAGACAATTATTATTACTTATAACAGGACTAAGAGACCACGTTTTTAT
TTGACCTAGAAAAAAAAATCAAATTTCAATTTCATATTATTTGAAAATGT
GGTTTAGACTTTAACTCAGTAATCCGATCAAAGTAACAGACAAATGAGTT
GAACGTCAAAAACACTGCTCTTTCTCTGTTGGAAAGATTATATCACATAA
CAAAAATTCACTCTTTCATCATTTATCATTTTTTAATCACTTTTTTATTT
GTTACAGCTTCGTTTGATAGACCGTGCTCTCAAGTGGTATTTATAAAGCA
ACTTTGATATTGAAAGGCCTCGTAGCTGCAAGAAGAACTCAATACAGCTT
CGACTTTTTCGCATGCAACCAGCAAACGGGATTAAAGAAAATCTTCACAA
CACCCACGCAGATAAAGAATCGTTGCAAATCATTTTATCTACCCTCCTAA
CAAGTAAGCAAATAAATTAATATGACTGGGATGAAGAAGCTTCGTTTAGA
GCATTCTTTACTTTTCGCGATGGTTTGAGTATAAAGATGAGGCATGGCAA
TCCCCTTCCTCGTTCACATGCTTATCGTCTTTTTGACGCATCAGCATTGC
ATCAAGTTGTTGCCAATGCATGTTAGCAACCATTTTAAATCCAATGTATA
TCTTATACAAAAAGCAGCGTCTGAACTCGGCATCAATTATTGATTACTGG
CGTCAAATTATTAAGTCGGTATGACAGAAATCAAATATAACTAAACTTCT
ATCATCCTGTTATTGTGTGTTAGGTGAGGTCTGTGTGCGTGTGTTCTGAC
TGTTTACCTGTTTCGTTAGCAACTGATCGAAAAGGGATCACGGTGGTCTT
TAAATTGCATACAATTCATATCTTTAATTCGCTTTCAATCTATTAAACGG
CAACTAATTATAGCACAGATTTTTCCTCCAGGATTTCTATTTTTGATTTA
TTGTTGTTTGATTGCATAAAGTGTGGGAAGATACCTCTATTTTCAAATCA
CCTTTCAAGTAGCTGTTCAGCTTAGTTCCTGTTCATCCAACCTGAGCTCA
GAATCTCATGTTGCTGACATTAATTTTTGCGACCGCTTTCGGCATGTCGG
CCAACTTAAGAAACGGAAATCTGTTAGAGAATGCCGAACGCTCAAAAACT
AGCCAGTCTGTTTAATAAGTTAGGAAGCATTCTAACGCAAAAAAATTTTT
CTCAATCAGATAATATTAGAATAACAAGTTTCATTACTTGAAGGATTGTC
TGAAAAGTTTTATTTTACTCATGATAAATCTACCCCGAAAATTGGATGGG
AAAGTCTATTTTATGATACGTTTCTATTATCATAGTAAGACTACTCAAAA
ACAAGAATGATGTATTGCATGTAAAGTACTTTTTGTTTTTCGTCCTCAGG
AACTCCCTACATTGTCGCCTGTCACTAGTTGTCCTCAATTCAATATCAAA
ACTTTACAGTGCATACTAAGCAAACAAATTCGTGAGAAATTTAAAAGTGC
AGGAAATTTATTTCGTATATTTATAAACAAGGGAGGTCCATCTTTTGAAC
GGTCACCATGACAATATTAACCAACTGACGTCAACATACTATCTTTTACC
TTATCTTTTAGTATTAATCCGCTTAAAAAGTTTTGAGACTTGTGAGACTT
TTCCAGCGCCAGGGTGTGTCCACTGAATCTGGCAACAATGAAGTTGGTCC
CATTCCCCATAACCTCTCGTTCAAGCATTTCTTCCTATTTTTTTATGGCC
TCCTAACTTCTGCTAGGGAAATAACAACTGAGATATATAATAAAAAAGCT
TTTCCTGTTGCATGGTTTGTTTTCATGGTAGGTGTCTCCAGTTTCCAAGG
TAGTTCAAATTATGAAAATGCGGTTCACTTTTTTTCCTTTCCTTATATTG
AAGCTTGTTAATCTGATCACACAATCATCTTATAATGGCATTTCTAATTA
TAGGTAATTAATTACGAAGAGAATTGGTATAAAAAGAGAGATGGAGAGAT
TGTTGGAACTCATTACGAAGAAAAGCATCGACGAGGATCTAACCACGATC
TTAACAAACATGTATAGCATCTCATCTATCGATTTCATCGAAGTTGGCAA
ATGGTTTTTGTTCTTGAACATACCAGCCATTGTTTTCTTATTCATCGTGA
AGAATCCAGTGGTCTTCTTAAAACTCTTTCTAAGGTGAGATTTCTCTTTC
TTTCTCCTCTTCTTCTTAACAGGATTTTGTTCAGCCCACGCTTGTAAGTG
GCATGAGAGAAAATTCTTAATCTTTGCTTTCTTGATAGCAACTCCAACCT
TGGAAATTCAAGCTTTGCAGAAGAACAACTTGCATTTAGCAAAAATATGA
TGCTAACTATATACAGATAGGCTACTTAATATCATACCTTAATTTCTTCA
CACGTTAATTAGCTATATTTCTCTTCAGTCCATATTTTATTGCACAATCA
TTTAATTGGAGAGGCTGGACTTGTTACCCTCTAGATAGTAACATACTTAA
ACCAAAATTCACGGTAGAGAAAAATCCCCACTAGATTGCAAGATCTACAC
AGCTAAAGGCTAAACACCACCTACAATGTTTCAATTCATTAATCTCTTCT
TCTTTTTTTTCTCCAATTCAGATGTCGAATCTTTCAACTTGGTTTCTTTA
AACGACAAATCGCCGTTGGTGAGCAACTCTTCTCTTACATTGAACGTGGA
AATTCATCTTCCAAGAAAACATCCCTTCTCTTCATCCACGGTTATTCAAA
CTCCAAAGAAATCTTTCTTGACGTCATCGCTTGGTTGCCACGTGACCTTC
ATGTCATTTCAGTGGATTTGCCTGGTCATGGAGAAAGCATGTGGGACGAG
AAGGACCAAGTCAGCATCACCAATTACGTTGACAAAATTCACCAGGTAAG
AAAAACATTATTAAATTATTTTTTAACAGATGAAAAGTTTTAAAACCATT
TAATGAGCTGGAAAATACCTAATGTTTTGTTTTATGTACTGTCGAACTGT
GTAAATGAGCTGTTCATCTTTTTTCTTCAGTTTGTGCAAGCAGTTGGATT
AAACAAAAAAAAGTTTCACATCGTTGGTGAATCCATGGGCGGGCATATTG
CGGGCGTTTATTCTGCCACACACCCTTCGTCAATCGAAAAGACCACCCTG
ATGTGTCCACATGGTATCAAGTTTGATCAAATGGAAAAAATGAAAGCTGA
ATACGAACGCACTGGGCATTGTATCTTATTACCGGATAGTCTGCAAACTG
TCCGTGAAATGTTCGAATGTGTCCTTCACAAGAAATTTCCCTTCCCCGAT
TTCGTATTGAATGGTATTTTACAAATGAGATTGCAAAACGACGACTTCAA
CAAAAAACGTAAGTCAATTTCATTGAAAGTTCACTTTTGAAATGAGCTGA
TTTCTCTGACCTCAAAGTTTCGTATACCTTCTAAATTTCAAGTAAAATCG
ATAAGAACAGATAAGTATATCAAAATGGAGAAAAATATAATGTATTTTCC
TCTTGACATTTCAGTGTTGTTACGTTTGGTGTCGTCTGAAGACGAAGATC
TCTTGGAACGTTCATTACACAACATACGATCACCATGCACACTCCTTTGG
GGAAAACAGGATAAGGTAAGGAAAATACTCTTTGATATCTTTCCAACTTC
TTCTCGAAGAATTGTTGGTTCGTCACTATAGAGGATGTAAACTTTTATTT
GAGACATAGAAATCTTCAAACAACAAATGCCTTTTAGTACGTCTATTAGT
GAGATAAGATTGGTATCTGTTGAGATTGTGCTAACTACATTCTTCTTCTA
ATATAACGTTTCGTTTGTTTATTTTTTGTAGATCTTGGACGTATCTTGCG
CAGATAAGATCAAATCCAACCTCCCAAACCTCAAAAAGACGGTGATTTTT
GACGATGCGGGACATGTCTTGTCAATTGACTGTCCGCGAAAAGTGGCTAG
CAATTTAATGGAATGTTAAAAACCTAACGACCCTCTTATGAGGTGATGAA
AGTCAATACATTTTTAACAGACGGATGAGCGAGAGCTCTGACTGACACCT
ACTCACATGCACGAGAGTGGTAGCAACTATTGTAGATTTTAATCTTATGC
AGATGTTTAGAAATTTTTGTAAATGTAAATATGTATATATTCTTTGAGAG
AGATGATAGATTATATAATGAAATAATGAAACACACGCTTAAACGAAATC
TAATAAATTTCTCGACGATCTTCAAAAGATATAAAAAATATGTCAAAGGC
GA Coding sequence (CDS) from alignment at sc0000100_pilon:317973..322774- >MSTRG.12919.2.p1 ID=MSTRG.12919.2.p1|Name=MSTRG.12919.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5175bp|location=Sequence derived from alignment at sc0000100_pilon:317973..322774- (Clytia hemisphaerica_ch_hm2_pilon)
ATCTTGGACGTATCTTGCGCAGATAAGATCAAATCCAACCTCCCAAACCT
CAAAAAGACGGTGATTTTTGACGATGCGGGACATGTCTTGTCAATTGACT
GTCCGCGAAAAGTGGCTAGCAATTTAATGGAATGTTAATGTTGTTACGTT
TGGTGTCGTCTGAAGACGAAGATCTCTTGGAACGTTCATTACACAACATA
CGATCACCATGCACACTCCTTTGGGGAAAACAGGATAAGTTTGTGCAAGC
AGTTGGATTAAACAAAAAAAAGTTTCACATCGTTGGTGAATCCATGGGCG
GGCATATTGCGGGCGTTTATTCTGCCACACACCCTTCGTCAATCGAAAAG
ACCACCCTGATGTGTCCACATGGTATCAAGTTTGATCAAATGGAAAAAAT
GAAAGCTGAATACGAACGCACTGGGCATTGTATCTTATTACCGGATAGTC
TGCAAACTGTCCGTGAAATGTTCGAATGTGTCCTTCACAAGAAATTTCCC
TTCCCCGATTTCGTATTGAATGGTATTTTACAAATGAGATTGCAAAACGA
CGACTTCAACAAAAAACATGTCGAATCTTTCAACTTGGTTTCTTTAAACG
ACAAATCGCCGTTGGTGAGCAACTCTTCTCTTACATTGAACGTGGAAATT
CATCTTCCAAGAAAACATCCCTTCTCTTCATCCACGGTTATTCAAACTCC
AAAGAAATCTTTCTTGACGTCATCGCTTGGTTGCCACGTGACCTTCATGT
CATTTCAGTGGATTTGCCTGGTCATGGAGAAAGCATGTGGGACGAGAAGG
ACCAAGTCAGCATCACCAATTACGTTGACAAAATTCACCAGATGGAGAGA
TTGTTGGAACTCATTACGAAGAAAAGCATCGACGAGGATCTAACCACGAT
CTTAACAAACATGTATAGCATCTCATCTATCGATTTCATCGAAGTTGGCA
AATGGTTTTTGTTCTTGAACATACCAGCCATTGTTTTCTTATTCATCGTG
AAGAATCCAGTGGTCTTCTTAAAACTCTTTCTAAGATCTTGGACGTATCT
TGCGCAGATAAGATCAAATCCAACCTCCCAAACCTCAAAAAGACGGTGAT
TTTTGACGATGCGGGACATGTCTTGTCAATTGACTGTCCGCGAAAAGTGG
CTAGCAATTTAATGGAATGTTAATGTTGTTACGTTTGGTGTCGTCTGAAG
ACGAAGATCTCTTGGAACGTTCATTACACAACATACGATCACCATGCACA
CTCCTTTGGGGAAAACAGGATAAGTTTGTGCAAGCAGTTGGATTAAACAA
AAAAAAGTTTCACATCGTTGGTGAATCCATGGGCGGGCATATTGCGGGCG
TTTATTCTGCCACACACCCTTCGTCAATCGAAAAGACCACCCTGATGTGT
CCACATGGTATCAAGTTTGATCAAATGGAAAAAATGAAAGCTGAATACGA
ACGCACTGGGCATTGTATCTTATTACCGGATAGTCTGCAAACTGTCCGTG
AAATGTTCGAATGTGTCCTTCACAAGAAATTTCCCTTCCCCGATTTCGTA
TTGAATGGTATTTTACAAATGAGATTGCAAAACGACGACTTCAACAAAAA
ACATGTCGAATCTTTCAACTTGGTTTCTTTAAACGACAAATCGCCGTTGG
TGAGCAACTCTTCTCTTACATTGAACGTGGAAATTCATCTTCCAAGAAAA
CATCCCTTCTCTTCATCCACGGTTATTCAAACTCCAAAGAAATCTTTCTT
GACGTCATCGCTTGGTTGCCACGTGACCTTCATGTCATTTCAGTGGATTT
GCCTGGTCATGGAGAAAGCATGTGGGACGAGAAGGACCAAGTCAGCATCA
CCAATTACGTTGACAAAATTCACCAGATGGAGAGATTGTTGGAACTCATT
ACGAAGAAAAGCATCGACGAGGATCTAACCACGATCTTAACAAACATGTA
TAGCATCTCATCTATCGATTTCATCGAAGTTGGCAAATGGTTTTTGTTCT
TGAACATACCAGCCATTGTTTTCTTATTCATCGTGAAGAATCCAGTGGTC
TTCTTAAAACTCTTTCTAAGATCTTGGACGTATCTTGCGCAGATAAGATC
AAATCCAACCTCCCAAACCTCAAAAAGACGGTGATTTTTGACGATGCGGG
ACATGTCTTGTCAATTGACTGTCCGCGAAAAGTGGCTAGCAATTTAATGG
AATGTTAATGTTGTTACGTTTGGTGTCGTCTGAAGACGAAGATCTCTTGG
AACGTTCATTACACAACATACGATCACCATGCACACTCCTTTGGGGAAAA
CAGGATAAGTTTGTGCAAGCAGTTGGATTAAACAAAAAAAAGTTTCACAT
CGTTGGTGAATCCATGGGCGGGCATATTGCGGGCGTTTATTCTGCCACAC
ACCCTTCGTCAATCGAAAAGACCACCCTGATGTGTCCACATGGTATCAAG
TTTGATCAAATGGAAAAAATGAAAGCTGAATACGAACGCACTGGGCATTG
TATCTTATTACCGGATAGTCTGCAAACTGTCCGTGAAATGTTCGAATGTG
TCCTTCACAAGAAATTTCCCTTCCCCGATTTCGTATTGAATGGTATTTTA
CAAATGAGATTGCAAAACGACGACTTCAACAAAAAACATGTCGAATCTTT
CAACTTGGTTTCTTTAAACGACAAATCGCCGTTGGTGAGCAACTCTTCTC
TTACATTGAACGTGGAAATTCATCTTCCAAGAAAACATCCCTTCTCTTCA
TCCACGGTTATTCAAACTCCAAAGAAATCTTTCTTGACGTCATCGCTTGG
TTGCCACGTGACCTTCATGTCATTTCAGTGGATTTGCCTGGTCATGGAGA
AAGCATGTGGGACGAGAAGGACCAAGTCAGCATCACCAATTACGTTGACA
AAATTCACCAGATGGAGAGATTGTTGGAACTCATTACGAAGAAAAGCATC
GACGAGGATCTAACCACGATCTTAACAAACATGTATAGCATCTCATCTAT
CGATTTCATCGAAGTTGGCAAATGGTTTTTGTTCTTGAACATACCAGCCA
TTGTTTTCTTATTCATCGTGAAGAATCCAGTGGTCTTCTTAAAACTCTTT
CTAAGATCTTGGACGTATCTTGCGCAGATAAGATCAAATCCAACCTCCCA
AACCTCAAAAAGACGGTGATTTTTGACGATGCGGGACATGTCTTGTCAAT
TGACTGTCCGCGAAAAGTGGCTAGCAATTTAATGGAATGTTAATGTTGTT
ACGTTTGGTGTCGTCTGAAGACGAAGATCTCTTGGAACGTTCATTACACA
ACATACGATCACCATGCACACTCCTTTGGGGAAAACAGGATAAGTTTGTG
CAAGCAGTTGGATTAAACAAAAAAAAGTTTCACATCGTTGGTGAATCCAT
GGGCGGGCATATTGCGGGCGTTTATTCTGCCACACACCCTTCGTCAATCG
AAAAGACCACCCTGATGTGTCCACATGGTATCAAGTTTGATCAAATGGAA
AAAATGAAAGCTGAATACGAACGCACTGGGCATTGTATCTTATTACCGGA
TAGTCTGCAAACTGTCCGTGAAATGTTCGAATGTGTCCTTCACAAGAAAT
TTCCCTTCCCCGATTTCGTATTGAATGGTATTTTACAAATGAGATTGCAA
AACGACGACTTCAACAAAAAACATGTCGAATCTTTCAACTTGGTTTCTTT
AAACGACAAATCGCCGTTGGTGAGCAACTCTTCTCTTACATTGAACGTGG
AAATTCATCTTCCAAGAAAACATCCCTTCTCTTCATCCACGGTTATTCAA
ACTCCAAAGAAATCTTTCTTGACGTCATCGCTTGGTTGCCACGTGACCTT
CATGTCATTTCAGTGGATTTGCCTGGTCATGGAGAAAGCATGTGGGACGA
GAAGGACCAAGTCAGCATCACCAATTACGTTGACAAAATTCACCAGATGG
AGAGATTGTTGGAACTCATTACGAAGAAAAGCATCGACGAGGATCTAACC
ACGATCTTAACAAACATGTATAGCATCTCATCTATCGATTTCATCGAAGT
TGGCAAATGGTTTTTGTTCTTGAACATACCAGCCATTGTTTTCTTATTCA
TCGTGAAGAATCCAGTGGTCTTCTTAAAACTCTTTCTAAGATCTTGGACG
TATCTTGCGCAGATAAGATCAAATCCAACCTCCCAAACCTCAAAAAGACG
GTGATTTTTGACGATGCGGGACATGTCTTGTCAATTGACTGTCCGCGAAA
AGTGGCTAGCAATTTAATGGAATGTTAATGTTGTTACGTTTGGTGTCGTC
TGAAGACGAAGATCTCTTGGAACGTTCATTACACAACATACGATCACCAT
GCACACTCCTTTGGGGAAAACAGGATAAGTTTGTGCAAGCAGTTGGATTA
AACAAAAAAAAGTTTCACATCGTTGGTGAATCCATGGGCGGGCATATTGC
GGGCGTTTATTCTGCCACACACCCTTCGTCAATCGAAAAGACCACCCTGA
TGTGTCCACATGGTATCAAGTTTGATCAAATGGAAAAAATGAAAGCTGAA
TACGAACGCACTGGGCATTGTATCTTATTACCGGATAGTCTGCAAACTGT
CCGTGAAATGTTCGAATGTGTCCTTCACAAGAAATTTCCCTTCCCCGATT
TCGTATTGAATGGTATTTTACAAATGAGATTGCAAAACGACGACTTCAAC
AAAAAACATGTCGAATCTTTCAACTTGGTTTCTTTAAACGACAAATCGCC
GTTGGTGAGCAACTCTTCTCTTACATTGAACGTGGAAATTCATCTTCCAA
GAAAACATCCCTTCTCTTCATCCACGGTTATTCAAACTCCAAAGAAATCT
TTCTTGACGTCATCGCTTGGTTGCCACGTGACCTTCATGTCATTTCAGTG
GATTTGCCTGGTCATGGAGAAAGCATGTGGGACGAGAAGGACCAAGTCAG
CATCACCAATTACGTTGACAAAATTCACCAGATGGAGAGATTGTTGGAAC
TCATTACGAAGAAAAGCATCGACGAGGATCTAACCACGATCTTAACAAAC
ATGTATAGCATCTCATCTATCGATTTCATCGAAGTTGGCAAATGGTTTTT
GTTCTTGAACATACCAGCCATTGTTTTCTTATTCATCGTGAAGAATCCAG
TGGTCTTCTTAAAACTCTTTCTAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000100_pilon | genome | sc0000100_pilon:317973..322774 - |
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