MSTRG.12914.1.p1 (mRNA) -

Overview
NameMSTRG.12914.1.p1
Unique NameMSTRG.12914.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000100_pilon:265139..266019+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.12914.1.p1 ID=MSTRG.12914.1.p1|Name=MSTRG.12914.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=881bp|location=Sequence derived from alignment at sc0000100_pilon:265139..266019+ (Clytia hemisphaerica_ch_hm2_pilon)
GTCAAGACGCcggttttaaagatttaaagaaGAAACACAAAATACAAGGA
GATTCCATTGACACAATGGCAAACGAGAATCTCGGAGTTCCGTACTATTA
TCACTTTCGAAAGGACTTAAACAGGCCATATGGATTGGCTTGGGACCGTG
ACTTTTATGAACGCGAGCAAATGAAGAAAGTATTAAAGACTGTCAACTGC
GAATTCTTTAACAGGCCGTTACATGGCATGTCCGAGTTTGCATCCACCGC
CGAACAAAACTTCGATTTCATGTCTAGCAGTGATGCTCACGAATTCATTC
CGATGTACTTGGAAAAAGTATCCGCGATTGTCAAGCATTGCGTAGTGTTA
AACAGACAGAACAAGAGTGGCGGTaagtaaattttatttcataatggCCC
TGCACAGAAAGTGCTAATAATTTCCTTTTCTTACGCGAAATGTACCCGTG
TCCATTCTATGTTGTTCAAATTGGAACgtctttatttaatttttttatat
cttcCATGTAGGTGACGAACAAGCAAGTCTAGCCGCATTAGaagaatttt
tcaataaaaaggaTGAGCTTTTCGAATCACTCTTAAAAGAGCTGGGAAAG
TTTTCGTCTTCATTGATGCTAATAAATCATTGGATCAGAGTTCTCCAATA
CGTGTCTGCGGAACCGGCGGACGTTTTGCACAAACTCCATAAAGACGCAG
AAATGCCCAATTTCAGAAGAGATCCAACTTGGAAATCTTACATTGAAGAC
ACGTCAAAACATTATCTTGGATCGCAAGCCAGGGTTGTCACCGACACTCC
AAACAAGCCGGTTAAAAAATCGTTGAGACAACTTGCCGATGAAGAAAGAA
AAGCGAAAGCAGCCCaaaaaaaTGTGATTGT

Coding sequence (CDS) from alignment at sc0000100_pilon:265139..266019+

>MSTRG.12914.1.p1 ID=MSTRG.12914.1.p1|Name=MSTRG.12914.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1350bp|location=Sequence derived from alignment at sc0000100_pilon:265139..266019+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAAACGAGAATCTCGGAGTTCCGTACTATTATCACTTTCGAAAGGA
CTTAAACAGGCCATATGGATTGGCTTGGGACCGTGACTTTTATGAACGCG
AGCAAATGAAGAAAGTATTAAAGACTGTCAACTGCGAATTCTTTAACAGG
CCGTTACATGGCATGTCCGAGTTTGCATCCACCGCCGAACAAAACTTCGA
TTTCATGTCTAGCAGTGATGCTCACGAATTCATTCCGATGTACTTGGAAA
AAGTATCCGCGATTGTCAAGCATTGCGTAGTGTTAAACAGACAGAACAAG
AGTGGCGGTGACGAACAAGCAAGTCTAGCCGCATTAGaagaatttttcaa
taaaaaggaTGAGCTTTTCGAATCACTCTTAAAAGAGCTGGGAAAGTTTT
CGTCTTCATTGATGCTAATAAATCATTGGATCAGAGTTCTCCAATACGTG
TCTGCGGAACCGGCGGACGTTTTGCACAAACTCCATAAAGACGCAGAAAT
GCCCAATTTCAGAAGAGATCCAACTTGGAAATCTTACATTGAAGACACGT
CAAAACATTATCTTGGATCGCAAGCCAGGGTTGTCACCGACACTCCAAAC
AAGCCGGTTAAAAAATCGTTGAGACAACTTGCCGATGAAGAAAGAAAAGC
GAAAGCAGCCCaaaaaaaTGTGATTATGGCAAACGAGAATCTCGGAGTTC
CGTACTATTATCACTTTCGAAAGGACTTAAACAGGCCATATGGATTGGCT
TGGGACCGTGACTTTTATGAACGCGAGCAAATGAAGAAAGTATTAAAGAC
TGTCAACTGCGAATTCTTTAACAGGCCGTTACATGGCATGTCCGAGTTTG
CATCCACCGCCGAACAAAACTTCGATTTCATGTCTAGCAGTGATGCTCAC
GAATTCATTCCGATGTACTTGGAAAAAGTATCCGCGATTGTCAAGCATTG
CGTAGTGTTAAACAGACAGAACAAGAGTGGCGGTGACGAACAAGCAAGTC
TAGCCGCATTAGaagaatttttcaataaaaaggaTGAGCTTTTCGAATCA
CTCTTAAAAGAGCTGGGAAAGTTTTCGTCTTCATTGATGCTAATAAATCA
TTGGATCAGAGTTCTCCAATACGTGTCTGCGGAACCGGCGGACGTTTTGC
ACAAACTCCATAAAGACGCAGAAATGCCCAATTTCAGAAGAGATCCAACT
TGGAAATCTTACATTGAAGACACGTCAAAACATTATCTTGGATCGCAAGC
CAGGGTTGTCACCGACACTCCAAACAAGCCGGTTAAAAAATCGTTGAGAC
AACTTGCCGATGAAGAAAGAAAAGCGAAAGCAGCCCaaaaaaaTGTGATT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.12914MSTRG.12914Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12914.1.p1.exon1MSTRG.12914.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.12914.1.p1.exon2MSTRG.12914.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12914.1.p1MSTRG.12914.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000100_pilongenomesc0000100_pilon:265139..266019 +