MSTRG.12910.10.p1 (mRNA) -

Overview
NameMSTRG.12910.10.p1
Unique NameMSTRG.12910.10.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000100_pilon:210098..211299+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.12910.10.p1 ID=MSTRG.12910.10.p1|Name=MSTRG.12910.10.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1202bp|location=Sequence derived from alignment at sc0000100_pilon:210098..211299+ (Clytia hemisphaerica_ch_hm2_pilon)
AGGAGAAAGTTAACGATCTTGTTTTGGTGTATTTCTTACATAACGCCACC ATATAAAATGTGGAAGATCTGAACAACCGAACATCATTCACAATCATTCA ATTGGTGAAGAAAAATCACAacattcattcaaaatgatgaaattcaCAGT TCTTGCAACTTTGTTGGCCGGTAAGTCCAATTATGTTATACTTTGAAAGC TCTTTGAAAGTCTTCACAATTGAGCCTGGTCTTTGCAATTTGTCTCTTTG ATTTTACAAATCAGAAGTATCCTAGATGTTCACTTTCAAATTATTCCTGA ATGTGAACAATTAGTTTTATTCGGTTCACGTATTGAAAGATACGAAATAA AGCAGACTATCGAGTAGGTAGGGGGTTCTTTAAAAGAAGATAGTGTCAGC CagctcatttttttcattcttttttagtCTCAATGGCATTGGAAGTTCCA CAAGCAGCAGAAGGACCACATATTGCCAAAGATGTTGATTGTCCATCATA TTTGTGTAATGGAAAACCCGATGGAAATTTCGAATACAGACCATATTCTG GATATGTCAAAAACCAATTCGTTCAATGTGTTGATGGAAAACCTTCATGT CAAGTTTGCTGGCCAaagaatcttgaattctctGAAAGATGCAACCAATG TCTTTACAGTGCTCATGGTAAGGAAAAtgcttttattttaaaatagcgat ctgaaaaactttaaaaaacctGAAGACCTATATGATTTCAAACCCATGCG AACTTACAAGTATTCTGAACCTTATTCTAATTAACTTATATTCCTTCCTT TCTTTCAGATGAATGTGTGTCGACTGTTACATTCAGCCCTGCTGTCACCT CATTCTGTCCTGACAAATGCCCACACCGTGGACCAAAATTCAGTGGAAAC ATTGCTGACTCAGACAACAACAAACATTACATTGCATGCTGGGAAGGTGT GACTGTTGGTTGTGTTGATTGTCCAAAAGGATTGTTGTTCAACGAACAAT GGAATGCATGTTTATACAACGGAGTTCATATCACCAAACCTGGATCCCAC TAAGTTCGCAACGtgaatgaatattttaattttgaggaaaaacgaaattt caactttttaaatttaaatatttaatgttcatattttgtaattttttaat gtttttaaatgaaactCTTCCAAAGAGATGACTAAATGTGActctttcaa aa

Coding sequence (CDS) from alignment at sc0000100_pilon:210098..211299+

>MSTRG.12910.10.p1 ID=MSTRG.12910.10.p1|Name=MSTRG.12910.10.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1566bp|location=Sequence derived from alignment at sc0000100_pilon:210098..211299+ (Clytia hemisphaerica_ch_hm2_pilon)
atgatgaaattcaCAGTTCTTGCAACTTTGTTGGCCGtCTCAATGGCATT
GGAAGTTCCACAAGCAGCAGAAGGACCACATATTGCCAAAGATGTTGATT
GTCCATCATATTTGTGTAATGGAAAACCCGATGGAAATTTCGAATACAGA
CCATATTCTGGATATGTCAAAAACCAATTCGTTCAATGTGTTGATGGAAA
ACCTTCATGTCAAGTTTGCTGGCCAaagaatcttgaattctctGAAAGAT
GCAACCAATGTCTTTACAGTGCTCATGATGAATGTGTGTCGACTGTTACA
TTCAGCCCTGCTGTCACCTCATTCTGTCCTGACAAATGCCCACACCGTGG
ACCAAAATTCAGTGGAAACATTGCTGACTCAGACAACAACAAACATTACA
TTGCATGCTGGGAAGGTGTGACTGTTGGTTGTGTTGATTGTCCAAAAGGA
TTGTTGTTCAACGAACAATGGAATGCATGTTTATACAACGGAGTTCATAT
CACCAAACCTGGATCCCACTAAatgatgaaattcaCAGTTCTTGCAACTT
TGTTGGCCGtCTCAATGGCATTGGAAGTTCCACAAGCAGCAGAAGGACCA
CATATTGCCAAAGATGTTGATTGTCCATCATATTTGTGTAATGGAAAACC
CGATGGAAATTTCGAATACAGACCATATTCTGGATATGTCAAAAACCAAT
TCGTTCAATGTGTTGATGGAAAACCTTCATGTCAAGTTTGCTGGCCAaag
aatcttgaattctctGAAAGATGCAACCAATGTCTTTACAGTGCTCATGA
TGAATGTGTGTCGACTGTTACATTCAGCCCTGCTGTCACCTCATTCTGTC
CTGACAAATGCCCACACCGTGGACCAAAATTCAGTGGAAACATTGCTGAC
TCAGACAACAACAAACATTACATTGCATGCTGGGAAGGTGTGACTGTTGG
TTGTGTTGATTGTCCAAAAGGATTGTTGTTCAACGAACAATGGAATGCAT
GTTTATACAACGGAGTTCATATCACCAAACCTGGATCCCACTAAatgatg
aaattcaCAGTTCTTGCAACTTTGTTGGCCGtCTCAATGGCATTGGAAGT
TCCACAAGCAGCAGAAGGACCACATATTGCCAAAGATGTTGATTGTCCAT
CATATTTGTGTAATGGAAAACCCGATGGAAATTTCGAATACAGACCATAT
TCTGGATATGTCAAAAACCAATTCGTTCAATGTGTTGATGGAAAACCTTC
ATGTCAAGTTTGCTGGCCAaagaatcttgaattctctGAAAGATGCAACC
AATGTCTTTACAGTGCTCATGATGAATGTGTGTCGACTGTTACATTCAGC
CCTGCTGTCACCTCATTCTGTCCTGACAAATGCCCACACCGTGGACCAAA
ATTCAGTGGAAACATTGCTGACTCAGACAACAACAAACATTACATTGCAT
GCTGGGAAGGTGTGACTGTTGGTTGTGTTGATTGTCCAAAAGGATTGTTG
TTCAACGAACAATGGAATGCATGTTTATACAACGGAGTTCATATCACCAA
ACCTGGATCCCACTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.12910MSTRG.12910Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12910.10.p1MSTRG.12910.10.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12910.10.p1.exon1MSTRG.12910.10.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.12910.10.p1.exon2MSTRG.12910.10.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.12910.10.p1.exon3MSTRG.12910.10.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000100_pilongenomesc0000100_pilon:210098..211299 +