MSTRG.12907.2.p1 (mRNA) -

Overview
NameMSTRG.12907.2.p1
Unique NameMSTRG.12907.2.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000100_pilon:184224..185278-

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.12907.2.p1 ID=MSTRG.12907.2.p1|Name=MSTRG.12907.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1055bp|location=Sequence derived from alignment at sc0000100_pilon:184224..185278- (Clytia hemisphaerica_ch_hm2_pilon)
AAAAGAGAGACGTTGGAAGCTTTAGACCATCAACAATCAGCTTCACCAAG CACCAACAAAGAACATTTGCGTTCACCACAAATAACTCAACAAAGATGAT GAAACTCGTTTGCATCGCTGCTTTATTAGCAGGTATAACTTATATTTTAT ATAAGGCAACTGTTATTCTGCATTAGCTCATATATTATATGTCTCGTGCA TCTTTTCTATGAAAACTAGTAGGTTTCTGGTTTCGTACTACCCTTCTCTA GTTTATTATTGACGATGTGTTTTCCTTTCTGGATTTAACGTAATTTCATT AATTTATTCACACAGTTTCGATGGCTTTGGAAGTCCCACAAGCAGCAGAA GGACCACATATTGCCAAAGATGTTGATTGTCCATCATATTTGTGTAATGG AAAACCCGATGGAAATTTCGAATACAGACCATATTCTGGATATGTCAAAA ACCAATTCGTTCAATGTGCTGATGGAAAACCTTCATGTCAAGTTTGCTGG CCAAAGAATCTTGAATTCTCTGAAAGATGCAACCAATGTCTTTACAGTGC TCATGGTAAGGAAAATACTTTTATTTTGAAGTTGTGATCTGAAAGACTTG AAAAACTGAAGACCTCTATGATTTCCAACCCATGTGAACTTACAAGTATT CTGAACCTTGTCCTAATTGACTTATATTCCTTCTTTTCTTTCAGATGAAT GTGTGTCGACTGTTGCATTCAGCCCTGCTGTCACCTCATTCTGTCCTGAC AAATGCCCACACCGTGGACCAAAATTCAGTGGAAACATTGCTGACTCAGA CAACAACAAACATTACATTGCATGCTGGGAAGGTGTGACTGTTGGTTGTG TTGATTGTCCAAAAGGATTGTTGTTCAACGAACAATGGAATGCATGTTTA TACAACGGAGTACACATCACCAAACCTGGATCCCACTAAATTAAAATCCA TTCATCCGGATGTCAAATCATTTCAAATTTTCTGACCTTTTTTAATTATT GTAAATTTTTATTTTTCTATTTTCATAAAAAAGACACTGAATTTCCATTA AATTT

Coding sequence (CDS) from alignment at sc0000100_pilon:184224..185278-

>MSTRG.12907.2.p1 ID=MSTRG.12907.2.p1|Name=MSTRG.12907.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1845bp|location=Sequence derived from alignment at sc0000100_pilon:184224..185278- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATGTGTGTCGACTGTTGCATTCAGCCCTGCTGTCACCTCATTCTGT
CCTGACAAATGCCCACACCGTGGACCAAAATTCAGTGGAAACATTGCTGA
CTCAGACAACAACAAACATTACATTGCATGCTGGGAAGGTGTGACTGTTG
GTTGTGTTGATTGTCCAAAAGGATTGTTGTTCAACGAACAATGGAATGCA
TGTTTATACAACGGAGTACACATCACCAAACCTGGATCCCACTAATTTCG
ATGGCTTTGGAAGTCCCACAAGCAGCAGAAGGACCACATATTGCCAAAGA
TGTTGATTGTCCATCATATTTGTGTAATGGAAAACCCGATGGAAATTTCG
AATACAGACCATATTCTGGATATGTCAAAAACCAATTCGTTCAATGTGCT
GATGGAAAACCTTCATGTCAAGTTTGCTGGCCAAAGAATCTTGAATTCTC
TGAAAGATGCAACCAATGTCTTTACAGTGCTCATGAAGAGAGACGTTGGA
AGCTTTAGACCATCAACAATCAGCTTCACCAAGCACCAACAAAGAACATT
TGCGTTCACCACAAATAACTCAACAAAGATGATGAAACTCGTTTGCATCG
CTGCTTTATTAGCAGATGAATGTGTGTCGACTGTTGCATTCAGCCCTGCT
GTCACCTCATTCTGTCCTGACAAATGCCCACACCGTGGACCAAAATTCAG
TGGAAACATTGCTGACTCAGACAACAACAAACATTACATTGCATGCTGGG
AAGGTGTGACTGTTGGTTGTGTTGATTGTCCAAAAGGATTGTTGTTCAAC
GAACAATGGAATGCATGTTTATACAACGGAGTACACATCACCAAACCTGG
ATCCCACTAATTTCGATGGCTTTGGAAGTCCCACAAGCAGCAGAAGGACC
ACATATTGCCAAAGATGTTGATTGTCCATCATATTTGTGTAATGGAAAAC
CCGATGGAAATTTCGAATACAGACCATATTCTGGATATGTCAAAAACCAA
TTCGTTCAATGTGCTGATGGAAAACCTTCATGTCAAGTTTGCTGGCCAAA
GAATCTTGAATTCTCTGAAAGATGCAACCAATGTCTTTACAGTGCTCATG
AAGAGAGACGTTGGAAGCTTTAGACCATCAACAATCAGCTTCACCAAGCA
CCAACAAAGAACATTTGCGTTCACCACAAATAACTCAACAAAGATGATGA
AACTCGTTTGCATCGCTGCTTTATTAGCAGATGAATGTGTGTCGACTGTT
GCATTCAGCCCTGCTGTCACCTCATTCTGTCCTGACAAATGCCCACACCG
TGGACCAAAATTCAGTGGAAACATTGCTGACTCAGACAACAACAAACATT
ACATTGCATGCTGGGAAGGTGTGACTGTTGGTTGTGTTGATTGTCCAAAA
GGATTGTTGTTCAACGAACAATGGAATGCATGTTTATACAACGGAGTACA
CATCACCAAACCTGGATCCCACTAATTTCGATGGCTTTGGAAGTCCCACA
AGCAGCAGAAGGACCACATATTGCCAAAGATGTTGATTGTCCATCATATT
TGTGTAATGGAAAACCCGATGGAAATTTCGAATACAGACCATATTCTGGA
TATGTCAAAAACCAATTCGTTCAATGTGCTGATGGAAAACCTTCATGTCA
AGTTTGCTGGCCAAAGAATCTTGAATTCTCTGAAAGATGCAACCAATGTC
TTTACAGTGCTCATGAAGAGAGACGTTGGAAGCTTTAGACCATCAACAAT
CAGCTTCACCAAGCACCAACAAAGAACATTTGCGTTCACCACAAATAACT
CAACAAAGATGATGAAACTCGTTTGCATCGCTGCTTTATTAGCAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.12907MSTRG.12907Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12907.2.p1.exon3MSTRG.12907.2.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.12907.2.p1.exon2MSTRG.12907.2.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.12907.2.p1.exon1MSTRG.12907.2.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12907.2.p1MSTRG.12907.2.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000100_pilongenomesc0000100_pilon:184224..185278 -