|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000100_pilon:13735..17633+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12898.2.p1 ID=MSTRG.12898.2.p1|Name=MSTRG.12898.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3899bp|location=Sequence derived from alignment at sc0000100_pilon:13735..17633+ (Clytia hemisphaerica_ch_hm2_pilon)
AggtcaaaatagaaaaagaataaaatcaaatcaaaactttgGTCTGGTGT
TCAAGTGAAAAGTTTGCATAGTGAGGAGGTCCAAACAACTAACGTATAGA
TAAAGATAGGCATCTAAAGGAACGATGCTGAACTCCCTCAGAGATTGTCT
TGGTTTGAATAAACGAACTTCTTTATTACTACTGGGAATCAATTCAGCTG
GCAAAACATCAATTTTGTATCGTTTATTGCTTGGAGAATTGATGAAAGTT
ATACCAACAGTAGGTAAATAGTTTTCCTTTATTTTGCCTTCTTCTTTGTC
GTACACGAAGGTAGAATAAAAATGGTtcttgatacctctctgcttgatgc
tcagtactaaagagaaagatcaagggtaagtggagcaatccagggaaagg
aatggcgcccttccctaccttcaggtagacaACTAGAGAAAAGGGTCAcc
ctcgactgcggtcacaCACTTACCaatgtaggatttgaagccactcATTC
CCTACATGGGTCTGCGTGATTTTCATACAAATGCTGGATTGGAATAAGTA
AGGTTTGGATTGGaaaaagtaagatttactgccaaatttgaaaatgtaaa
acgcaaaaacaaagaaaaagtttcatttcGTCATCCGAAGAGTGGCGTAT
ATctaaaggcttcactttttcttgcttgcgaaaggttgaagattcaccTC
TGGCGATCGGCTTTAAACTCAATCATTcttattttaatcaaaaatatatt
tcaaaaccaaaaaatttaaaaatccataactcggagtttcatgctctaag
caatcatcagatgtaactaaaaaattaaaaagctgtgtaaaaacatatgt
tacaaaattggtaaattggtaaatCTTATTTTATGAAGGTTTCCAATCAG
AAGACATATTACACAATGGAAATTATTTCAGAATTCTTGACATCGGAGGG
GGCTGCAAAATACCTCCATTATGGCGTCATTATTTCGAACATTATCAAGG
TATATAATATTTATTTGTTGTATAAAATGTCAGAAAGAATTGTTTTAGTG
AAAATTATAGGGCTTTGTATAAAATGTTACATTTGACCCCTTTTGATTAA
TCGTATAGTTTGAAAAGATTGTTAGTGGTTTCCTAGCACCCACAACCTAT
AAATATCGTCTGAGTTTCAGAAAGccatttcttcaatttcttctagAGCC
TCTAATTATCAACGTGATatagtcttcataactcgaacccgcatgaggaa
cacaaatttgttcgagttacgaaggcattgttaacttaagggctctgacc
atagtgaatttttcataattgccgtgtttaaaatgtgttttctgactgat
ttaaccaacaaaactatggcatgttatacattttctgttaggcaaactat
tcctgaatctgaaaattcaaaaattgcattgaaaaaatttgatgaaaaag
aaaatgaagacttttgcgagaaagagtatttcaactttgaagagcttagt
ttcggcgaagaaaaaactttttgaaacatttttcgcagtagatggtgtat
cttttaccgaacaataaaaatttttgcggaaaatttttcttaatgcttct
ttgtctctaAATCTTCAAagtagtggtttttcatcaatttttcatctgga
ttttgcttgaaaaaacagtcataacttttgacacatctttttagaaagat
tttccgcaaaatttaaaatagttcaattcgttgcggacagtttgaaaaaa
gttggaaacaaaaaggttaattacccattaaaacttagcactttttataa
aagaaggcgatgcaacatattattaacgtctttttaaagttcataacgtc
atttttgcaattaagttcttaattactcttaaggggtttgattaaaaagc
aatttataaaggcaattcttagGTAAAAGTGTTAAAGGATCTAAAACATa
gcttttatgttcagatacgaaaatcaattttctgactatggtcagagccc
ttaaggagAGATCCGAGTTCAAGTCTACTGTAGTTCTATGTAAGAGAACA
ATCATATACTTTatcatgcatgatttgacagtataaggcacaaaatcgtg
aaaatattgtcactCAATAGTACcgtccgcgaaattaagtccccgcggaT
ATCTCAAAATTTCACGGATGAGCTCAAACGCAAAacttaatccccgcgaa
aattaattccattAAAGTAGCTaaaatcatttatagacaaaagattaaat
tgaaaaatatttttgaaatcattttcctaaaaaattatagcgctctgaat
tatcttttcaacggtaaaTTGATAGCTAATTTCAGACTTTACTTACTATT
CAAAACTACTATTGAAAACTTTCTTGGATTTAAAACACCTATCAACAATC
TAAACGCTTAAGGTAGAAAAGTTCATTAAGTCtttttttCACTATCTTTA
GGTATTATCTACGTGGTAGATTCGACAAGCCGTGATTACATTGAAGAAAC
AAAATCCACTTTATATCATTGCATATTAATTAAAGACGAAGCTCAACATT
ATCCAATTATAGTTTTTGCCAATAAACAGGTGCGATGTCAAAATTTGTAC
AAGGCTTACTCTTAAAATCGGGTTAAATCGAGGGTCTGTAGAAAGACttt
ttttCTGAATGCTGATTCACAggtttccaaattttttaaattatacagtg
tcccaaaaaagcggataaataaaatcctcaaaactcattacactctcggg
tacctaataagcgtccccGCTAATTTTCATTCTTATCCCCCGCTTATTAT
TTTTTGGGaaactgtttttaaaacttcccccttttgccctaattctccTG
TATTAGCatcattttccacccaggacatttttattccaccccctcCCCGC
TTATCAAGTTTTGAGGTTTTTTCTCCTCCtactgcttattccaacccaaC
TACCCGgctaaacatgtttttttataagcattgcacttataagcatgtct
aggctcagatatgggaaaaaattaagcatatactAAGCATTACCTCGAGC
CTATGaaaaaaaGTATAAGCTATTTTGTAGTATGGATATAAGCAGTATTA
TCTCTGatcctgttttcggatttttatatgcttataaaaaaacacgtaag
GTACCCGATTGGATTTAGAATAATTGAAGTAAGATTAAACTTCCCgctca
atcaatagatattagATTCCCAAGATAATTGAATATCTCATTGAAACGGC
tttttttGGAACACACTGTAGAACTCAAAAGGATTAAGATAAATTGTTAT
CCTCTCTCTAAAAACGGAGATTAAAATAAGGAAATGAGATTGAATAATCT
TTATAATAGGACTTACCGAACGCAATGAGCACATTAGAAATCACCGAAAA
ATTAGAATTGAACGAAATCAAAGATCGAAGTTGGCATATCCAAGGAACTT
CTGCTTCGACAGGTGAAGGTCTTTATGAAGGTTTAGACTGGATCTatgat
gaaatacaaaataaaaaacaggaTTGAAAGATATGTTTATAGCACATGTC
TTTGGTTAGAATCATTGTGATGAGTTTAACACTGGAGAAGGagcgaaaac
aaaggaaattgacACGGTAGTAAATGTTTTGAAGAGTGTTTTGGCGCCAC
TGCCCGAGCAAGGAAACCTCTTAAACTTCAAGACAGGATGGTGAGTTCAT
CATTAAAAGATTTGTACATACCTATCAGAGGAAAGATACCATCAAATAAT
GTTTCCGTGTGGCTGCAATTTCTATCGGTGATGACCAACCCACCACGTAG
TTTTAGATTTCGCTCCGTGGATTACAACTAGCTTTATATTACAATCAAAT
TTGTTAACCTAGTTCTTGATTTTATTTTCTctggaaagaaaaataaaaa Coding sequence (CDS) from alignment at sc0000100_pilon:13735..17633+ >MSTRG.12898.2.p1 ID=MSTRG.12898.2.p1|Name=MSTRG.12898.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1305bp|location=Sequence derived from alignment at sc0000100_pilon:13735..17633+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTGAACTCCCTCAGAGATTGTCTTGGTTTGAATAAACGAACTTCTTT
ATTACTACTGGGAATCAATTCAGCTGGCAAAACATCAATTTTGTATCGTT
TATTGCTTGGAGAATTGATGAAAGTTATACCAACAGTAGGTATTATCTAC
GTGGTAGATTCGACAAGCCGTGATTACATTGAAGAAACAAAATCCACTTT
ATATCATTGCATATTAATTAAAGACGAAGCTCAACATTATCCAATTATAG
TTTTTGCCAATAAACAGGACTTACCGAACGCAATGAGCACATTAGAAATC
ACCGAAAAATTAGAATTGAACGAAATCAAAGATCGAAGTTGGCATATCCA
AGGAACTTCTGCTTCGACAGGTGAAGGTCTTTATGAAGGTTTAGACTGGA
TCTatgatgaaatacaaaataaaaaacaggaTTGAATGCTGAACTCCCTC
AGAGATTGTCTTGGTTTGAATAAACGAACTTCTTTATTACTACTGGGAAT
CAATTCAGCTGGCAAAACATCAATTTTGTATCGTTTATTGCTTGGAGAAT
TGATGAAAGTTATACCAACAGTAGGTATTATCTACGTGGTAGATTCGACA
AGCCGTGATTACATTGAAGAAACAAAATCCACTTTATATCATTGCATATT
AATTAAAGACGAAGCTCAACATTATCCAATTATAGTTTTTGCCAATAAAC
AGGACTTACCGAACGCAATGAGCACATTAGAAATCACCGAAAAATTAGAA
TTGAACGAAATCAAAGATCGAAGTTGGCATATCCAAGGAACTTCTGCTTC
GACAGGTGAAGGTCTTTATGAAGGTTTAGACTGGATCTatgatgaaatac
aaaataaaaaacaggaTTGAATGCTGAACTCCCTCAGAGATTGTCTTGGT
TTGAATAAACGAACTTCTTTATTACTACTGGGAATCAATTCAGCTGGCAA
AACATCAATTTTGTATCGTTTATTGCTTGGAGAATTGATGAAAGTTATAC
CAACAGTAGGTATTATCTACGTGGTAGATTCGACAAGCCGTGATTACATT
GAAGAAACAAAATCCACTTTATATCATTGCATATTAATTAAAGACGAAGC
TCAACATTATCCAATTATAGTTTTTGCCAATAAACAGGACTTACCGAACG
CAATGAGCACATTAGAAATCACCGAAAAATTAGAATTGAACGAAATCAAA
GATCGAAGTTGGCATATCCAAGGAACTTCTGCTTCGACAGGTGAAGGTCT
TTATGAAGGTTTAGACTGGATCTatgatgaaatacaaaataaaaaacagg
aTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000100_pilon | genome | sc0000100_pilon:13735..17633 + |
|
