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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000100_pilon:9499..12184+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12896.1.p1 ID=MSTRG.12896.1.p1|Name=MSTRG.12896.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2686bp|location=Sequence derived from alignment at sc0000100_pilon:9499..12184+ (Clytia hemisphaerica_ch_hm2_pilon)
TATGGAATAGGGAAATCTCGTCAAGCTAATAACTGCTGAAAGGTACAAAA
AGTATTTCACTGATGTTTATCATAAGAAATTTCGCTGTTATATTTAAACG
CGAGAAAGAATAGCGTGGATTATTACAGCGTGGCAAAATTTGACgagact
tttgaattttttaaagagtaTAAAAAACCTTCAATATGGAGTTTATTCAA
ACGACACACAgcagaatcaatcaatcatcgaaaaaagaaggaagaaaaaa
aaagaattttgttcACTCGAAAGAAACTGATAAAGAAACATAACATTACA
TTTCAAAGATTTGTACTGACTTTAAAACAAGATGGGTATCATGCATTCAA
TCTTCAAGCAATTTATTGGGAAGAAAGAGATTCGCATTTTGATGGTCGGC
CTAGATGCTGCTGGCAAGACGACTATTTTATACAAATTGAAATTGGGAGA
GGTTGTGCTTTCAATTCCAACCATAGGTATGtgtgattttcttcttttta
taagaacaaaaagctTTCATGACCAAAGCATGAGTTACagacattttaaa
gctttaaaaaatctaaaacactCAAATTCTTAGGAAATCtaacaagaaat
ttaaatttgtaGAGCCACAGGAAGCAATGAAAACCATTTCACATCTAAAA
CCTACActtgattacaaaaatatttggtTGTCTCATATATCTTATTTACA
CAATGGTAAATTataataatatcaaaacatgatCACATGATACCAAGAAG
TATaattcatttttgtttgttttaaaagttCTAACGTAATTCAAAACAAC
ATATCCAAAACCTACActtgattacaaaaatatttggtTGTCTCGTATAT
CTTATTTACACAATGGTAAATTataataatatcaaaacatcaTCACATGA
TACCAAGAAGTATaattcatttttgtttgttttaaaagttCTAACGTGAT
TCAAAACAACAGAGTGATTAAACAGGGTAGATTCTCAATTTTATATTTCT
ATCTAAAGGTTTTAACGTGGAGACAGTAGAATACAAGAATATCAATTTCA
CCGTATGGGATGTTGGTGGTCAACATAAGATTCGACCATTATGGAGACAC
TACTTCTCCAATACACAAGGTAAGTTGTTTCAAACCTGCATGAAGTACTT
AGCACCTTGACGCTTACGAATCAGTGTGAGACAGAACAAAGGTTATCATG
GTCAGAGGCCAAGCGTTAAACGCTCAAAATGAAATTGCATGGATTAAGAA
TAACAAGCCCCTCCCATCCTGACAATTTTAAAGGCGTACTTTTGTCTACT
CCTGTTAATGTTGTTAATAAGTTGATTTCAGATTCTGTCCAAGACTTATT
TGGCCTCAAAAAGTCTGTTCAACATTCACGAAATCAAGTTAAatgctttt
ttatgaaaatgtactctataagaatattcaagACGAAGCAATTATTTACA
AAATACTATAATAATGTAATAATCATAAATTTGGCAACCTAAGAATGCCA
CTTCCAGGgcattttagagcatttttgcCTGTAAATAAATATCCACGGTG
AAATGGATATACACCTATATCCAAattagaaagaaaaatcaatgatGCGT
ACCTTTTCTTTCTCACACACACAGGCATCATTTTCGTAGTGGATTCAAAC
GATCGTGAACGAATAGGAGAAGCCAAAGAGGAGCTGGATAACATGTTGAA
TGATCATGACTTAAGGGATGCTTCACTTCTTGTCTTTGCTAATAAACAgg
taaaaaacaaatagaaagtTGATAAATAGATTCAAGTACTAGTAAAGGTA
TTTTTAGGCCCTCCATCAAACGACCATACCTCAACCCACTAAATTTCCAG
CCAAAATGACCTATTGTGACGGTTGAGTGCAACACTTGCACACACCTTTT
TTGACGTGTTTTATATCTTGTTATTACGAAATTTATGACCCTGTGATGCA
AGGGAGTCGATTTTTGTGACCCTGCCAGAAACTCAATTGCTGTTTTATGG
TTTCACTGTGAGAGACGAGGGTGTAAAAGGACCCTTATGGTCCCCTTATG
GCTCGCCTAAGTGCTCCCCCCGGAGGTGCAACAGCTTTCAACACCAACAA
ACCTTTGGCTAAAGaaatacttaaaaaaattaCCATTTTTTATAGGACTT
ACCAAACGCACTGAGTGCATCACAGATCACTGAGAAATTAGGATTGCTCG
ACATTCGAAATCGGAGTTGGTATACACAAGCTACTTGTGCAGGAAATGGT
AATGGTCTCTATGAAGGACTTGATTGGCTGGCtgaagatttgaagaaaaa
gaaagtcatGTAATATTCGTATGCATACAAACAATGAGATATATTGTATA
TAGTTTAAAATCTGAAACACTAAAATCATTAATCACTAGCACCTGTAAAT
ATAGCTTTCCTTAAATATTTATATAAAACTtgtaattcaaaaaaaatata
tttcattaaaTTAGGCTTTTAAAATGGCAagatattttttaaagtattca
gAAAACAGCATTTTACGTAGTCCAGGATAATTGGATTTCGGCATTAAAGT
TGATGCTGTAAACTCTTTTTATAATAACAGTTATACACTTAAGACCAGCG
TCAAGCATGGAAAGAATAAGTTTAGGCAAATCAAAGTTCAAGGAACCAAA
AATAGGACGTCAAGTTTTAAAATGagttaggcgaga Coding sequence (CDS) from alignment at sc0000100_pilon:9499..12184+ >MSTRG.12896.1.p1 ID=MSTRG.12896.1.p1|Name=MSTRG.12896.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2196bp|location=Sequence derived from alignment at sc0000100_pilon:9499..12184+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGTATCATGCATTCAATCTTCAAGCAATTTATTGGGAAGAAAGAGAT
TCGCATTTTGATGGTCGGCCTAGATGCTGCTGGCAAGACGACTATTTTAT
ACAAATTGAAATTGGGAGAGGTTGTGCTTTCAATTCCAACCATAGGTTTT
AACGTGGAGACAGTAGAATACAAGAATATCAATTTCACCGTATGGGATGT
TGGTGGTCAACATAAGATTCGACCATTATGGAGACACTACTTCTCCAATA
CACAAGGCATCATTTTCGTAGTGGATTCAAACGATCGTGAACGAATAGGA
GAAGCCAAAGAGGAGCTGGATAACATGTTGAATGATCATGACTTAAGGGA
TGCTTCACTTCTTGTCTTTGCTAATAAACAgGACTTACCAAACGCACTGA
GTGCATCACAGATCACTGAGAAATTAGGATTGCTCGACATTCGAAATCGG
AGTTGGTATACACAAGCTACTTGTGCAGGAAATGGTAATGGTCTCTATGA
AGGACTTGATTGGCTGGCtgaagatttgaagaaaaagaaagtcatGTAAA
TGGGTATCATGCATTCAATCTTCAAGCAATTTATTGGGAAGAAAGAGATT
CGCATTTTGATGGTCGGCCTAGATGCTGCTGGCAAGACGACTATTTTATA
CAAATTGAAATTGGGAGAGGTTGTGCTTTCAATTCCAACCATAGGTTTTA
ACGTGGAGACAGTAGAATACAAGAATATCAATTTCACCGTATGGGATGTT
GGTGGTCAACATAAGATTCGACCATTATGGAGACACTACTTCTCCAATAC
ACAAGGCATCATTTTCGTAGTGGATTCAAACGATCGTGAACGAATAGGAG
AAGCCAAAGAGGAGCTGGATAACATGTTGAATGATCATGACTTAAGGGAT
GCTTCACTTCTTGTCTTTGCTAATAAACAgGACTTACCAAACGCACTGAG
TGCATCACAGATCACTGAGAAATTAGGATTGCTCGACATTCGAAATCGGA
GTTGGTATACACAAGCTACTTGTGCAGGAAATGGTAATGGTCTCTATGAA
GGACTTGATTGGCTGGCtgaagatttgaagaaaaagaaagtcatGTAAAT
GGGTATCATGCATTCAATCTTCAAGCAATTTATTGGGAAGAAAGAGATTC
GCATTTTGATGGTCGGCCTAGATGCTGCTGGCAAGACGACTATTTTATAC
AAATTGAAATTGGGAGAGGTTGTGCTTTCAATTCCAACCATAGGTTTTAA
CGTGGAGACAGTAGAATACAAGAATATCAATTTCACCGTATGGGATGTTG
GTGGTCAACATAAGATTCGACCATTATGGAGACACTACTTCTCCAATACA
CAAGGCATCATTTTCGTAGTGGATTCAAACGATCGTGAACGAATAGGAGA
AGCCAAAGAGGAGCTGGATAACATGTTGAATGATCATGACTTAAGGGATG
CTTCACTTCTTGTCTTTGCTAATAAACAgGACTTACCAAACGCACTGAGT
GCATCACAGATCACTGAGAAATTAGGATTGCTCGACATTCGAAATCGGAG
TTGGTATACACAAGCTACTTGTGCAGGAAATGGTAATGGTCTCTATGAAG
GACTTGATTGGCTGGCtgaagatttgaagaaaaagaaagtcatGTAAATG
GGTATCATGCATTCAATCTTCAAGCAATTTATTGGGAAGAAAGAGATTCG
CATTTTGATGGTCGGCCTAGATGCTGCTGGCAAGACGACTATTTTATACA
AATTGAAATTGGGAGAGGTTGTGCTTTCAATTCCAACCATAGGTTTTAAC
GTGGAGACAGTAGAATACAAGAATATCAATTTCACCGTATGGGATGTTGG
TGGTCAACATAAGATTCGACCATTATGGAGACACTACTTCTCCAATACAC
AAGGCATCATTTTCGTAGTGGATTCAAACGATCGTGAACGAATAGGAGAA
GCCAAAGAGGAGCTGGATAACATGTTGAATGATCATGACTTAAGGGATGC
TTCACTTCTTGTCTTTGCTAATAAACAgGACTTACCAAACGCACTGAGTG
CATCACAGATCACTGAGAAATTAGGATTGCTCGACATTCGAAATCGGAGT
TGGTATACACAAGCTACTTGTGCAGGAAATGGTAATGGTCTCTATGAAGG
ACTTGATTGGCTGGCtgaagatttgaagaaaaagaaagtcatGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000100_pilon | genome | sc0000100_pilon:9499..12184 + |
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