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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000099_pilon:1182453..1186034+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12893.1.p2 ID=MSTRG.12893.1.p2|Name=MSTRG.12893.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3582bp|location=Sequence derived from alignment at sc0000099_pilon:1182453..1186034+ (Clytia hemisphaerica_ch_hm2_pilon)
AtattaaaatataatattttatttagaGCAAAAATCATTAATAAGTATGA
CAAGCAGAAGTGAAAGTCTCAAAAAGGTACAAAAGTTGTTATGTTGTAAT
tcttctgaaaatattttgctgtGTTTGAATGAATTTGCATTTTAaaacta
ccttattggaactaattctCACGGGagttaattttgtttttaaaaatttg
accccgtaaaatacaattttttccaattttattgaaaaatttgaaaattc
cctaggaaaatgaaataaatttgtccaaaaagggcaaaaccgcgaaaaat
taaaaacccatgaaatgtaatttttcctattttttttcgGCCGCAAATGT
TAGTCCCAAAAACTCATTATTAACCTTATTCCTTTCATCAGTTTCCTATT
TCTTTACATTGATTTCATTAGAAAATTTAAGCATTAATAGTTATACGTAT
CCCAGATCTGACGTAACCGTTTTCTGTAAAACACATAAGTATCTATCTTT
ATCTGTACTCTATTTTTAGGTCTCCTCTTACCTAGAGCAGCTTGGACTAG
ACAATCTGATTCAGATttttatggctgaaaaggtaatAATATTTGCAAGA
AAAGTTTGCATGAAATTCAACTAATTAGTAAACAACTTTTGGAAAATTCT
TAGATCAGTTTATTCGCATCAACTTGAGGGCTTTCGGGCATATTTTATGT
CAGATCAATTTCACGTTTACTTTATGGTAGCCTCAAAATATGGACTTCAC
CCTTTTTCTGAGTAAAATAGATTTGATGATACTTTTCTGTATTTTTCATT
TCACAGTTTGATGAAACCGCAATAACAAACGCTGGGGATGATGTGTTAAG
AGAGCTTGGAATGGAAGCCGTGGGAGATCGAATTCGTATTCGTGCCATGT
GCAAACAGTCACAAATCACAGATCTTGCAAACAAGAAGACTCAATTAAAG
AAACTTTTAACCACAGGCGCCTCGTCACGTAAGAAAGAACATAAAACGAG
AATCTTGTATGTATCTTGGAAGCATTTCGATAAGAAACAGAAAAAGTACC
AGCTAGTGAAATCCAGAAAAGGAGGTGGTTTAGTAAAATTGACCTTTTTG
CCTTCTGATGATAAAAATACAATCCACAATGCCATTGTTAAACATTTCGT
CGATAACCAAAAAGGCGTCTTAGATGATAACAAAGATGCCTATTTTTTCA
ATctaatgaatgaaaaagaagatcCAATAACTGATATTCTAGAATTTCCT
GACGGAGCAAGGGAACAGTTTACTTTTAATGGCTATTTAGCCATAAGTAA
ACAGACAAGACCAAAGATGTTCCTGTATTCAAAGCAGAAGTCTTCTCAAC
AGAGGATCTTATCCCAttatactttttcaaaagatgaaGATAGCGACGAT
GAAAGTGATGATGAAAATGAGACTGACAATGCTTCTTTTTCAAGAGGAAA
TTCTTCCTCTCCTTTTAATCATATTCCCTCTTCGCATTCCACTCCCAACC
CAGTTGAAGGTTCTCACTTGATCGGGTCTAGTGAGGAAAGACGTCAAATA
AACCTTGAAATTGAACGGGCCTACCAAGCGTCTCTGGCTTCTGATCGTGG
TAGAGACCGTGATGGGGAAAGCACTGAAGGTGATAAAAACCTTACTCAAG
AATGAGAAATGATTGCTCAGGAACAACATGAACAGGAACTCATTGAGCGT
AACATGTTGGAACGTGAACGTATTGAGCGGGACCGAATTGAAAGGGAACA
AGCTGACAATGGCGAACAAGATGCAAACAACGAACGTGATGCTCAACGAA
TAATTGAAAATAGAAAGACTCTTGTGAAACCAGAGCCAGGCTTGGATCAA
CCTTGTGTTTTGGTTCGGGTCCGGCATCCAGTAAAAGGTACTGTAAATCG
ATTATTCTTGGAGGAGGAGAGAATGATGCAGGTGTACTTCTGGATTGGAT
CGTTATCCGAAACTCCTCTATTTTTTGTCCTCAAGGACTGCGATAATAAT
GATTGTTACCCAGATGATAAGATCCGGCAGGGAGTATACAACATGGCCAC
AAGCCATTAATATGTCAAGGGATGGGGAAGTGGTCTTTAAGGAGTTTGGT
TTATTTGAAAATGCTGTTGGCAGTGAAGATTCTGTTGACCCTGCAGACTC
TCAACACACTGACCTTGAAAATGCTGATTCCAAGAACGCTGTTGACACTA
CAAAAGCTTACGAAAATCTTAGAGCTGTCATCATAGTCGAaagagagaaa
atgaaaaatgaagaactttTTATAGTTGGAAGAAAATCTATTGTCAATGA
CATGTTCAATGTATATGAAGATTCTAATCCTGATTCTACACGGtttgttt
ttgagtttaaaaatgAGGACGGTTCGGGGGACGGTGTGAACCGTGATGCA
TACACCACATTCTATAACGAAATTTATGAATTGTTTGAGGGGAACGCCGA
ATGCATTCCCACGCACAAGCTTGACCCCCCTAAATTGAAAACACTTGGTA
AAATTATTACTCATGGCTTTCTCTGCCATGACGTATACCCGATAAAAATA
TGTCAAGTATCTTTGAAACAACAGCTATTTGGTGAAGATGGTGTTGCCGA
AGATGACTTAATCAAATCCTTTCACAGATTTTTACCTCTCTCGGATAGCA
ACCTTTTTAAAGGACTCGAAAATGGAGAGGATATTTCGAAACAATCTATT
ATTGATGTTTTATCGGATGCAGGCATATATGAAATgccaaagaaagaaaa
tattcgaAGGCTAACCATTAGGGCCGCACACTTGCAGTTGATACGAAAAG
CCTGCTTTGAAATGAGTAAAATTGTTGAAGGGATGGGCGATTTTTGGATT
CATATGACTCCTGGATCTTTTGACTCGATTTATCTTACTACCATTCCCAA
TTCCGAAACTTTCATTCAAGCTTTAGAACCTGAAGAACTTTGCCGGGGTG
ATATGAAAGTTTCACTTTGGCTTTATCGTTTTGTTCGCTCATTGGAGTTT
GAGGATCTACTTAATCTGGTACGTTTTATTACAGGTACACATTCATTGCT
GCCAGgtgataaaataaaagtaacatttgtcaaCAGACCCTTGAACCACT
TATTACCTGAATCAAGAATGTGTTTCAAGATATTATTCCTGCCACGTGGA
TTTTTAAACTTCACTGACTTTCGAAGAGACATGTTAAAAGCAATCAGAAA
TGAGGAACTCTACACCGTTTCTGACAACTTTAATGACCTTGTGtcttaaa
tttgtttttattgcaTAATTCATTTGTCTGTTATTTTTGTTGCAATTACT
GCCACTCAAGATATGAGTctgctttattattttttgtttttctgttatAT
TTAGCCTTATGATGGGACTACTGGGATTACATACTATTTTTTGTTATTGC
TTTCCAGTTTTCCTAAAAGATTTTGCCTGTTATATCATATATTACTATTC
TTAATTACAGGACTACTGGCAGGATTGTATACTATTGATACTTGATGCTG
TCCTGAAAGATGTGCTTGTTTAATTTGTTATTCTTTAGGACTGGAATACT
GGTTGCCTGCTAgttttcctgaaagattttgc Coding sequence (CDS) from alignment at sc0000099_pilon:1182453..1186034+ >MSTRG.12893.1.p2 ID=MSTRG.12893.1.p2|Name=MSTRG.12893.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2826bp|location=Sequence derived from alignment at sc0000099_pilon:1182453..1186034+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACAAGCAGAAGTGAAAGTCTCAAAAAGGTCTCCTCTTACCTAGAGCA
GCTTGGACTAGACAATCTGATTCAGATttttatggctgaaaagTTTGATG
AAACCGCAATAACAAACGCTGGGGATGATGTGTTAAGAGAGCTTGGAATG
GAAGCCGTGGGAGATCGAATTCGTATTCGTGCCATGTGCAAACAGTCACA
AATCACAGATCTTGCAAACAAGAAGACTCAATTAAAGAAACTTTTAACCA
CAGGCGCCTCGTCACGTAAGAAAGAACATAAAACGAGAATCTTGTATGTA
TCTTGGAAGCATTTCGATAAGAAACAGAAAAAGTACCAGCTAGTGAAATC
CAGAAAAGGAGGTGGTTTAGTAAAATTGACCTTTTTGCCTTCTGATGATA
AAAATACAATCCACAATGCCATTGTTAAACATTTCGTCGATAACCAAAAA
GGCGTCTTAGATGATAACAAAGATGCCTATTTTTTCAATctaatgaatga
aaaagaagatcCAATAACTGATATTCTAGAATTTCCTGACGGAGCAAGGG
AACAGTTTACTTTTAATGGCTATTTAGCCATAAGTAAACAGACAAGACCA
AAGATGTTCCTGTATTCAAAGCAGAAGTCTTCTCAACAGAGGATCTTATC
CCAttatactttttcaaaagatgaaGATAGCGACGATGAAAGTGATGATG
AAAATGAGACTGACAATGCTTCTTTTTCAAGAGGAAATTCTTCCTCTCCT
TTTAATCATATTCCCTCTTCGCATTCCACTCCCAACCCAGTTGAAGGTTC
TCACTTGATCGGGTCTAGTGAGGAAAGACGTCAAATAAACCTTGAAATTG
AACGGGCCTACCAAGCGTCTCTGGCTTCTGATCGTGGTAGAGACCGTGAT
GGGGAAAGCACTGAAGGTGATAAAAACCTTACTCAAGAATGAATGACAAG
CAGAAGTGAAAGTCTCAAAAAGGTCTCCTCTTACCTAGAGCAGCTTGGAC
TAGACAATCTGATTCAGATttttatggctgaaaagTTTGATGAAACCGCA
ATAACAAACGCTGGGGATGATGTGTTAAGAGAGCTTGGAATGGAAGCCGT
GGGAGATCGAATTCGTATTCGTGCCATGTGCAAACAGTCACAAATCACAG
ATCTTGCAAACAAGAAGACTCAATTAAAGAAACTTTTAACCACAGGCGCC
TCGTCACGTAAGAAAGAACATAAAACGAGAATCTTGTATGTATCTTGGAA
GCATTTCGATAAGAAACAGAAAAAGTACCAGCTAGTGAAATCCAGAAAAG
GAGGTGGTTTAGTAAAATTGACCTTTTTGCCTTCTGATGATAAAAATACA
ATCCACAATGCCATTGTTAAACATTTCGTCGATAACCAAAAAGGCGTCTT
AGATGATAACAAAGATGCCTATTTTTTCAATctaatgaatgaaaaagaag
atcCAATAACTGATATTCTAGAATTTCCTGACGGAGCAAGGGAACAGTTT
ACTTTTAATGGCTATTTAGCCATAAGTAAACAGACAAGACCAAAGATGTT
CCTGTATTCAAAGCAGAAGTCTTCTCAACAGAGGATCTTATCCCAttata
ctttttcaaaagatgaaGATAGCGACGATGAAAGTGATGATGAAAATGAG
ACTGACAATGCTTCTTTTTCAAGAGGAAATTCTTCCTCTCCTTTTAATCA
TATTCCCTCTTCGCATTCCACTCCCAACCCAGTTGAAGGTTCTCACTTGA
TCGGGTCTAGTGAGGAAAGACGTCAAATAAACCTTGAAATTGAACGGGCC
TACCAAGCGTCTCTGGCTTCTGATCGTGGTAGAGACCGTGATGGGGAAAG
CACTGAAGGTGATAAAAACCTTACTCAAGAATGAATGACAAGCAGAAGTG
AAAGTCTCAAAAAGGTCTCCTCTTACCTAGAGCAGCTTGGACTAGACAAT
CTGATTCAGATttttatggctgaaaagTTTGATGAAACCGCAATAACAAA
CGCTGGGGATGATGTGTTAAGAGAGCTTGGAATGGAAGCCGTGGGAGATC
GAATTCGTATTCGTGCCATGTGCAAACAGTCACAAATCACAGATCTTGCA
AACAAGAAGACTCAATTAAAGAAACTTTTAACCACAGGCGCCTCGTCACG
TAAGAAAGAACATAAAACGAGAATCTTGTATGTATCTTGGAAGCATTTCG
ATAAGAAACAGAAAAAGTACCAGCTAGTGAAATCCAGAAAAGGAGGTGGT
TTAGTAAAATTGACCTTTTTGCCTTCTGATGATAAAAATACAATCCACAA
TGCCATTGTTAAACATTTCGTCGATAACCAAAAAGGCGTCTTAGATGATA
ACAAAGATGCCTATTTTTTCAATctaatgaatgaaaaagaagatcCAATA
ACTGATATTCTAGAATTTCCTGACGGAGCAAGGGAACAGTTTACTTTTAA
TGGCTATTTAGCCATAAGTAAACAGACAAGACCAAAGATGTTCCTGTATT
CAAAGCAGAAGTCTTCTCAACAGAGGATCTTATCCCAttatactttttca
aaagatgaaGATAGCGACGATGAAAGTGATGATGAAAATGAGACTGACAA
TGCTTCTTTTTCAAGAGGAAATTCTTCCTCTCCTTTTAATCATATTCCCT
CTTCGCATTCCACTCCCAACCCAGTTGAAGGTTCTCACTTGATCGGGTCT
AGTGAGGAAAGACGTCAAATAAACCTTGAAATTGAACGGGCCTACCAAGC
GTCTCTGGCTTCTGATCGTGGTAGAGACCGTGATGGGGAAAGCACTGAAG
GTGATAAAAACCTTACTCAAGAATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000099_pilon | genome | sc0000099_pilon:1182453..1186034 + |
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