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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000099_pilon:1153592..1155586+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12889.1.p1 ID=MSTRG.12889.1.p1|Name=MSTRG.12889.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1995bp|location=Sequence derived from alignment at sc0000099_pilon:1153592..1155586+ (Clytia hemisphaerica_ch_hm2_pilon)
TTAATCTAAAAAGTTAAGATTAACagatttctaaattttacagaaCATTT
TCACGGCTATTAGAgaagagaaaataatttgtgAAAAGAGCACTTTGCAT
TCTGAAGCGAGATCGCAGTTATTAAACATGGCAACAACACTAACAAGTTC
ATCTTTCTTTGGTGGACTTGATAAAACCAGAAACGACATCGATAAAGTTG
TCGAATATTATGATCACCACGCCAATAATTACAATGCATGTCTTCACAAC
AGTAGATATACGGAGACCACAGATTATTGTGCTGACTTGTTGAAAAGAAC
ACTAGgtatggtttgagattttttataTAATGTTTTCATCGATACCCATG
AAATTGACGTCTGTGACATGAATGACcaggctggtcattaaaatacaata
gttaaatcaaaacaaatctgaATTACAAAAGTTGCGAGAGTTTGCAGAAT
GTAAAATGTATATCTCCTAATCATAATGATGTCATACATGATGTATGTCC
TGCTCCCATCGAGAAACATCTGAATTcccgccatcttgaaatttataatc
tcaattgatttttaattattcaaccaGGCTGttttttttACTAGCGATTC
TTTCGGCAAGTAATTCACCTAAACAAACTTGGGCGGTAAATATGAGATTC
TGGTAGAGTAGAGTTGCGTGCGGAATTGTACAGTTCTTTGCACTGTTAca
tttatgttttgaaattttgctgctttgatgattatgcaagtttccctcca
ctgatgcaagttatctGACTTCACGCTATACATATTCTTATGAAACTTTG
AACTCCACTGATTTCAAAatgtgataaaatattttttaactcttttgGAT
CAAAAGCTTAACCCTCAAAAAAGATCCAAACTGACGATAAAGTGCAAAAA
ATGGAGCTATAACTTTTGACCCAAAAATGATATGGGAGATATAAATACTA
TTTGAGATCAGCGGggttcaaagttttaaaaaagcaTACAACAAAATTTT
TCGTCAGATTAGGAAAAAggtttctttcttcttcatttcttaatttttaa
gaTGTTTATTTCAGGAACCATAAAAAGCTTACACGGAGCCGCTCAAACTt
atcttttcattcttttttgtcacttgtTATTTCAGGGGTAAATTTTCAAG
AGTGTGAAATTCTTGATCTTGGTTGTGGATCAGGGAAGACAGGAGCCTCA
TTACTGAAGTTGGGTTTCCAGAAAATAGATGGTATTGATCCTTCTACGGA
AATGCTTGAAGTAGCAAAAGAAATGGGCTGCTACCGTAACTTGGTTGCTG
GAAAGCTGACAGCAGAAGAAAGACTACCCTATGCAGACAACAGCTTTGAT
GGGATCCTTTGTGCAGGGTGTTTCACTGTTGGCCACATAGAGGTCAAAGA
TGGTATACCGGAGCTTTTAAGAGTCTTACGCACAGGTGGTGTAGCTGTTT
ATACCATTTCGTTTACATTGGAGAAGGGAAAAGTGATGCAAGAGCATGCA
CCGTACGTCACTGGTAACGAGATGGAAATTCAAAGCATCGAGAAACATTT
TTATCACATGATCGGAGAAAACCCTGTTTATTGTCAAATCTActgtataa
aaaaattgtaatttttcacAAGACTTTTGTTGAATGAACACTGATTTATT
TCTCTTTCAAAACTTAATACTTCTTATAAAACAGtgcatacagtatgtgg
cccccaaaacggcgatcaaatttgaaatttttctcaaatctagaggaaaa
gagattttacaaaaatttttgctgcatgaaaacctttaacatctctactt
tatttcctggtagttctttttcaaaattttcaatttcaacaatatttttc
aatcgcttaaagataggtagcttttttctaatgccccccaaaacggaggt
ttgaaattttagcgatttctcgagatatttttaagatatgaataaaaaat
tttgaccgtagttttgaagtatgatttagagtgttttgggcataa Coding sequence (CDS) from alignment at sc0000099_pilon:1153592..1155586+ >MSTRG.12889.1.p1 ID=MSTRG.12889.1.p1|Name=MSTRG.12889.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1308bp|location=Sequence derived from alignment at sc0000099_pilon:1153592..1155586+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAACAACACTAACAAGTTCATCTTTCTTTGGTGGACTTGATAAAAC
CAGAAACGACATCGATAAAGTTGTCGAATATTATGATCACCACGCCAATA
ATTACAATGCATGTCTTCACAACAGTAGATATACGGAGACCACAGATTAT
TGTGCTGACTTGTTGAAAAGAACACTAGGGGTAAATTTTCAAGAGTGTGA
AATTCTTGATCTTGGTTGTGGATCAGGGAAGACAGGAGCCTCATTACTGA
AGTTGGGTTTCCAGAAAATAGATGGTATTGATCCTTCTACGGAAATGCTT
GAAGTAGCAAAAGAAATGGGCTGCTACCGTAACTTGGTTGCTGGAAAGCT
GACAGCAGAAGAAAGACTACCCTATGCAGACAACAGCTTTGATGGGATCC
TTTGTGCAGGGTGTTTCACTGTTGGCCACATAGAGGTCAAAGATGGTATA
CCGGAGCTTTTAAGAGTCTTACGCACAGGTGGTGTAGCTGTTTATACCAT
TTCGTTTACATTGGAGAAGGGAAAAGTGATGCAAGAGCATGCACCGTACG
TCACTGGTAACGAGATGGAAATTCAAAGCATCGAGAAACATTTTTATCAC
ATGATCGGAGAAAACCCTGTTTATTGTCAAATCTActgtataaaaaaatt
gtaaATGGCAACAACACTAACAAGTTCATCTTTCTTTGGTGGACTTGATA
AAACCAGAAACGACATCGATAAAGTTGTCGAATATTATGATCACCACGCC
AATAATTACAATGCATGTCTTCACAACAGTAGATATACGGAGACCACAGA
TTATTGTGCTGACTTGTTGAAAAGAACACTAGGGGTAAATTTTCAAGAGT
GTGAAATTCTTGATCTTGGTTGTGGATCAGGGAAGACAGGAGCCTCATTA
CTGAAGTTGGGTTTCCAGAAAATAGATGGTATTGATCCTTCTACGGAAAT
GCTTGAAGTAGCAAAAGAAATGGGCTGCTACCGTAACTTGGTTGCTGGAA
AGCTGACAGCAGAAGAAAGACTACCCTATGCAGACAACAGCTTTGATGGG
ATCCTTTGTGCAGGGTGTTTCACTGTTGGCCACATAGAGGTCAAAGATGG
TATACCGGAGCTTTTAAGAGTCTTACGCACAGGTGGTGTAGCTGTTTATA
CCATTTCGTTTACATTGGAGAAGGGAAAAGTGATGCAAGAGCATGCACCG
TACGTCACTGGTAACGAGATGGAAATTCAAAGCATCGAGAAACATTTTTA
TCACATGATCGGAGAAAACCCTGTTTATTGTCAAATCTActgtataaaaa
aattgtaa
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000099_pilon | genome | sc0000099_pilon:1153592..1155586 + |
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