MSTRG.12885.1.p1 (mRNA) -

Overview
NameMSTRG.12885.1.p1
Unique NameMSTRG.12885.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000099_pilon:1086451..1087132+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.12885.1.p1 ID=MSTRG.12885.1.p1|Name=MSTRG.12885.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=682bp|location=Sequence derived from alignment at sc0000099_pilon:1086451..1087132+ (Clytia hemisphaerica_ch_hm2_pilon)
cgaataatggagcttatcgaatagtagaatgtcgaattagagatcGTTAA
CTGTACACCATTGCTATTTCCTCAATTCAGattaaacaataaaacaatgC
AGTTTTGCTTGGCTCCAATTTTCGTTTGCCTCACCACCATTTTATCGTCG
AGCTTTTCAACCACCATCGACAAACGAGACATAGTCGACCTATCACAGAA
TACAGGGTGTACCATCAGGGCTTATATACTGTGTCACCGAGTTTTGAATG
TAGAAGCATTCTTTCAGTGCACGGAGAGAAAATTAACAGATTGTCGAATG
ATGGATAAACATTGTGATATCAAAACAGTTATtcataaaacacaaaaaat
gtgTTACGGGATTGGTTTTCGAAGCATTTGCAGAGATGTTCATTACAGCT
ACGAAAAGTGCCTTTATCCCACAAGACACGCTTGATCCCACAAAACACAC
TTTATCCCACAAGACATATTTAATAAACTTTGGTTTtcagaaattatatt
tttgttggtAATAGATGTTTATAACTTTATTGTAAGAAACTTGTACTTTT
ATCTCACCCCTGCATAAATAAGAGCTTGAAATTATATTCTATGTTTTTTA
tatctatccgcagacacgtgtttcaTCCTTCCCAATATTCATCAGTGCGA
CTTGGATAAGCGAGTATAGACTGCTGTATTCA

Coding sequence (CDS) from alignment at sc0000099_pilon:1086451..1087132+

>MSTRG.12885.1.p1 ID=MSTRG.12885.1.p1|Name=MSTRG.12885.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=339bp|location=Sequence derived from alignment at sc0000099_pilon:1086451..1087132+ (Clytia hemisphaerica_ch_hm2_pilon)
atgCAGTTTTGCTTGGCTCCAATTTTCGTTTGCCTCACCACCATTTTATC
GTCGAGCTTTTCAACCACCATCGACAAACGAGACATAGTCGACCTATCAC
AGAATACAGGGTGTACCATCAGGGCTTATATACTGTGTCACCGAGTTTTG
AATGTAGAAGCATTCTTTCAGTGCACGGAGAGAAAATTAACAGATTGTCG
AATGATGGATAAACATTGTGATATCAAAACAGTTATtcataaaacacaaa
aaatgtgTTACGGGATTGGTTTTCGAAGCATTTGCAGAGATGTTCATTAC
AGCTACGAAAAGTGCCTTTATCCCACAAGACACGCTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.12885MSTRG.12885Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12885.1.p1.exon1MSTRG.12885.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12885.1.p1MSTRG.12885.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000099_pilongenomesc0000099_pilon:1086451..1087132 +