|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000099_pilon:982505..986527- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12875.1.p1 ID=MSTRG.12875.1.p1|Name=MSTRG.12875.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4023bp|location=Sequence derived from alignment at sc0000099_pilon:982505..986527- (Clytia hemisphaerica_ch_hm2_pilon)
TACAAAAACTTTATAACTAATACAAAACTTTGTGTTTAGAATGAATTGTG
TTTGACATTTAAATCCAGAATTTCTATCAAATCATAGATTCTAATTTATA
AACATCAAACTATCGACGAAGAAAACCACAACATTCAAGAGCAATGATCC
AGCTAATACGCAAGAAGGTATGATTGCAGTCTTTAATTTCAAAACTTTTA
AATTCAGAATATTTTTTCAAACCTAATTAGAATTTTTTCTCGAGTTTTTA
AACTTCAAAAAAAACATATGTAAAAAATAGGGAATTATATGATAGGCTTT
GTTTTTGGTACATTTGGAAAGTGATTCTTCCGAAGAAATTGATTCATGCC
ACCTTAAATCAAGTGACTGAGATTTAATAATTTTCATCCCCAAAATAAAG
TTTTCGTTATCATCTCACTGAAAATTGTTTCATTTTACACACCCCTGTCT
CACAACCCCGGTGGAGCTTTTTTCGTCAGCAGGGATAAAAATTCCTATTA
AAATCCCAATGGGATAGAAATTCTATTGGTTAAAAGATCCAATGGGAATG
GTTTTTGTGTGGAATTTTTAAACATTGAATTTCGAATGGGGATGAAGTCG
AAGTCAATTTCCTAGTGAGGCTGAAATTCGAAGGTATTTTCCCACCGGGG
ACGAAATTTTTGCCCAGTCAGTCTGGCAGTCTGTGACACAGGGATGTATT
TACGATAGATGTTGGAGAAACTTTTCGCATTGTTTTTTCTGTTGAGAGGT
TTTTATAATTCTTAAAATCTTAAAGGCAGACTTAACTACAACACTCAAAG
ATCCTCAAATATCCGGTAGCTCAAAAAGCAATTAAATCATATCCTGCATA
CTTTATTAAAAGCTATAGAGAAAATATTCTCATAATGGTGGCTTGACAGC
GCTTTCAAAGTAAGCATGTTTAAGGAATGACTAGGTTAGTTGAGACAATT
TCATCATAAAGAACCATAGTATAATGAACCATCAGTAAATCACGTGTTAG
GTTTTCCTTACAATACAGACTGTGACGACAGATAGCTAGAACAGCATGTT
GAATTTATGACTGGGCTGGTTGAGACAAATCTCATTATCAGGATCGGTTA
AAATGGTTCTTTAAACATACATTACGTCATTTTCATACTAAACTTTCCAA
AAATACTCCAGTCAATGTAATGCCAACTTTACTATACATAAGACGTAGTG
TTGTAATATAACTCGTCTGATATAAGGAGCTTTAATTTAGGAAACATGAT
TCGATAAAGCAAAAATAATAAAAATTCTTTTTTTGTACTAAAGACAACAA
ACTGTCTGAGACGACCAGACATGCTTATCTCAATTTATCTACCAATCTTT
GAGCTGAGTTGGCACCTTAGCTCCCTTTTAAAGATAGCACAAGGCACCGT
TATTTAATCCTCGAGTCACTTTAAATTAAGTCAATTTATCTAACGGTACT
CTAAGATTGCTTTAATCATATCGTGATTAGATCACGACAGATCATTCAAG
TTTTATAAGAACTTGATTTTGTGAGATTTGAAGGTGTTTTAGATGGATTT
TAAAAAAAGAATGATTAATATTTCCGATTTTATTGTTTGCACCACAATTT
CTAACTAATATGATGCAATATTGTATAATATTTACAATCAATTATACGTT
CTTTGACTCCTAACCAACACCAAACAGCCCTGTCTTAAGTGACCCTGTGA
GAACTCTTCTGCAGTCGGGGATGTAAAGAAAAGGGATGATTTGGCTGCAG
AACATTAATGTCTTTCTAAGAGGGAATTTGAGATGGTGGAGAGTTCTCTA
AGGGTGGTTACTGCAAAATTGATGATGACAAGTATTTCTTCGTGACTATT
CGTTTTAAGGAAGCAATTCCACTCCCTAAAATAATTTGAGTATACATCTT
TTGCTACCACTGTTGCACTGGAAAGACTCTGAAGTGGTCAAAATATGCCG
TTGGCAAAGAATCCCTTTTACTTGTGACTTTGGCACAGGGATGCATTCGG
AACCTTATAATAGAAACTTCTATTTGAAAAATGTTAATCAAGCAGTGTTT
ATAACGTGATGCATTATCAATATTAGCTCTCAGAGCTTAATTGGATAATT
ATAGGCTTAGCATTGCTTTTTAATTAAGATATTAAGGCGTTTGTCAGGCC
ATATTGATCAATTCTCATTCTCCGCTCTAAGTTCCATTACAAAAATGATA
AAGCTGTTCAGATTGTAAAAGAATGACTTATGTATGTGCTTCACTTGGCA
TCGTGTTTGTTTATATATTGACTTTCTCGCAATACTAGTTGTTTTGGTAC
TAAAAATACGTTGATGATTTCTTTCCAGTCATTTTAGATGAAGAAAACAC
ATGTGTGAAGTTAAACACTTTTTTCTCTCCATACTTTTCGATCTCGGTTG
CTAAAAGTTCTAATATTTGTGTTTGTTGTATTTGAAGCATGTGGGACATA
TTTCACAGCTCAAAATATAACATGAAGTCAAAAACAGCCCTTGTTGCTCG
GTTTGGCACTGACCTTTATATACCCCTGGACCAATCTATATCCGCCATCT
TTGATCGAAGTTCTTTTTGAAGTGGTACCCGTAAAGAAGCCATTGCAGTG
TTAAAAGTTAACGTCTAACACGGCGCAACATCATCAAAAATATTCAGAGG
AACGTAGATCTAGCGCTGTCGATGCATTTACACCGCTATTGAGTAGTGCC
GCAATTAGGGTACCACTTTTCAAAAAACTCCAATCAAAGATTTTTCTTGG
CCGGGATTGAGAAACTTGGAAGTATTGAAATTTTCTAGCATGATGAATTA
ATTCATACATTCCTTTATCTTTTCCAATAGGTCGCCAAAATGAAGGATGG
AATTCTAATCCGACAGAGTAGTCTACCAGACCGTTCCAACGTTAAATCTG
AAGACAGTCTACCTAACTTTACTACAGATGGTAATAGAAACGAGTACGTT
TACAGTTCTAACGAATACACATATACATCAAGAGTTGCGCAGACTTTGAA
ATTGAGTGTTACAGACTACGATGATAAGGCTGATACACAGACTAGCCCAA
TCAAGATTGACAATACGCATGAAGAGGAGATATTTTTCAACACTCCACGG
GGTGATGAGAGTCCAATGAGTCTGAAGAGTCAGAGCAGCAACTGTAATAA
TACAACTTATTCATTGAAAACTAAAGAATCGAGAAAAATATCAAATTCCA
GAACTTCATTACGTAAAGCTTCCGTGGCACGAATCGGGAACGCGTTCCGT
GAGATGCAAAATACGATCAAGACACGGAAATCACGGTACAGCACTAAACA
TGATTTTCCGGGGAGACAAAGAAGTCAAAGTACTGATAACTTTATAGACA
AGAAACCTGTTTCTAGATCCGCATCTCTTCCGAATATTAAATCGGGGAAA
GAAAATCGGAAAACTGGATTATCTAAGAAATCGGTTGATCACGTGTTTAG
AAAATTATCAAATCAAAAACAGAATAAATCGACCCCAATTCTAGACTTTG
ATTCTACTGATGTTATTTCTTTTCCATCCAATCGGTTAGAAGGATATAGA
ACCAAAAGTAATGACCAGATATTATGTGGACTCGAAAATCGGTTGACCCC
AAGTCCCAAAAGACATAATAATCGGAAACAAAGTAATAATGATTTATTAC
CCAATTCGGAAGATCGGGATAATTCGACTGCAAGAAGGAATGGAAATCGG
GATAACACGCTAACCGAAACGGAAGATATGGATCGTTTAGAACGTCGGCG
ATTAAAAGGCCGAAGTTCGTCGTTACAGCTACCGAACGACGTTTTCGTTA
GACATTTGAAACGAGAACGAAGCTCGAGTACCGATAACGAAGACCGAGTA
TTCTCGTTTGATAAACTCGTTGCACGACGACTAAACTCGTCAAAAGAGAC
ACAGCTGTGTGAAACGGATTTATAGCAGGTGACGTGCTCAATATTTCTTA
TATTGAAAAATATTCTACTTTTAATCTTAAGATTATTTCAATTTTCAAAT
ACAATTTTAAATTCGATACTTTA Coding sequence (CDS) from alignment at sc0000099_pilon:982505..986527- >MSTRG.12875.1.p1 ID=MSTRG.12875.1.p1|Name=MSTRG.12875.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2238bp|location=Sequence derived from alignment at sc0000099_pilon:982505..986527- (Clytia hemisphaerica_ch_hm2_pilon)
GTCGCCAAAATGAAGGATGGAATTCTAATCCGACAGAGTAGTCTACCAGA
CCGTTCCAACGTTAAATCTGAAGACAGTCTACCTAACTTTACTACAGATG
GTAATAGAAACGAGTACGTTTACAGTTCTAACGAATACACATATACATCA
AGAGTTGCGCAGACTTTGAAATTGAGTGTTACAGACTACGATGATAAGGC
TGATACACAGACTAGCCCAATCAAGATTGACAATACGCATGAAGAGGAGA
TATTTTTCAACACTCCACGGGGTGATGAGAGTCCAATGAGTCTGAAGAGT
CAGAGCAGCAACTGTAATAATACAACTTATTCATTGAAAACTAAAGAATC
GAGAAAAATATCAAATTCCAGAACTTCATTACGTAAAGCTTCCGTGGCAC
GAATCGGGAACGCGTTCCGTGAGATGCAAAATACGATCAAGACACGGAAA
TCACGGTACAGCACTAAACATGATTTTCCGGGGAGACAAAGAAGTCAAAG
TACTGATAACTTTATAGACAAGAAACCTGTTTCTAGATCCGCATCTCTTC
CGAATATTAAATCGGGGAAAGAAAATCGGAAAACTGGATTATCTAAGAAA
TCGGTTGATCACGTGTTTAGAAAATTATCAAATCAAAAACAGAATAAATC
GACCCCAATTCTAGACTTTGATTCTACTGATGTTATTTCTTTTCCATCCA
ATCGGTTAGAAGGATATAGAACCAAAAGTAATGACCAGATATTATGTGGA
CTCGAAAATCGGTTGACCCCAAGTCCCAAAAGACATAATAATCGGAAACA
AAGTAATAATGATTTATTACCCAATTCGGAAGATCGGGATAATTCGACTG
CAAGAAGGAATGGAAATCGGGATAACACGCTAACCGAAACGGAAGATATG
GATCGTTTAGAACGTCGGCGATTAAAAGGCCGAAGTTCGTCGTTACAGCT
ACCGAACGACGTTTTCGTTAGACATTTGAAACGAGAACGAAGCTCGAGTA
CCGATAACGAAGACCGAGTATTCTCGTTTGATAAACTCGTTGCACGACGA
CTAAACTCGTCAAAAGAGACACAGCTGTGTGAAACGGATTTATAGATGAT
CCAGCTAATACGCAAGAAGGTCGCCAAAATGAAGGATGGAATTCTAATCC
GACAGAGTAGTCTACCAGACCGTTCCAACGTTAAATCTGAAGACAGTCTA
CCTAACTTTACTACAGATGGTAATAGAAACGAGTACGTTTACAGTTCTAA
CGAATACACATATACATCAAGAGTTGCGCAGACTTTGAAATTGAGTGTTA
CAGACTACGATGATAAGGCTGATACACAGACTAGCCCAATCAAGATTGAC
AATACGCATGAAGAGGAGATATTTTTCAACACTCCACGGGGTGATGAGAG
TCCAATGAGTCTGAAGAGTCAGAGCAGCAACTGTAATAATACAACTTATT
CATTGAAAACTAAAGAATCGAGAAAAATATCAAATTCCAGAACTTCATTA
CGTAAAGCTTCCGTGGCACGAATCGGGAACGCGTTCCGTGAGATGCAAAA
TACGATCAAGACACGGAAATCACGGTACAGCACTAAACATGATTTTCCGG
GGAGACAAAGAAGTCAAAGTACTGATAACTTTATAGACAAGAAACCTGTT
TCTAGATCCGCATCTCTTCCGAATATTAAATCGGGGAAAGAAAATCGGAA
AACTGGATTATCTAAGAAATCGGTTGATCACGTGTTTAGAAAATTATCAA
ATCAAAAACAGAATAAATCGACCCCAATTCTAGACTTTGATTCTACTGAT
GTTATTTCTTTTCCATCCAATCGGTTAGAAGGATATAGAACCAAAAGTAA
TGACCAGATATTATGTGGACTCGAAAATCGGTTGACCCCAAGTCCCAAAA
GACATAATAATCGGAAACAAAGTAATAATGATTTATTACCCAATTCGGAA
GATCGGGATAATTCGACTGCAAGAAGGAATGGAAATCGGGATAACACGCT
AACCGAAACGGAAGATATGGATCGTTTAGAACGTCGGCGATTAAAAGGCC
GAAGTTCGTCGTTACAGCTACCGAACGACGTTTTCGTTAGACATTTGAAA
CGAGAACGAAGCTCGAGTACCGATAACGAAGACCGAGTATTCTCGTTTGA
TAAACTCGTTGCACGACGACTAAACTCGTCAAAAGAGACACAGCTGTGTG
AAACGGATTTATAGATGATCCAGCTAATACGCAAGAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000099_pilon | genome | sc0000099_pilon:982505..986527 - |
|
