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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000099_pilon:962305..965573+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12872.1.p1 ID=MSTRG.12872.1.p1|Name=MSTRG.12872.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3269bp|location=Sequence derived from alignment at sc0000099_pilon:962305..965573+ (Clytia hemisphaerica_ch_hm2_pilon)
AGTTTAGTTGGTATCATAGTGAGGCCTCCCGAAGGTAAGAAACAATGAAC
TACACTTTTTATCTCAATTAATTTATGGCTTTCAACAACTTATGAATTAA
ATGTACACAACGCAGCTATTCTTCTAGATTTTTTAAGTAACTTTAATTAA
GTGTTCTCTCATATGGTCTTGTATTAGCTACATATACTCTCTGCAGACAT
TATCAAAGCCGTCATTTAATTcgtatattttacagaccatgaAACTCAAC
ATCAGCTACAACAAAGTTCGTTACATTATTGAAGTATCACCAAACGAAAA
TGTTttacaaatcaaacaaaaggtTCTTCAGGCGTCACAACCGCCCATTC
AGTGTAACGCCACACATGCAACAAAATCGGAAACCATGTTATCTTTTAAT
GGTACCATCTTGGATGATGATATTGTTGTTAGTGACGTTGGCTTGGTATC
TGGAAACACGTTGCTATATAAACACGTGGAACTTGCACAATGTAAACTAA
AAGTTCATGTTGGTTTCTTGAAAACAGTTATCGAGCTTGGTGCGGAGATT
GATTTTGAACAAACTACGATAGGTagagacaaaatcttttcaaagacTTT
ATCGGTATATTCGTCTGTTCATTCCTTACAGTGAATTTTGAACACATACA
AAATGGGTGATAGATATCTCATGTCAACATACCAACAACGTCTAAATGGT
AAACACCcaataattttcataaaactcaaaagttgttttcttttcctttt
aggTGATGTTCGAATGATGATTCAGGACCATTTAGGAATTCCCATGAGTA
TCTTTTATTTGACGCAAATGAATGGTGATGCTCTAGAGCTTTATGATATC
CACACTCTAAGATATTACCAAATCAAGGTAGGTGCTGCGCTTGCCcataa
ttttaaaagaaaacgtCCATTTTACCTGTAAAAGCAACCCTGTCATCATA
AGGAGTTGGCCATATTTGCCCTGTTTTGAACTTTGGacttttccaagaat
tttgctcttttgattgacagattgttTTTCCTTCTTTCATAATCCAGGGA
TactgaaattaaaatttatggTTTTTGCTTTTGGTATTCGCTTTAAGTGT
TCAATGTAATCTTTTTGCAGGAGCAAGATGAGCTGATCCTCACTGTATGG
AAGCACACGAAAGGCGTCATTGTCGGTGCTTTAAACGCCGACATCTCAAA
GACAATGTCAAGTTTACCAAGTTTCCATGACAACCCTGCGTTAAACAGAT
ATTTACTGAGAACCATTTTGTTCATTGCGTCACATTTCAATTTCACCAAA
CTGGCAGCTTTAGCTTTGCAACGAGGCATAAGGTAAAGTGTTAACAAGTG
TTTCTGGGAATCTCGGTTCTTGTCGGTTAACAGTAGTGACTCGACCTTTT
AACCGGAAAGGTTTACGTATTATCAAACttcgtcaaatttaaaaactatG
CTTTTGCTATCGAAAATACAGAAAGGCACCTTTGGGATCAGTAAAACTCG
TTTCTTATCTTTTAGATGCGAAGAACCCGTAGGCGAACACTGTTCACGCC
AATGGTGCTCCACCCAATCCCACCCTGGCATCTTCAAAACGCCCATCCAT
CAAGCCGCCCAAATGGGCAGTTTTCAATGTCTCAAAATGTTCGTACGTCA
CAGTCCGTCTTCTATGATCGCTCGAGATGCTTATAAAAGAACACCAAGCA
ATTACGCGTCCAAATATAAGAATTTCGAATGCTGGAAGTTACTTATCGCT
TCTCAATTTGTACATTCGCGTATCAACGGTTTTAGCTTAGCTTCACATGC
TCGGATAATGAAATGGTGCTCAGCAGCTAAAGAAAGAGTCAGTTATTTCA
AAGGAGAAGACACAAAGCACTCCTTACTGCTACATTCAACCATAGGGAAA
GAAAACAATACCTACCTAGGGAATGAGATCACTGTAGCAGGATTTAACCA
TGGGAAATCAATCAAGAAATGCCCTTGCAACCATGAACCTTTAAAACCAC
TACCTAGGAGAAACACCAACCACAAGTTTGAAGTTAAATTCCCTGACGAG
GACATTGAAATTCCCCATAGGGACTCGATTCTTTCACgaagaaaatcaaa
agccaTAAGACCtgattcaaaatcaaaacctaTTCTTAAAGACTCCCACA
CTAAATCGTTCAAACCGACAAACATCCAAAACAATCGAAAAGAAAGAGGG
AAAAGTCTAGATTTGAATGACGCTAAACTTGATTTCCCCAAAACAGAACC
GTCCACAAGAAAAGACAGCCATAAAAAACTGCCTACGATACGAAAATATA
AAACGTTACCCAATATAGTAACTGAAACTAATAACTCAAAACATAAGTCA
ATAATCCGAgacaatgcagtcaaaacagaGACAGGAGCGAAAATTGACAA
TGATGTGGAGCCAGATGAAAACGAATCAGTTCTCAACACTTCTCTACCGC
AATTACAAATGGCACACATGAAAGAGAGGCTGAGCAATCGAAGGAGTTCA
TCTTTATCGAATCTAGCTTttttacaacaagaacagcAAAATGTACATAA
TATCATTCTTGAAACTACGGGAATGTCTTCTAAAGACTTGGCAAGCAAAT
GTTTACAACTTGGTGAAAGTTTCACTGGACGATCTTGGATGAGACAATTC
AGAATCGCCATGAATAGCAGCACCAACAGGATTAAGAGAGGTCGACCTAA
GACTAGTGTTTTACATTAAGCTAGTAAGCTAGTCTAATATCGACTATTCT
TTTCTAATTTCGTCAACCCTtttcacacccccttctcacagacccacggt
ccccggtggaaaattacccttcaatttttgtccccaccgaaaaatatcaa
ataaaccaatcctcactgcaaaatgtttGCATTTTTTCCCATCCTCATCC
CAGCcgtaaaaaaataatatcaatccccatcgagtttcagtccgttattc
tcattcccactggctgaaaaaatcctactgggtctgtgagaagggggtat
atTTTCAAAGTTACTAATTAAAGTTACCTTTTCTCTACATAGCAGTGAgt
gtgaaaaacttttttctatcgGTAACCCCGCATATCCTATCTTTAGGGTT
GTTAAAAGGATACAGATTGCGAAAGGCTGTAAATTTTTAACTGTATTTGG
TAATATTTCACTCTTAATATTTCAATCATTTCAACAAGCACAAGACCACT
ATTTCTATTTAATTCAATTTCTATCAAACTTTGCAGCCTTTTTGGTTTCC
ACTACAGATTATTTTGAGC Coding sequence (CDS) from alignment at sc0000099_pilon:962305..965573+ >MSTRG.12872.1.p1 ID=MSTRG.12872.1.p1|Name=MSTRG.12872.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=7500bp|location=Sequence derived from alignment at sc0000099_pilon:962305..965573+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaAACTCAACATCAGCTACAACAAAGTTCGTTACATTATTGAAGTATC
ACCAAACGAAAATGTTttacaaatcaaacaaaaggtTCTTCAGGCGTCAC
AACCGCCCATTCAGTGTAACGCCACACATGCAACAAAATCGGAAACCATG
TTATCTTTTAATGGTACCATCTTGGATGATGATATTGTTGTTAGTGACGT
TGGCTTGGTATCTGGAAACACGTTGCTATATAAACACGTGGAACTTGCAC
AATGTAAACTAAAAGTTCATGTTGGTTTCTTGAAAACAGTTATCGAGCTT
GGTGCGGAGATTGATTTTGAACAAACTACGATAGgTGATGTTCGAATGAT
GATTCAGGACCATTTAGGAATTCCCATGAGTATCTTTTATTTGACGCAAA
TGAATGGTGATGCTCTAGAGCTTTATGATATCCACACTCTAAGATATTAC
CAAATCAAGGAGCAAGATGAGCTGATCCTCACTGTATGGAAGCACACGAA
AGGCGTCATTGTCGGTGCTTTAAACGCCGACATCTCAAAGACAATGTCAA
GTTTACCAAGTTTCCATGACAACCCTGCGTTAAACAGATATTTACTGAGA
ACCATTTTGTTCATTGCGTCACATTTCAATTTCACCAAACTGGCAGCTTT
AGCTTTGCAACGAGGCATAAGATGCGAAGAACCCGTAGGCGAACACTGTT
CACGCCAATGGTGCTCCACCCAATCCCACCCTGGCATCTTCAAAACGCCC
ATCCATCAAGCCGCCCAAATGGGCAGTTTTCAATGTCTCAAAATGTTCGT
ACGTCACAGTCCGTCTTCTATGATCGCTCGAGATGCTTATAAAAGAACAC
CAAGCAATTACGCGTCCAAATATAAGAATTTCGAATGCTGGAAGTTACTT
ATCGCTTCTCAATTTGTACATTCGCGTATCAACGGTTTTAGCTTAGCTTC
ACATGCTCGGATAATGAAATGGTGCTCAGCAGCTAAAGAAAGAGTCAGTT
ATTTCAAAGGAGAAGACACAAAGCACTCCTTACTGCTACATTCAACCATA
GGGAAAGAAAACAATACCTACCTAGGGAATGAGATCACTGTAGCAGGATT
TAACCATGGGAAATCAATCAAGAAATGCCCTTGCAACCATGAACCTTTAA
AACCACTACCTAGGAGAAACACCAACCACAAGTTTGAAGTTAAATTCCCT
GACGAGGACATTGAAATTCCCCATAGGGACTCGATTCTTTCACgaagaaa
atcaaaagccaTAAGACCtgattcaaaatcaaaacctaTTCTTAAAGACT
CCCACACTAAATCGTTCAAACCGACAAACATCCAAAACAATCGAAAAGAA
AGAGGGAAAAGTCTAGATTTGAATGACGCTAAACTTGATTTCCCCAAAAC
AGAACCGTCCACAAGAAAAGACAGCCATAAAAAACTGCCTACGATACGAA
AATATAAAACGTTACCCAATATAGTAACTGAAACTAATAACTCAAAACAT
AAGTCAATAATCCGAgacaatgcagtcaaaacagaGACAGGAGCGAAAAT
TGACAATGATGTGGAGCCAGATGAAAACGAATCAGTTCTCAACACTTCTC
TACCGCAATTACAAATGGCACACATGAAAGAGAGGCTGAGCAATCGAAGG
AGTTCATCTTTATCGAATCTAGCTTttttacaacaagaacagcAAAATGT
ACATAATATCATTCTTGAAACTACGGGAATGTCTTCTAAAGACTTGGCAA
GCAAATGTTTACAACTTGGTGAAAGTTTCACTGGACGATCTTGGATGAGA
CAATTCAGAATCGCCATGAATAGCAGCACCAACAGGATTAAGAGAGGTCG
ACCTAAGACTAGTGTTTTACATTAAatgaAACTCAACATCAGCTACAACA
AAGTTCGTTACATTATTGAAGTATCACCAAACGAAAATGTTttacaaatc
aaacaaaaggtTCTTCAGGCGTCACAACCGCCCATTCAGTGTAACGCCAC
ACATGCAACAAAATCGGAAACCATGTTATCTTTTAATGGTACCATCTTGG
ATGATGATATTGTTGTTAGTGACGTTGGCTTGGTATCTGGAAACACGTTG
CTATATAAACACGTGGAACTTGCACAATGTAAACTAAAAGTTCATGTTGG
TTTCTTGAAAACAGTTATCGAGCTTGGTGCGGAGATTGATTTTGAACAAA
CTACGATAGgTGATGTTCGAATGATGATTCAGGACCATTTAGGAATTCCC
ATGAGTATCTTTTATTTGACGCAAATGAATGGTGATGCTCTAGAGCTTTA
TGATATCCACACTCTAAGATATTACCAAATCAAGGAGCAAGATGAGCTGA
TCCTCACTGTATGGAAGCACACGAAAGGCGTCATTGTCGGTGCTTTAAAC
GCCGACATCTCAAAGACAATGTCAAGTTTACCAAGTTTCCATGACAACCC
TGCGTTAAACAGATATTTACTGAGAACCATTTTGTTCATTGCGTCACATT
TCAATTTCACCAAACTGGCAGCTTTAGCTTTGCAACGAGGCATAAGATGC
GAAGAACCCGTAGGCGAACACTGTTCACGCCAATGGTGCTCCACCCAATC
CCACCCTGGCATCTTCAAAACGCCCATCCATCAAGCCGCCCAAATGGGCA
GTTTTCAATGTCTCAAAATGTTCGTACGTCACAGTCCGTCTTCTATGATC
GCTCGAGATGCTTATAAAAGAACACCAAGCAATTACGCGTCCAAATATAA
GAATTTCGAATGCTGGAAGTTACTTATCGCTTCTCAATTTGTACATTCGC
GTATCAACGGTTTTAGCTTAGCTTCACATGCTCGGATAATGAAATGGTGC
TCAGCAGCTAAAGAAAGAGTCAGTTATTTCAAAGGAGAAGACACAAAGCA
CTCCTTACTGCTACATTCAACCATAGGGAAAGAAAACAATACCTACCTAG
GGAATGAGATCACTGTAGCAGGATTTAACCATGGGAAATCAATCAAGAAA
TGCCCTTGCAACCATGAACCTTTAAAACCACTACCTAGGAGAAACACCAA
CCACAAGTTTGAAGTTAAATTCCCTGACGAGGACATTGAAATTCCCCATA
GGGACTCGATTCTTTCACgaagaaaatcaaaagccaTAAGACCtgattca
aaatcaaaacctaTTCTTAAAGACTCCCACACTAAATCGTTCAAACCGAC
AAACATCCAAAACAATCGAAAAGAAAGAGGGAAAAGTCTAGATTTGAATG
ACGCTAAACTTGATTTCCCCAAAACAGAACCGTCCACAAGAAAAGACAGC
CATAAAAAACTGCCTACGATACGAAAATATAAAACGTTACCCAATATAGT
AACTGAAACTAATAACTCAAAACATAAGTCAATAATCCGAgacaatgcag
tcaaaacagaGACAGGAGCGAAAATTGACAATGATGTGGAGCCAGATGAA
AACGAATCAGTTCTCAACACTTCTCTACCGCAATTACAAATGGCACACAT
GAAAGAGAGGCTGAGCAATCGAAGGAGTTCATCTTTATCGAATCTAGCTT
ttttacaacaagaacagcAAAATGTACATAATATCATTCTTGAAACTACG
GGAATGTCTTCTAAAGACTTGGCAAGCAAATGTTTACAACTTGGTGAAAG
TTTCACTGGACGATCTTGGATGAGACAATTCAGAATCGCCATGAATAGCA
GCACCAACAGGATTAAGAGAGGTCGACCTAAGACTAGTGTTTTACATTAA
atgaAACTCAACATCAGCTACAACAAAGTTCGTTACATTATTGAAGTATC
ACCAAACGAAAATGTTttacaaatcaaacaaaaggtTCTTCAGGCGTCAC
AACCGCCCATTCAGTGTAACGCCACACATGCAACAAAATCGGAAACCATG
TTATCTTTTAATGGTACCATCTTGGATGATGATATTGTTGTTAGTGACGT
TGGCTTGGTATCTGGAAACACGTTGCTATATAAACACGTGGAACTTGCAC
AATGTAAACTAAAAGTTCATGTTGGTTTCTTGAAAACAGTTATCGAGCTT
GGTGCGGAGATTGATTTTGAACAAACTACGATAGgTGATGTTCGAATGAT
GATTCAGGACCATTTAGGAATTCCCATGAGTATCTTTTATTTGACGCAAA
TGAATGGTGATGCTCTAGAGCTTTATGATATCCACACTCTAAGATATTAC
CAAATCAAGGAGCAAGATGAGCTGATCCTCACTGTATGGAAGCACACGAA
AGGCGTCATTGTCGGTGCTTTAAACGCCGACATCTCAAAGACAATGTCAA
GTTTACCAAGTTTCCATGACAACCCTGCGTTAAACAGATATTTACTGAGA
ACCATTTTGTTCATTGCGTCACATTTCAATTTCACCAAACTGGCAGCTTT
AGCTTTGCAACGAGGCATAAGATGCGAAGAACCCGTAGGCGAACACTGTT
CACGCCAATGGTGCTCCACCCAATCCCACCCTGGCATCTTCAAAACGCCC
ATCCATCAAGCCGCCCAAATGGGCAGTTTTCAATGTCTCAAAATGTTCGT
ACGTCACAGTCCGTCTTCTATGATCGCTCGAGATGCTTATAAAAGAACAC
CAAGCAATTACGCGTCCAAATATAAGAATTTCGAATGCTGGAAGTTACTT
ATCGCTTCTCAATTTGTACATTCGCGTATCAACGGTTTTAGCTTAGCTTC
ACATGCTCGGATAATGAAATGGTGCTCAGCAGCTAAAGAAAGAGTCAGTT
ATTTCAAAGGAGAAGACACAAAGCACTCCTTACTGCTACATTCAACCATA
GGGAAAGAAAACAATACCTACCTAGGGAATGAGATCACTGTAGCAGGATT
TAACCATGGGAAATCAATCAAGAAATGCCCTTGCAACCATGAACCTTTAA
AACCACTACCTAGGAGAAACACCAACCACAAGTTTGAAGTTAAATTCCCT
GACGAGGACATTGAAATTCCCCATAGGGACTCGATTCTTTCACgaagaaa
atcaaaagccaTAAGACCtgattcaaaatcaaaacctaTTCTTAAAGACT
CCCACACTAAATCGTTCAAACCGACAAACATCCAAAACAATCGAAAAGAA
AGAGGGAAAAGTCTAGATTTGAATGACGCTAAACTTGATTTCCCCAAAAC
AGAACCGTCCACAAGAAAAGACAGCCATAAAAAACTGCCTACGATACGAA
AATATAAAACGTTACCCAATATAGTAACTGAAACTAATAACTCAAAACAT
AAGTCAATAATCCGAgacaatgcagtcaaaacagaGACAGGAGCGAAAAT
TGACAATGATGTGGAGCCAGATGAAAACGAATCAGTTCTCAACACTTCTC
TACCGCAATTACAAATGGCACACATGAAAGAGAGGCTGAGCAATCGAAGG
AGTTCATCTTTATCGAATCTAGCTTttttacaacaagaacagcAAAATGT
ACATAATATCATTCTTGAAACTACGGGAATGTCTTCTAAAGACTTGGCAA
GCAAATGTTTACAACTTGGTGAAAGTTTCACTGGACGATCTTGGATGAGA
CAATTCAGAATCGCCATGAATAGCAGCACCAACAGGATTAAGAGAGGTCG
ACCTAAGACTAGTGTTTTACATTAAatgaAACTCAACATCAGCTACAACA
AAGTTCGTTACATTATTGAAGTATCACCAAACGAAAATGTTttacaaatc
aaacaaaaggtTCTTCAGGCGTCACAACCGCCCATTCAGTGTAACGCCAC
ACATGCAACAAAATCGGAAACCATGTTATCTTTTAATGGTACCATCTTGG
ATGATGATATTGTTGTTAGTGACGTTGGCTTGGTATCTGGAAACACGTTG
CTATATAAACACGTGGAACTTGCACAATGTAAACTAAAAGTTCATGTTGG
TTTCTTGAAAACAGTTATCGAGCTTGGTGCGGAGATTGATTTTGAACAAA
CTACGATAGgTGATGTTCGAATGATGATTCAGGACCATTTAGGAATTCCC
ATGAGTATCTTTTATTTGACGCAAATGAATGGTGATGCTCTAGAGCTTTA
TGATATCCACACTCTAAGATATTACCAAATCAAGGAGCAAGATGAGCTGA
TCCTCACTGTATGGAAGCACACGAAAGGCGTCATTGTCGGTGCTTTAAAC
GCCGACATCTCAAAGACAATGTCAAGTTTACCAAGTTTCCATGACAACCC
TGCGTTAAACAGATATTTACTGAGAACCATTTTGTTCATTGCGTCACATT
TCAATTTCACCAAACTGGCAGCTTTAGCTTTGCAACGAGGCATAAGATGC
GAAGAACCCGTAGGCGAACACTGTTCACGCCAATGGTGCTCCACCCAATC
CCACCCTGGCATCTTCAAAACGCCCATCCATCAAGCCGCCCAAATGGGCA
GTTTTCAATGTCTCAAAATGTTCGTACGTCACAGTCCGTCTTCTATGATC
GCTCGAGATGCTTATAAAAGAACACCAAGCAATTACGCGTCCAAATATAA
GAATTTCGAATGCTGGAAGTTACTTATCGCTTCTCAATTTGTACATTCGC
GTATCAACGGTTTTAGCTTAGCTTCACATGCTCGGATAATGAAATGGTGC
TCAGCAGCTAAAGAAAGAGTCAGTTATTTCAAAGGAGAAGACACAAAGCA
CTCCTTACTGCTACATTCAACCATAGGGAAAGAAAACAATACCTACCTAG
GGAATGAGATCACTGTAGCAGGATTTAACCATGGGAAATCAATCAAGAAA
TGCCCTTGCAACCATGAACCTTTAAAACCACTACCTAGGAGAAACACCAA
CCACAAGTTTGAAGTTAAATTCCCTGACGAGGACATTGAAATTCCCCATA
GGGACTCGATTCTTTCACgaagaaaatcaaaagccaTAAGACCtgattca
aaatcaaaacctaTTCTTAAAGACTCCCACACTAAATCGTTCAAACCGAC
AAACATCCAAAACAATCGAAAAGAAAGAGGGAAAAGTCTAGATTTGAATG
ACGCTAAACTTGATTTCCCCAAAACAGAACCGTCCACAAGAAAAGACAGC
CATAAAAAACTGCCTACGATACGAAAATATAAAACGTTACCCAATATAGT
AACTGAAACTAATAACTCAAAACATAAGTCAATAATCCGAgacaatgcag
tcaaaacagaGACAGGAGCGAAAATTGACAATGATGTGGAGCCAGATGAA
AACGAATCAGTTCTCAACACTTCTCTACCGCAATTACAAATGGCACACAT
GAAAGAGAGGCTGAGCAATCGAAGGAGTTCATCTTTATCGAATCTAGCTT
ttttacaacaagaacagcAAAATGTACATAATATCATTCTTGAAACTACG
GGAATGTCTTCTAAAGACTTGGCAAGCAAATGTTTACAACTTGGTGAAAG
TTTCACTGGACGATCTTGGATGAGACAATTCAGAATCGCCATGAATAGCA
GCACCAACAGGATTAAGAGAGGTCGACCTAAGACTAGTGTTTTACATTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000099_pilon | genome | sc0000099_pilon:962305..965573 + |
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