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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000099_pilon:947205..954376+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12870.1.p1 ID=MSTRG.12870.1.p1|Name=MSTRG.12870.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7172bp|location=Sequence derived from alignment at sc0000099_pilon:947205..954376+ (Clytia hemisphaerica_ch_hm2_pilon)
CTCATATTTAATCACTTCTTGATTGTCGACCAATAAGAAGATGCGTTCTA
AAATAATGTGGATTAAGCAGCAATTAATGGAAAAGAATACACTGTTACAG
GAAGTTATATAAGGTGAATACTGAAAtgtttttcttcgttttctcaTGTT
ATTATGTCATCATTCACTTTGCAACGTTGACATAGTATTGATTTGATTGT
AATGATGTGTAAAGCTAAGCTAAGATTCGTGTGTTACTTTATGGCGTTTG
TAATGTTAAACtttgtggtgtttttggtttcggttttggttttggttttt
tgtctttttattccTCATTTGGATAAGCTATTTGTTAAGGTTGCCAAACA
ATCAGTTTATCAAATCTTTAGGctgataaacaaaaattaccagAAGAAAA
GTAAACGAAATACTTATATACTGAAAGTATTTTAAGTATCAATCGACTTT
AACgtatttattttgatattataaACGTTACGGGAATTCTTTGATTCAGT
GACACAGTCAGATGCGGCCACCATTTAATTGGGATAGTTTAGGTCAAACT
ACAACCCACTCCACTTTTTCACTATTCTGATAGCAGTCATCACGATAGGT
ATCACATCCTTCAGTAAAACCAGAAAATGGTCCAAGTGGATTTGCGTACG
AGATTGAGTCTAGTCAAAAATCCTCTCACAGTTGTCCCTAGATATACAGC
ATTTTTCCATCAGCTCATTTTTAAACTTGCAATTCCAGTAGGGGAAACCA
TGCTCTGTTTGTTTATACGTTTAAAATAAAAAGCTAGAAATGACGTATGT
AGGGTAGGAATCTTTTGGAAAGGATCAATCTTCACTCGTACATATGGGTT
CATACGGCTTTAACCACAAACAAATAAAGAATTTTAGCGCTAATAAGAAT
TTGAGACGCGGAGGAAGTTATTGTTAACGTTAACGAATGCCATCAAAATT
GGTGCTTCCCTACAGCGGTTTTTTGTAATTGTCGGTAAATAAGACGTGAA
AATGCAGATGAAAAAACGCGTGGTTAAATGGTTTCAAAAAGCAAATAATG
TACCCCATCTCATCATCACATTAAATCACAAATGCTTGTAGACTGGCCAC
ATATAAAAAATCATAAGTGATTCCACTATACATAATAGCGAGTGGTGGAT
AATCAAATGGTTGAAATCTAAGATACTGTAGGGTTTTTCAACAAAATGGT
CGATGGCAGAATTGGTGATCGTTGGCTccaatcattttttcatttttgct
gaaaaagaaCAAGCCTGAGATGAACAAGTCGTCGCGCGGCATCAACTATG
ACTTAGGTaagtttttccattttctaATTTCACCCAAAAGCATGTTCTCC
Attcttttttatcatatttcattacttacagtaatatatttcccaggtct
atcgacctttatgaaataatcatacttaacattttacaatttatggaGAT
CTTTTTCCCATTCTGTGAGCAATTTTAatgccccccagcggtttgcatgA
TTGAATATTCATATAAagtacattcttataaaagagaCCGTGTACTAAAc
gagaattttctttctgtaaagttcttataaaaattatgAGAATTGAGACT
ATTTTCGTTTGACCACGAAAATGCAATTATTCTAATCACAACTTTTGGCA
ATAAATCGATTATGAGAACGCGTAACCTTGACTTTTTTCATAAAGAGGTT
GACATAAATTAAGAAATTTAAGACTTTAGAGGGTAGAAAAGTGCAGAAAC
AGGACTTGTAGACCCTAGGCCCGAGGCCCAATAAAGGCACCGTTAGAGTG
GGCGCACCGAGCTTACACCCTCTTTTTCCAGGTAACTCCCGCTTCATCCC
TTGTATGTGTTTCTTACAATAAAATTAGTTCCtatgaaaaacttttgaat
acCACATTTAGAAGTCGTTACCATTTCTCTTTGTGTGCTTTCTCTTATCA
AACATCTACATAAATGCAATtaaataattcgaaaaaaaatatttatccat
AATGGTAGATAAAGTAGTGAGGTTCTCTTAAAATACGCGTGTACTAATAA
AGGTACAAGCTCCCTTGAGGGAAGTCTTATATTGTGAAAAGGAAAAGCAG
TTCTTTTattatgatttaaaaaatctttgatttgGAGCTTTTGTTATTTA
GGATAGATGTGCTATGCTATTACTAAGAAAacgttaaaatttaaaattga
aaatattatttgtatttatcatttttttcaaaacatgtgAATTTTTGAGA
AGTGAAGAGCAAAGAGGAAGGATTTCAACGTGAAGAAGAAATTTGTGTAG
TGAATCCGGTATAAGTAATGTTATAGAAACGGGAGATTTGTTCTGAGGGA
GTGTTTTGAATTTGTAAGCTACGATAAAAATGCGTTCGATCGAGTTAGAT
ACGAAGAGCCTCGAGTTATAGAATGATGACCCGAAATCAAGTGAGCTGGC
ACCAACACCAAACCATAGTCAATTGGAGAGTTGTATAGCATCAGGTTCAA
AATTTGTGATGATATATTTTACAGCCATTCCATTTGTATGGTGATTCGGA
GGATAAGTATAGAGTCAAAGAGATAAAACAGCCCTATCTCGACTCGAGGC
ACAGTCCTGTCTCACACCCCAGCGAATCTTTTTTCTCGCAGTGCGGATGA
AAGGAGGTTGATAGCTTCGAAGtttttttATTCCTAgctaaaaaaatcca
gtgggaatggCTTAATTCTTCCCGTCAGGAACACAACTTTGTCCGAATTT
TCCGGTGGGGCAGGGATTCTCCCGAGTCTATGACAAAAGGGTATCGAGAC
GCATTGAAAAGTTTTGGTCAGATGTTCCTATGGTTAAGGAGTTTCACCCG
GTCTACGATACAGGGGTATATTATAGTTAGAGTTGATAAGGAAATTCATT
CAACACAGCAAATGATAACAGAGACTTGATAAGTGACAGATAGAATCTTT
TTAATGATATAATTCTTTGATATCAGAATTTGCAGCTTGTAACTATTAGA
TTAGATTAGATAATAAGATTCTACCGGATAGTAAGACAGTGATGTTAGTA
AGTTTTAATGAAAATTGTGATGTTTTTGTGCCAATAGACTAATGTATGAT
ATAATATGTAATGGTTGTAATGTAGGTTTAATATTAGCTTGCTAAATTAG
TAGATGACTGTTATAGATCATTGAAATGATTGCCACGGTTAGAGCAAATC
CAAGTTAGTTATTACCAGGGCCAAATGTAgctaaaagtttttaaaattca
aagccAGGGAGCAGTGGGCTTACCAAATGACCCCTACAGTGCAGAAAAAt
gtcggtgaaattcatacccttacagtgcatttttctcaaattatcaaaca
aataaaaattttcgggcAACAATGCGTAATTTTTCCTAGACTTGTAATTA
TTTCTCAGTCAATTTGACTGACTGCCATCTTCTTCCCGAGAATTCATAGT
AAAGAGGGTCGACTTCCATAAACATAAGTGATAATATCGAGTCCCTTTAG
AATCTCCCTGgttaataattttataattttaccaaaattaattcaaaatg
ttCATATATTTCTCGTCTAGAGACGTCACTAACCTACGATGTATCCAGGA
AAATATTTACTGATAAGCTTAGTATTGACCCTGGAGTCTGTCCTGGTCAT
GGCGAAAAGTTTGACGATGCAGTTGAATGGATATGATGACGATTGTGTTT
ACTTATCTAAAGAGAAAGACGAAAAGCTTGATTATATGGTAAGTTTACCT
AAAggtcagtagcgtggtgggtcaaggcaaactggggaggcaattttaga
agatttgggttttggcgccccctatgaaaagtaaatattttttaaagaat
aacgcgagcgaagcgagcacgaaAATCTTTGggtattttcttctttttgg
ctgaaaactgcCATATTTAAGGTGTAAAAGGGACGCCGAAATTATAggct
agcgaaaaaagtttctgcgattcagactaccgAAATTAGTAATTTAAAGC
GTCCTTTTTGCACCCTTTATAATTCGGCGCCCCTTTGAAAAACCACCCTG
caccctgccaccacgctactgccaaaggtttcttattttgatagaacttt
ggagattttgaaattttccataatAACAGGTGTTTTACAAAAGTATGATA
GGTAGGATTCTGGACTCTCTTTTCATTGGAAGAATAAAGTGAGAAATGTT
CCCTTTGAAAGAAATACCCGACtgagattttggatgttcttaaatgaaaa
aacaacttgTATCGACATTTATATTCTTCATCTTGCTTCCTTCTCACTTG
GTCACTAAGGGTGTATAATACAAAAAGGATTGGGctgaaaaattataatt
tcgGATATTAAGAACGTCAAAAGCCTTTGgacgttttaattttttaagct
TCTAAGgattctattgtttaaacagTTTATAAGTAGCTGACTCCCTAACA
AACTCATTCACAGTTTAAAGTCTTCAAAGCTTTAAAATCTCTtagaatgt
tttaaaaattattctagCTTCGGAGTCTTATGTTATAAGAAACTTTGTTT
TGAGAAACCTGTTCTTGAATTTCAGTTGATATCAGGAGGTGCGAAAGTGG
ATTTTACCATGTTCGAACCGAACGAAAACAGTCCAAATGTACAACGACAT
GAAGTTACCGAGCATGAACAAATTGGATTGCTGCTTAATAAGACAGGTAG
ATGCTCTTTTTATTACCAGTTTGATCTCAAATTGTTCTCATCTTGTTCTT
ATCTTAAAGGCAAAATTGAGATATTAAAAGCGCATTTTCGTTTTACTGTC
TAAATCTTAACTTGCTTGAAATTCAACCATTCCAGGCTCAAATGttttct
taaattattcttatttttcggtataaaattgttcttataaaataaaaaag
gcgaTTAAAAATCTGAAGTGGATGGAAGGTAATGGCAATTATCATTTGTC
TGAAATTTAAACGGTGAATCTTTGTTTGATGGTTTTTGCAACTATAGCAC
CTCATACCCAAATGTAGCCTGTACCAGACTCTTCGTCGCTGACTGAAAAT
ATAACCTACggcaagtttttttcaaaatatagaaaACGCCCGTGGCGGCA
GGGTGATAAGGCTAACCCAAATGAAGTTTTCTtagacttttcttaaattt
caggCGATTACAAATTCTGTTTCGCTAACGCCTACCAGAGTCACCCCATC
AATGTGCTGTTTGAGTATGATATGTTTGAAGATATAGAAGCCGCACCCAA
TGGAAACATGCAGAAAGAGAAAGACATTTTCGTAAAGAAGGCAAAAGACG
CCGTTAGAGAAATGTTCGACCAGCAAGGTACTGTAAAACCCTTATCTAGC
AACACTGATCTTTTGTTATGCAAGGGCTATAAAATCAATTCTTAAATTAA
ACTCAAACCCACTCTCCTAGTTCGCTTTTAAGATTCTCAAAGCGTTCACA
ATTTTGTATTGCccatcagtaaaataaaaaaaagtgatgTATATGGCTCT
GGGGTCTATTACGAAATAGGCTTTTATGTCAGACGGGCAAATCGATGACT
TTGGACCCCTGTGAAAATTGACTCTGTTGATTCTAAAACATATAAAGCAG
GGAAAAGTTTCGCCATAAgctatattttaagaaaattgataagTGCTTAG
GGGATATGCAAAGAGCAAGaaaaaaaaTGGTTTCATATACAAATTGAAAT
TTCGTCGAGCAGTGAGACAGGACCGTCTCTAAATAAACTTGAATTACTTT
GATTGGATATAATTtagcggggattaaatttcacgattttAGTGTCATCC
AAGAAAATAAGTCCACGTGGAATATTTATCAGCCATCACCagtgggcttt
tccagaaatagtccgtgttCCCCCTGTTGAGGAATATCCAGgaggttaac
gatttttgttcaaaagtggatatccaggaggTTAAATATcgacaagggag
cggatatccagggggtaagcatctttataaaagAGGATATCTAGGgagtt
gagcatatttttaagagtggatatccagggggttttTACGAATAAAGCGG
GATATCCAAGGGGTGcgatactttgaaaaatcaatatcctcaacagtggg
gacaaattttttttctggaaaagcccatctTGTTCGGTTcgcaaaacttt
tcatttcattccATTGGCATAGGTTACCATTTGACAGACGATGCGCACAG
ACGTTCCTTCATGAAAGCAGTTGTAGAACATCAAAAAGAAGCGCTCTACC
ACGGTGAAGGGAAAGGCGCTGACGATCGACTGAAGGTAAATACACGATCC
TTTCTCGAAGTTTACTGGATATGTTTTACTTTTCCAGTGCgcacagtttt
tgaaaaatatgaacactttttgaaaaatatgaacattttcaaaatttttg
aaatccaataaaatccaataaaactaaaaCTGACATAAAAGCATGTAacc
tgaaagttttttttgtaattgtgCATAGTCATTCATTTTTGTTCCATTTT
CGAAGgcaaaaactaaaattgtacgTATTTTAATTTCTGTCCTTTCAAGC
AAAAAGAGGTCTGTATGTTTACCCCAAAAAactatttattttcttaacaa
TCCAACTTAGGGTACAATTACAATGATTGGTATCTACAtggatgaaatgg
aaaaatcaTTGAGCAGACATGGAAAACGCATCGGGCGCCATCACTTCTTA
CAGATGATCAACCATGACCGAGTAATGCAATATTCTATCCTAATCTCCTT
AGCTATGGTTGTCAGTACATGTGTCCAATTGGTTGTGGTCAAAGGATTCT
TTAATGGCAAAATGTCTTTGAATGtcttttcttataaatagcaaATTTTA
TGATATATAGGTTTAAGCGTTTATAGGAGTGGCttctttgattaaaaaaa
agaattttcaaaccaACATTCGTACGCGTATACGAGTGGTAGCCACCGTG
CATCATTGTTGGTGGACCTGTTTTAGTTTGCGATCTACGTTGAGGTCTTT
ATTGGTTTGGAATTGGGCATTTCAAGAGCCTGGACTTGAATTTTTGTAGC
TTTTGTATAATATTTCTTATAGATTATCTTATAGGGGGTTACAAAGAAAA
TTTTTAAATTACAATAGTATCATAGAATAAATTTAGGGAAGAAAGAGAAA
AGATTATTAGAATATATGATTG Coding sequence (CDS) from alignment at sc0000099_pilon:947205..954376+ >MSTRG.12870.1.p1 ID=MSTRG.12870.1.p1|Name=MSTRG.12870.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3945bp|location=Sequence derived from alignment at sc0000099_pilon:947205..954376+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATCCAGGAAAATATTTACTGATAAGCTTAGTATTGACCCTGGAGTC
TGTCCTGGTCATGGCGAAAAGTTTGACGATGCAGTTGAATGGATATGATG
ACGATTGTGTTTACTTATCTAAAGAGAAAGACGAAAAGCTTGATTATATG
TTGATATCAGGAGGTGCGAAAGTGGATTTTACCATGTTCGAACCGAACGA
AAACAGTCCAAATGTACAACGACATGAAGTTACCGAGCATGAACAAATTG
GATTGCTGCTTAATAAGACAGgCGATTACAAATTCTGTTTCGCTAACGCC
TACCAGAGTCACCCCATCAATGTGCTGTTTGAGTATGATATGTTTGAAGA
TATAGAAGCCGCACCCAATGGAAACATGCAGAAAGAGAAAGACATTTTCG
TAAAGAAGGCAAAAGACGCCGTTAGAGAAATGTTCGACCAGCAAGGTTAC
CATTTGACAGACGATGCGCACAGACGTTCCTTCATGAAAGCAGTTGTAGA
ACATCAAAAAGAAGCGCTCTACCACGGTGAAGGGAAAGGCGCTGACGATC
GACTGAAGGGTACAATTACAATGATTGGTATCTACAtggatgaaatggaa
aaatcaTTGAGCAGACATGGAAAACGCATCGGGCGCCATCACTTCTTACA
GATGATCAACCATGACCGAGTAATGCAATATTCTATCCTAATCTCCTTAG
CTATGGTTGTCAGTACATGTGTCCAATTGGTTGTGGTCAAAGGATTCTTT
AATGGCAAAATGTCTTTGAATGtcttttcttataaatagATGTATCCAGG
AAAATATTTACTGATAAGCTTAGTATTGACCCTGGAGTCTGTCCTGGTCA
TGGCGAAAAGTTTGACGATGCAGTTGAATGGATATGATGACGATTGTGTT
TACTTATCTAAAGAGAAAGACGAAAAGCTTGATTATATGTTGATATCAGG
AGGTGCGAAAGTGGATTTTACCATGTTCGAACCGAACGAAAACAGTCCAA
ATGTACAACGACATGAAGTTACCGAGCATGAACAAATTGGATTGCTGCTT
AATAAGACAGgCGATTACAAATTCTGTTTCGCTAACGCCTACCAGAGTCA
CCCCATCAATGTGCTGTTTGAGTATGATATGTTTGAAGATATAGAAGCCG
CACCCAATGGAAACATGCAGAAAGAGAAAGACATTTTCGTAAAGAAGGCA
AAAGACGCCGTTAGAGAAATGTTCGACCAGCAAGGTTACCATTTGACAGA
CGATGCGCACAGACGTTCCTTCATGAAAGCAGTTGTAGAACATCAAAAAG
AAGCGCTCTACCACGGTGAAGGGAAAGGCGCTGACGATCGACTGAAGGGT
ACAATTACAATGATTGGTATCTACAtggatgaaatggaaaaatcaTTGAG
CAGACATGGAAAACGCATCGGGCGCCATCACTTCTTACAGATGATCAACC
ATGACCGAGTAATGCAATATTCTATCCTAATCTCCTTAGCTATGGTTGTC
AGTACATGTGTCCAATTGGTTGTGGTCAAAGGATTCTTTAATGGCAAAAT
GTCTTTGAATGtcttttcttataaatagATGTATCCAGGAAAATATTTAC
TGATAAGCTTAGTATTGACCCTGGAGTCTGTCCTGGTCATGGCGAAAAGT
TTGACGATGCAGTTGAATGGATATGATGACGATTGTGTTTACTTATCTAA
AGAGAAAGACGAAAAGCTTGATTATATGTTGATATCAGGAGGTGCGAAAG
TGGATTTTACCATGTTCGAACCGAACGAAAACAGTCCAAATGTACAACGA
CATGAAGTTACCGAGCATGAACAAATTGGATTGCTGCTTAATAAGACAGg
CGATTACAAATTCTGTTTCGCTAACGCCTACCAGAGTCACCCCATCAATG
TGCTGTTTGAGTATGATATGTTTGAAGATATAGAAGCCGCACCCAATGGA
AACATGCAGAAAGAGAAAGACATTTTCGTAAAGAAGGCAAAAGACGCCGT
TAGAGAAATGTTCGACCAGCAAGGTTACCATTTGACAGACGATGCGCACA
GACGTTCCTTCATGAAAGCAGTTGTAGAACATCAAAAAGAAGCGCTCTAC
CACGGTGAAGGGAAAGGCGCTGACGATCGACTGAAGGGTACAATTACAAT
GATTGGTATCTACAtggatgaaatggaaaaatcaTTGAGCAGACATGGAA
AACGCATCGGGCGCCATCACTTCTTACAGATGATCAACCATGACCGAGTA
ATGCAATATTCTATCCTAATCTCCTTAGCTATGGTTGTCAGTACATGTGT
CCAATTGGTTGTGGTCAAAGGATTCTTTAATGGCAAAATGTCTTTGAATG
tcttttcttataaatagATGTATCCAGGAAAATATTTACTGATAAGCTTA
GTATTGACCCTGGAGTCTGTCCTGGTCATGGCGAAAAGTTTGACGATGCA
GTTGAATGGATATGATGACGATTGTGTTTACTTATCTAAAGAGAAAGACG
AAAAGCTTGATTATATGTTGATATCAGGAGGTGCGAAAGTGGATTTTACC
ATGTTCGAACCGAACGAAAACAGTCCAAATGTACAACGACATGAAGTTAC
CGAGCATGAACAAATTGGATTGCTGCTTAATAAGACAGgCGATTACAAAT
TCTGTTTCGCTAACGCCTACCAGAGTCACCCCATCAATGTGCTGTTTGAG
TATGATATGTTTGAAGATATAGAAGCCGCACCCAATGGAAACATGCAGAA
AGAGAAAGACATTTTCGTAAAGAAGGCAAAAGACGCCGTTAGAGAAATGT
TCGACCAGCAAGGTTACCATTTGACAGACGATGCGCACAGACGTTCCTTC
ATGAAAGCAGTTGTAGAACATCAAAAAGAAGCGCTCTACCACGGTGAAGG
GAAAGGCGCTGACGATCGACTGAAGGGTACAATTACAATGATTGGTATCT
ACAtggatgaaatggaaaaatcaTTGAGCAGACATGGAAAACGCATCGGG
CGCCATCACTTCTTACAGATGATCAACCATGACCGAGTAATGCAATATTC
TATCCTAATCTCCTTAGCTATGGTTGTCAGTACATGTGTCCAATTGGTTG
TGGTCAAAGGATTCTTTAATGGCAAAATGTCTTTGAATGtcttttcttat
aaatagATGTATCCAGGAAAATATTTACTGATAAGCTTAGTATTGACCCT
GGAGTCTGTCCTGGTCATGGCGAAAAGTTTGACGATGCAGTTGAATGGAT
ATGATGACGATTGTGTTTACTTATCTAAAGAGAAAGACGAAAAGCTTGAT
TATATGTTGATATCAGGAGGTGCGAAAGTGGATTTTACCATGTTCGAACC
GAACGAAAACAGTCCAAATGTACAACGACATGAAGTTACCGAGCATGAAC
AAATTGGATTGCTGCTTAATAAGACAGgCGATTACAAATTCTGTTTCGCT
AACGCCTACCAGAGTCACCCCATCAATGTGCTGTTTGAGTATGATATGTT
TGAAGATATAGAAGCCGCACCCAATGGAAACATGCAGAAAGAGAAAGACA
TTTTCGTAAAGAAGGCAAAAGACGCCGTTAGAGAAATGTTCGACCAGCAA
GGTTACCATTTGACAGACGATGCGCACAGACGTTCCTTCATGAAAGCAGT
TGTAGAACATCAAAAAGAAGCGCTCTACCACGGTGAAGGGAAAGGCGCTG
ACGATCGACTGAAGGGTACAATTACAATGATTGGTATCTACAtggatgaa
atggaaaaatcaTTGAGCAGACATGGAAAACGCATCGGGCGCCATCACTT
CTTACAGATGATCAACCATGACCGAGTAATGCAATATTCTATCCTAATCT
CCTTAGCTATGGTTGTCAGTACATGTGTCCAATTGGTTGTGGTCAAAGGA
TTCTTTAATGGCAAAATGTCTTTGAATGtcttttcttataaatag
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000099_pilon | genome | sc0000099_pilon:947205..954376 + |
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