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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000099_pilon:697991..700843+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12858.2.p1 ID=MSTRG.12858.2.p1|Name=MSTRG.12858.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2853bp|location=Sequence derived from alignment at sc0000099_pilon:697991..700843+ (Clytia hemisphaerica_ch_hm2_pilon)
TATATAATTACCATTATTGCATAGGAGTGTGTTATATTTATCCATTAGCT
GTATTACTAAAATAGTACTCATTGAATGAAGTCACTCTCGTGTCTGTTCT
TAACAAGATGAAGTTGATTTTTATACTTGGAGTATGTCTTCTCATGCAAG
GTAAGTGAGCTTTGAGCACATAGAGTTTTGCTTTGTGGTGGGCTAGTCGA
AACTGTGGAGACAAGTTAAAAAGGTAGTATTAGGCACTCTGTCTCTAGGG
TTTGTTCAAtagtaataatgataataaaagCTAGCTGTTGAGTGAAAAAA
GCTGCtcaatttacttttaaaatagtaACGATGTACTGGAAGAAAAATGG
TTTTCTTTTTCTGGGCCGGGAAGTTTggttgttttcaaaattaatcaaaa
tcttATACTTTCCTTTCTCTACAGGTTGCCAACTGTCGAAAGCAACAGAA
TACGCTGCTTATGAAAATGAGGATCTGGATCACAATGGCATGACAAGTCA
CCAAAACGAGAACGCAATGGAACACATAGATGATGCAATTGAAaacaatg
aagaagaagatgatgatgattttgaagATCAAAATAATGGACCAGGTTTG
TAAAATAATCCATCATTTATGTAATCATTTTATTAGCCAGTAAAGGAACT
TAAAATTTCGCGAACTTTTTCTGTAACCTGGTTTTTAGGGAAATATATAA
TCCCGCTCATTTTAAAGACGAAAGCTATTTATCAATATCGAATTTTCAAT
AgatttgtttcttttaaaataaactCTTGTGATCGTCCTCGAAAGTTTAT
TATTTTGGGaagattaaagattttttcaataatcaataatcaaaatatta
aatattaaaataattcaaaaaaaaattgtacctgTTTGACGCTGAGTGAT
TGAGTGAGCCTTTTTACGTTTTAGTCGAAGACAAAGCAGACATGGAAAAA
ACGGgagaaattgatgaaaatgatgatgaagaagaagaagaagaatatcC
AAGAGATGCAAACCCTTGGGAAAGTAGAAGACGTTCTTTCAGGTACGCtt
tattgaaaaatcaaaatataatagccgcattctttttcaccgtccaacac
tTTATTGAAAGATAGATAGAGTCAATATTTTAGGTTGATTGTTCAGTAAT
CTAGCTAATTTTCCAGTAATCTAGGTAGCTTTCTATTTCCACGTAGTCGA
CggcgtttttttttgtttctgttcCGTCTGAATAAGTTGTCTTTCATGCT
AGACTACAATCCACACATTAAAAGTTGATCACAAACTTTCTAGTAACTGG
AGGAGAAGAAGATACCACAGTTTGAGACGTCGATACCACAATTTGAGACG
TCGATCGAAAAGCAACTGGCGAAGGCGAAGTATCTCAACATCTCCATCGC
GAAgacggacattacgaagacggacattacgaagacggacattacgaaga
cggacattatgaagacgGTGGAGACAAACTGCAAAGAAAATTGGAGCATG
AGTTATAGTTGCTGCAGGTATAATAGTTAAGAATTGGGGAATGGGGAAAT
TTACAGCTTAGCTAGAATCTGACATTAAAGGTTCGATTTTGAAAAGgttc
tcgggtaagttatggcatgtcttaaaattaccataatttttaaatagCAT
TAGCCGACAGATAacaaccaaacaaatgactgaacatgaagggtactgtg
atgtagtttctaacctgatgtgtaacctaattgttttttcgccaGTTTTC
Acgaaaaactgcaaaaactgattatgacgtcataataactaaaaattgaa
tttctcaagggtTATTtatccaatagaccttttcataaattacgtcacga
acatcacttgcctcgttttcaaacaatcactatggtgattatgtcccttg
agacattaaatgatttttttatgaaaagaaagtagtttaaataaaatccg
ctgggagttaatcaccatggcaataatttcaaaacgaggcaagtgacgta
atttatgaaaaggtctatcgtcTTCAAACTTTGACtaaagatgtatctca
ctaaagtcgatcatttgaaaaagatttttttttgaaattctgattacgtc
agcaaaaaataaaatttttcccttttttcctaATTTCTGCTGATGTCTTA
CTTTACGtcagacatgccataacttacctgagtttGGAATGCTTTCTTCT
TAGCTTCGTCAAATTGACAAAATGCCAATGTGCTTCACAACAACGATAAA
TTCTTTATCAAATGCCTGACATGACTTTTTATTAGAAACTGGTTCAAAAA
GTTGCACCCTAGTGCGAGTTCTTGGTCCCTGGAAGATCGAATCAGTAGTA
GTTAAAACGAGAAAAAGTTGGATTCAATAGATTTATAGCCTTACCAAATC
TGCTTCGTAGAGGGACACACGGCAagctgaaaatataaaaatgccTGTGG
GTGGGGTGGTACAGGTTAATAGATTTAAAaccttactttttatttcattt
taggcGGCATCAAAAAGATTCGAAACAAGATCATCAAAGAATTAATAAAA
CCCAAATGTGCAGGATGTGCAGGGATTTGTGAGAAACCGGCGCCTTCAGG
TTGTCGGTGTGTCCAAGATCAGGCGTGCATCAAAAGGATGTATGGATGAC
TTTTTATCAGTAAAGAATAGCTAACTGGTAgcaaataattcttttttaat
tcagAGAATTTTGTATCACCTtttattttatatgaaaaaataaaatttaa
aggcaaaaataatgtaacattgtaaaatTCTTCCCTGAGGGAGGTTCTAG
GTTTGCGACGAGATTGAGGCTGCCCggctcaaaagttcaaaaatcgacCT
GGA Coding sequence (CDS) from alignment at sc0000099_pilon:697991..700843+ >MSTRG.12858.2.p1 ID=MSTRG.12858.2.p1|Name=MSTRG.12858.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1896bp|location=Sequence derived from alignment at sc0000099_pilon:697991..700843+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGTTGATTTTTATACTTGGAGTATGTCTTCTCATGCAAGGTTGCCA
ACTGTCGAAAGCAACAGAATACGCTGCTTATGAAAATGAGGATCTGGATC
ACAATGGCATGACAAGTCACCAAAACGAGAACGCAATGGAACACATAGAT
GATGCAATTGAAaacaatgaagaagaagatgatgatgattttgaagATCA
AAATAATGGACCAGTCGAAGACAAAGCAGACATGGAAAAAACGGgagaaa
ttgatgaaaatgatgatgaagaagaagaagaagaatatcCAAGAGATGCA
AACCCTTGGGAAAGTAGAAGACGTTCTTTCAGTTTGAGACGTCGATACCA
CAATTTGAGACGTCGATCGAAAAGCAACTGGCGAAGGCGAAGTATCTCAA
CATCTCCATCGCGAAgacggacattacgaagacggacattacgaagacgg
acattacgaagacggacattatgaATGAAGTTGATTTTTATACTTGGAGT
ATGTCTTCTCATGCAAGGTTGCCAACTGTCGAAAGCAACAGAATACGCTG
CTTATGAAAATGAGGATCTGGATCACAATGGCATGACAAGTCACCAAAAC
GAGAACGCAATGGAACACATAGATGATGCAATTGAAaacaatgaagaaga
agatgatgatgattttgaagATCAAAATAATGGACCAGTCGAAGACAAAG
CAGACATGGAAAAAACGGgagaaattgatgaaaatgatgatgaagaagaa
gaagaagaatatcCAAGAGATGCAAACCCTTGGGAAAGTAGAAGACGTTC
TTTCAGTTTGAGACGTCGATACCACAATTTGAGACGTCGATCGAAAAGCA
ACTGGCGAAGGCGAAGTATCTCAACATCTCCATCGCGAAgacggacatta
cgaagacggacattacgaagacggacattacgaagacggacattatgaAT
GAAGTTGATTTTTATACTTGGAGTATGTCTTCTCATGCAAGGTTGCCAAC
TGTCGAAAGCAACAGAATACGCTGCTTATGAAAATGAGGATCTGGATCAC
AATGGCATGACAAGTCACCAAAACGAGAACGCAATGGAACACATAGATGA
TGCAATTGAAaacaatgaagaagaagatgatgatgattttgaagATCAAA
ATAATGGACCAGTCGAAGACAAAGCAGACATGGAAAAAACGGgagaaatt
gatgaaaatgatgatgaagaagaagaagaagaatatcCAAGAGATGCAAA
CCCTTGGGAAAGTAGAAGACGTTCTTTCAGTTTGAGACGTCGATACCACA
ATTTGAGACGTCGATCGAAAAGCAACTGGCGAAGGCGAAGTATCTCAACA
TCTCCATCGCGAAgacggacattacgaagacggacattacgaagacggac
attacgaagacggacattatgaATGAAGTTGATTTTTATACTTGGAGTAT
GTCTTCTCATGCAAGGTTGCCAACTGTCGAAAGCAACAGAATACGCTGCT
TATGAAAATGAGGATCTGGATCACAATGGCATGACAAGTCACCAAAACGA
GAACGCAATGGAACACATAGATGATGCAATTGAAaacaatgaagaagaag
atgatgatgattttgaagATCAAAATAATGGACCAGTCGAAGACAAAGCA
GACATGGAAAAAACGGgagaaattgatgaaaatgatgatgaagaagaaga
agaagaatatcCAAGAGATGCAAACCCTTGGGAAAGTAGAAGACGTTCTT
TCAGTTTGAGACGTCGATACCACAATTTGAGACGTCGATCGAAAAGCAAC
TGGCGAAGGCGAAGTATCTCAACATCTCCATCGCGAAgacggacattacg
aagacggacattacgaagacggacattacgaagacggacattatga
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000099_pilon | genome | sc0000099_pilon:697991..700843 + |
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