MSTRG.12856.1.p1 (mRNA) -

Overview
NameMSTRG.12856.1.p1
Unique NameMSTRG.12856.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000099_pilon:682447..683826+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.12856.1.p1 ID=MSTRG.12856.1.p1|Name=MSTRG.12856.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1380bp|location=Sequence derived from alignment at sc0000099_pilon:682447..683826+ (Clytia hemisphaerica_ch_hm2_pilon)
AAGAAACATGGCTGAAGTAAAATCTGATgaaactttgacaaaaaaaacgt aAGTTTTAAGCTGAATCCATTGGagtttgataattttcatttagaaaata taattgCTTGAAAAACTAAccaattattttatatttttgggcataaattt tccaaatttcaaaccaaaacaaacataaATGCCTTTTGCCTTGATTTCTC TTGGATTTGGAAACAAATTGGATATCACTTCTTCGATTTAAATGTGCAAC TTTCTGGCTATTCATATACAATCTGAAGAAGGTAAAGTGACACAAATTAT TGTATATGTAAGCATTAATCAGGCATATGTTTTCACATTTTTAGCATCAT GAAATGGGATGATAAGCACGATGTTTTGTTGGGGCGTGAGCTCTTATTCA TGAAGCCATATAATTTCAAACCTGGTACCAGAGATAGCGGTTCAGCGTGG ACAGCAGTTGCAGAAGACTTAAACAAGGTCACTGAGGTCAAGTTCGATGT GACACAGAAGTCAGTTCGAGACAGAACGAAGATCGCAATAAACAACCACA AACGAAAAATGCGTCAACAAATAGCTGAATCCGGGTCAGTGGAAAATCCA ACGGAAATGGACCAGGTATGGGAGGAGATAAGCTCTGAAATGCAAGAAGC ATCTGAGAAACATGAAGCCACATCCTCTAACAAGAAGAAAGAGGAAGACA AATATAAGGCTGATGCTGAAGCAATTCGTGCTACAGCCATGGAAACACAT GCAGAAACAAGGAAGAGGAAAGCAGCTGACGATGGCAGCCCATCATCATC TAAAGGTAAACGCAATACTGGTACTGAGACATTTTCGTTTCTGATGGCAA AACTTGAAACCGATAAGGAAACAAAGGACAAGGAACtagaaatgaagaaa atgacTATGGAACGTGaacaacagcaattacaacttttaattgaacaaca gaaacaaatacaggcaaatcaacaacaacaaaaccaaatttctttacaac TTATTCAAGCTTTATCACAAATGAACAATAAAAACCCTTCAAATAAATGA GTTGGTCCTTCTAATGACTTTACGTTGAATTTGGTGGTTCCTTTTTATGA CTTTGTACGTTGAAATTGGCTGTGCTTTCTACGACTTCCATTGAAATTGG TGTTGCTTTTTATGACTTGACGTTTGGTGATGCATTTTTTATCACTCTAT AATATTGAAGTTGATGTTGCTTATATGATTCTGCGTTGAAATTTGTAAgt atttgacattttgaaaaagcaggttattttttgccttcttaaaaaatcaa aatttatttttaattttaatttatttatttttgataaaactatGGCAAAT AAATTTTGTCTTGTTTTCTTTCGTTCTAAA

Coding sequence (CDS) from alignment at sc0000099_pilon:682447..683826+

>MSTRG.12856.1.p1 ID=MSTRG.12856.1.p1|Name=MSTRG.12856.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1506bp|location=Sequence derived from alignment at sc0000099_pilon:682447..683826+ (Clytia hemisphaerica_ch_hm2_pilon)
AGAAACATGGCTGAAGTAAAATCTGATgaaactttgacaaaaaaaacCAT
CATGAAATGGGATGATAAGCACGATGTTTTGTTGGGGCGTGAGCTCTTAT
TCATGAAGCCATATAATTTCAAACCTGGTACCAGAGATAGCGGTTCAGCG
TGGACAGCAGTTGCAGAAGACTTAAACAAGGTCACTGAGGTCAAGTTCGA
TGTGACACAGAAGTCAGTTCGAGACAGAACGAAGATCGCAATAAACAACC
ACAAACGAAAAATGCGTCAACAAATAGCTGAATCCGGGTCAGTGGAAAAT
CCAACGGAAATGGACCAGGTATGGGAGGAGATAAGCTCTGAAATGCAAGA
AGCATCTGAGAAACATGAAGCCACATCCTCTAACAAGAAGAAAGAGGAAG
ACAAATATAAGGCTGATGCTGAAGCAATTCGTGCTACAGCCATGGAAACA
CATGCAGAAACAAGGAAGAGGAAAGCAGCTGACGATGGCAGCCCATCATC
ATCTAAAGGTAAACGCAATACTGGTACTGAGACATTTTCGTTTCTGATGG
CAAAACTTGAAACCGATAAGGAAACAAAGGACAAGGAACtagaaatgaag
aaaatgacTATGGAACGTGaacaacagcaattacaacttttaattgaaca
acagaaacaaatacaggcaaatcaacaacaacaaaaccaaatttctttac
aacTTATTCAAGCTTTATCACAAATGAACAATAAAAACCCTTCAAATAAA
TGAAGAAACATGGCTGAAGTAAAATCTGATgaaactttgacaaaaaaaac
CATCATGAAATGGGATGATAAGCACGATGTTTTGTTGGGGCGTGAGCTCT
TATTCATGAAGCCATATAATTTCAAACCTGGTACCAGAGATAGCGGTTCA
GCGTGGACAGCAGTTGCAGAAGACTTAAACAAGGTCACTGAGGTCAAGTT
CGATGTGACACAGAAGTCAGTTCGAGACAGAACGAAGATCGCAATAAACA
ACCACAAACGAAAAATGCGTCAACAAATAGCTGAATCCGGGTCAGTGGAA
AATCCAACGGAAATGGACCAGGTATGGGAGGAGATAAGCTCTGAAATGCA
AGAAGCATCTGAGAAACATGAAGCCACATCCTCTAACAAGAAGAAAGAGG
AAGACAAATATAAGGCTGATGCTGAAGCAATTCGTGCTACAGCCATGGAA
ACACATGCAGAAACAAGGAAGAGGAAAGCAGCTGACGATGGCAGCCCATC
ATCATCTAAAGGTAAACGCAATACTGGTACTGAGACATTTTCGTTTCTGA
TGGCAAAACTTGAAACCGATAAGGAAACAAAGGACAAGGAACtagaaatg
aagaaaatgacTATGGAACGTGaacaacagcaattacaacttttaattga
acaacagaaacaaatacaggcaaatcaacaacaacaaaaccaaatttctt
tacaacTTATTCAAGCTTTATCACAAATGAACAATAAAAACCCTTCAAAT
AAATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.12856MSTRG.12856Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12856.1.p1.exon1MSTRG.12856.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.12856.1.p1.exon2MSTRG.12856.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12856.1.p1MSTRG.12856.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000099_pilongenomesc0000099_pilon:682447..683826 +