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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000099_pilon:244922..247669+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12842.1.p1 ID=MSTRG.12842.1.p1|Name=MSTRG.12842.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2748bp|location=Sequence derived from alignment at sc0000099_pilon:244922..247669+ (Clytia hemisphaerica_ch_hm2_pilon)
GTTTTATGGCAAGTAGATGGAACTGAAATTTGTCGAAGCTGCGAAACATA
TTCTGTCTCCTTTGTGTGCCAAAACACCAGACATAAAGGCGGCTTATGTG
ATCGATGCTGTAAAAGTGCAAAACACAAATTGATTGGTCCTAAAGGCCCA
ATGGCATCTACTAACATCTACGATTTTACCGTCAAATCTGTTGATTTCGA
GGGTCGAATTTACTTATTTGGCATGGATTGCCGTAAACCACCTCAACAGC
GAATTCATTGGAAATCCACAAGCAGATTAAAAGTGTCATGTCTAGTAGCT
GTGGTTAAAGTTCAAGATCGAAATACACAACTGAAAAAAGATGATCGTAT
CATTTGGGCTGAGGTGAGACAAACTTATAATGTCAATTCGCTAATTATTA
CTTACtttttttACCTTTATCTAGCCCCTCAATTTTTGTATTCCacgcaa
aaaatcgaaaaaatctgTTTTCATGTTCAAGTACTAGGTTTTTCTCGTta
atgaactttttttctcCTTCTTGGTTATGGCAAACCTTGAGCTTTAAATA
GGATCTTAATATGTTAAAGCCTATTCTGAGATTTGTCAATTAAGTTTTTG
CACACTAGCGCCTAGCAACTAATgttatttttgtctcgatcctccgtcca
aCATATAACGCCTTTATATTTGCTAGATTCAACCTTTCAAGATTTATAGA
TCTTTGGGCTCTTCCATAGAGCAAACATTTAAGCTTTAGATGCCAAAGAT
ACAAGTAGTCAGAAATTCTTTGCATGTGGAGTTTGGCCCTATCTCAGTTG
GAGAATTTAAAATACTAATGATTACTCACGCCTTACATAGACCTCTTGAT
GAGCACCATTCTAGTTTAGTGCGGTTTAGTGCAGTAATTGCTAagacaaa
attctaaaaagtcactcaaagaaaagtaaagtaccgatttaaaaatgaaa
aagtacattttcATCCAATCTTTTATCAGGTAAAACAATTTGGGGATCCA
AGAGACGAGTTCAAGAAAAGAGAGGGTGGCCAGATGGTAGTGTCTGATTT
ACGTGACAGTAAGGATGACGATGAAAATGAGTTGAGAGCAGGTGATCATG
TGGTAGTCATCGATTGCAAGACCTTTGTACCTGAACATATTCCAGTGGTG
AAAGCGTTAGAAGATCTTCAACTACTGTCGACTTTACCTTTCAATGACGG
TATGTTAAATTCTATTCTACCGTGTTTCTATCTTTAATGGAAATTCAACT
ACCTTCCTTtttctcgttctcgttctcgttctcgttctcgttctcgttct
cgttctcgttctcgttctcgttctcgttctcgttctcgttctcgttctcg
ttctcgttctcgttctcgttctcgttctcgttctcgttctcgttctcgtt
ctcgttctcgttctcgttctcgttctcgttctcgttctcgttctcgttct
cgttctcgttctcgttctcgttctcgttcgttctcgttctcgttctcgtt
ctcgttctcgttctcgttctcgttctcgttctcgttctcgttctcgttct
cgttctcgttctcgttctcgttctcgttctcgttctcgttctcgttctcg
ttctcgttctcgttctcgttctcgttctcgttctcgttcttgttctcgtt
ctcgttctcgttctcgttctcgttctcgttctcgtttgcgttcgtgtttc
AATCGAAGAATAACAACAACACACTTATATCTTTCTCCTTTTCAGGTGCC
TTGTTGAATATTTCAGTCAATGGCACAACCACACCCATCGACTTCGATAA
AGAATTCCGAAAGTTGTCGGCCAGAAAACGGCATATTCGGAGGGATTCAT
TTGGTGAAATTTCTTCTTCTGATTGTGATTATGATagtgaaacagatgaa
aataAATCATATCAGATGCCAAGCATTGACAAACTTGTTGATTTCATGGT
TGATCAAAGCAAGTTGGAGCCGTTGATTCAAATCAGGAGAGATGCCCCAG
AGAAAGATCTCAAGCTTCTTAAACAACAGCTGTATCGTTTGATGAAAGAA
ACAACGCTTGATCGTGAGCAGCTCAAAAGCTTCATCGAATCTTTTGTAGA
ACCTGTTCATTTAACACAAGGGCCACCGGGGACAGGCAAATCGTATCTCG
GAGTCGTCATTGTCCGTGCCTTGATTATGATCCGTCAAGTATGGATTAAG
TTCTCAGAACATGTTTCAGAGATGCCGATTTTGGTTTTGTCATACAAAAA
TCACGCCATTGATGAATTCCTTGTTGATTTATTGAAAGCAGAAGGTGAAA
TGTCATCTTTGttaaggattggatcgagtgaGAATCCAAAGCTTTCTCGT
TATCTAGAGAAgaatcaaaaaagttacaagAATGATACCCAGCAGTATAA
AACCACGCTGAAAAGTCTATATCAGCAGACAACTATCTATCAACAGATCA
AAGATGATTTGTCCCCATTGAGTGAACATCAGGCTCTGAAGGATTCACAA
CCAACTTCAAATGCGGAAGTGGCTAGTAAGAAGAAAGCAAGCTACGCTGC
TGCAACTTATCTATGCAACGTCATTGCTCGTGTGCAGAAGATTGAAAGCT
TCTTGGAGAAGGAAGAACAAGATGTAGAATCAGATGCTGAATCTGAAGAC
TCTGGATACAGTGATTGCAACATTACCAACCTTTGGAATGATCTGTTTCC
TataaatcatcaaaataacaCGGAAACTGGCCAAAGAAAGACATCTGG Coding sequence (CDS) from alignment at sc0000099_pilon:244922..247669+ >MSTRG.12842.1.p1 ID=MSTRG.12842.1.p1|Name=MSTRG.12842.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4086bp|location=Sequence derived from alignment at sc0000099_pilon:244922..247669+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATTGCCGTAAACCACCTCAACAGCGAATTCATTGGAAATCCACAAG
CAGATTAAAAGTGTCATGTCTAGTAGCTGTGGTTAAAGTTCAAGATCGAA
ATACACAACTGAAAAAAGATGATCGTATCATTTGGGCTGAGGTAAAACAA
TTTGGGGATCCAAGAGACGAGTTCAAGAAAAGAGAGGGTGGCCAGATGGT
AGTGTCTGATTTACGTGACAGTAAGGATGACGATGAAAATGAGTTGAGAG
CAGGTGATCATGTGGTAGTCATCGATTGCAAGACCTTTGTACCTGAACAT
ATTCCAGTGGTGAAAGCGTTAGAAGATCTTCAACTACTGTCGACTTTACC
TTTCAATGACGGTGCCTTGTTGAATATTTCAGTCAATGGCACAACCACAC
CCATCGACTTCGATAAAGAATTCCGAAAGTTGTCGGCCAGAAAACGGCAT
ATTCGGAGGGATTCATTTGGTGAAATTTCTTCTTCTGATTGTGATTATGA
TagtgaaacagatgaaaataAATCATATCAGATGCCAAGCATTGACAAAC
TTGTTGATTTCATGGTTGATCAAAGCAAGTTGGAGCCGTTGATTCAAATC
AGGAGAGATGCCCCAGAGAAAGATCTCAAGCTTCTTAAACAACAGCTGTA
TCGTTTGATGAAAGAAACAACGCTTGATCGTGAGCAGCTCAAAAGCTTCA
TCGAATCTTTTGTAGAACCTGTTCATTTAACACAAGGGCCACCGGGGACA
GGCAAATCGTATCTCGGAGTCGTCATTGTCCGTGCCTTGATTATGATCCG
TCAAGTATGGATTAAGTTCTCAGAACATGTTTCAGAGATGCCGATTTTGG
TTTTGTCATACAAAAATCACGCCATTGATGAATTCCTTGTTGATTTATTG
AAAGCAGAAGGTGAAATGTCATCTTTGttaaggattggatcgagtgaGAA
TCCAAAGCTTTCTCGTTATCTAGAGAAgaatcaaaaaagttacaagAATG
ATACCCAGCAGTATAAAACCACGCTGAAAAGTCTATATCAGCAGACAACT
ATCTATCAACAGATCAAAGATGATTTGTCCCCATTGAGTGAACATCAGGC
TCTGAAGGATTCACAACCAACTTCAAATGCGGAAGTGGCTAGTAAGAAGA
AAGCAAGCTACGCTGCTGCAACTTATCTATGCAACGTCATTGCTCGTGTG
CAGAAGATTGAAAGCTTCTTGGAGAAGGAAGAACAAGATGTAGAATCAGA
TGCTGAATCTGAAGACTCTGGATACAGTGATTGCAACATTACCAACCTTT
GGAATGATCTGTTTCCTataaatcatcaaaataacaCGGAAACTGGCCAA
AGAAAGACATCTATGGATTGCCGTAAACCACCTCAACAGCGAATTCATTG
GAAATCCACAAGCAGATTAAAAGTGTCATGTCTAGTAGCTGTGGTTAAAG
TTCAAGATCGAAATACACAACTGAAAAAAGATGATCGTATCATTTGGGCT
GAGGTAAAACAATTTGGGGATCCAAGAGACGAGTTCAAGAAAAGAGAGGG
TGGCCAGATGGTAGTGTCTGATTTACGTGACAGTAAGGATGACGATGAAA
ATGAGTTGAGAGCAGGTGATCATGTGGTAGTCATCGATTGCAAGACCTTT
GTACCTGAACATATTCCAGTGGTGAAAGCGTTAGAAGATCTTCAACTACT
GTCGACTTTACCTTTCAATGACGGTGCCTTGTTGAATATTTCAGTCAATG
GCACAACCACACCCATCGACTTCGATAAAGAATTCCGAAAGTTGTCGGCC
AGAAAACGGCATATTCGGAGGGATTCATTTGGTGAAATTTCTTCTTCTGA
TTGTGATTATGATagtgaaacagatgaaaataAATCATATCAGATGCCAA
GCATTGACAAACTTGTTGATTTCATGGTTGATCAAAGCAAGTTGGAGCCG
TTGATTCAAATCAGGAGAGATGCCCCAGAGAAAGATCTCAAGCTTCTTAA
ACAACAGCTGTATCGTTTGATGAAAGAAACAACGCTTGATCGTGAGCAGC
TCAAAAGCTTCATCGAATCTTTTGTAGAACCTGTTCATTTAACACAAGGG
CCACCGGGGACAGGCAAATCGTATCTCGGAGTCGTCATTGTCCGTGCCTT
GATTATGATCCGTCAAGTATGGATTAAGTTCTCAGAACATGTTTCAGAGA
TGCCGATTTTGGTTTTGTCATACAAAAATCACGCCATTGATGAATTCCTT
GTTGATTTATTGAAAGCAGAAGGTGAAATGTCATCTTTGttaaggattgg
atcgagtgaGAATCCAAAGCTTTCTCGTTATCTAGAGAAgaatcaaaaaa
gttacaagAATGATACCCAGCAGTATAAAACCACGCTGAAAAGTCTATAT
CAGCAGACAACTATCTATCAACAGATCAAAGATGATTTGTCCCCATTGAG
TGAACATCAGGCTCTGAAGGATTCACAACCAACTTCAAATGCGGAAGTGG
CTAGTAAGAAGAAAGCAAGCTACGCTGCTGCAACTTATCTATGCAACGTC
ATTGCTCGTGTGCAGAAGATTGAAAGCTTCTTGGAGAAGGAAGAACAAGA
TGTAGAATCAGATGCTGAATCTGAAGACTCTGGATACAGTGATTGCAACA
TTACCAACCTTTGGAATGATCTGTTTCCTataaatcatcaaaataacaCG
GAAACTGGCCAAAGAAAGACATCTATGGATTGCCGTAAACCACCTCAACA
GCGAATTCATTGGAAATCCACAAGCAGATTAAAAGTGTCATGTCTAGTAG
CTGTGGTTAAAGTTCAAGATCGAAATACACAACTGAAAAAAGATGATCGT
ATCATTTGGGCTGAGGTAAAACAATTTGGGGATCCAAGAGACGAGTTCAA
GAAAAGAGAGGGTGGCCAGATGGTAGTGTCTGATTTACGTGACAGTAAGG
ATGACGATGAAAATGAGTTGAGAGCAGGTGATCATGTGGTAGTCATCGAT
TGCAAGACCTTTGTACCTGAACATATTCCAGTGGTGAAAGCGTTAGAAGA
TCTTCAACTACTGTCGACTTTACCTTTCAATGACGGTGCCTTGTTGAATA
TTTCAGTCAATGGCACAACCACACCCATCGACTTCGATAAAGAATTCCGA
AAGTTGTCGGCCAGAAAACGGCATATTCGGAGGGATTCATTTGGTGAAAT
TTCTTCTTCTGATTGTGATTATGATagtgaaacagatgaaaataAATCAT
ATCAGATGCCAAGCATTGACAAACTTGTTGATTTCATGGTTGATCAAAGC
AAGTTGGAGCCGTTGATTCAAATCAGGAGAGATGCCCCAGAGAAAGATCT
CAAGCTTCTTAAACAACAGCTGTATCGTTTGATGAAAGAAACAACGCTTG
ATCGTGAGCAGCTCAAAAGCTTCATCGAATCTTTTGTAGAACCTGTTCAT
TTAACACAAGGGCCACCGGGGACAGGCAAATCGTATCTCGGAGTCGTCAT
TGTCCGTGCCTTGATTATGATCCGTCAAGTATGGATTAAGTTCTCAGAAC
ATGTTTCAGAGATGCCGATTTTGGTTTTGTCATACAAAAATCACGCCATT
GATGAATTCCTTGTTGATTTATTGAAAGCAGAAGGTGAAATGTCATCTTT
GttaaggattggatcgagtgaGAATCCAAAGCTTTCTCGTTATCTAGAGA
AgaatcaaaaaagttacaagAATGATACCCAGCAGTATAAAACCACGCTG
AAAAGTCTATATCAGCAGACAACTATCTATCAACAGATCAAAGATGATTT
GTCCCCATTGAGTGAACATCAGGCTCTGAAGGATTCACAACCAACTTCAA
ATGCGGAAGTGGCTAGTAAGAAGAAAGCAAGCTACGCTGCTGCAACTTAT
CTATGCAACGTCATTGCTCGTGTGCAGAAGATTGAAAGCTTCTTGGAGAA
GGAAGAACAAGATGTAGAATCAGATGCTGAATCTGAAGACTCTGGATACA
GTGATTGCAACATTACCAACCTTTGGAATGATCTGTTTCCTataaatcat
caaaataacaCGGAAACTGGCCAAAGAAAGACATCT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000099_pilon | genome | sc0000099_pilon:244922..247669 + |
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