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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000099_pilon:231118..234468+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12841.1.p1 ID=MSTRG.12841.1.p1|Name=MSTRG.12841.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3351bp|location=Sequence derived from alignment at sc0000099_pilon:231118..234468+ (Clytia hemisphaerica_ch_hm2_pilon)
AATTTGCCTTGGAAAAATGGGTGAGAGGTTGATATGAAAATTTCTGTTTT
CACCAATATTTGAGGGAACTTCCTCTTATGTAGCAATTCCCACCTTAAGA
AATTCAAACATTTAACTACATCCCCAATTGCTTAGGTTTCATCAAAATAC
GAGACCTAAATGTATTGCAataaaagtcataatatttgagaaaaaagggt
taACACTTGACTTACAACTTAGGATCTAaacatccaaaagttcaagaatg
gtccaattgAACGTCAGAACATAGCATGGAAGTCtataacccctcccaaa
ttgaaatatttgaataaatttatcaattagctcATTAGCGACTTTCTTGC
Ccaaactttaaattgctgaaaacgaggaattaaccaaaattttgaatata
ttttgaccgagaaaCTATGGTAGCCTTCTAAGAGGTAAGGGTAAGGATTT
CGAGTCTTCAAGAAGcaaaaagtattacaaattgTTTTCGGAAATAAGTT
TGTTTGTCAAATTATATTTTGTGTGGCAGATAGCGATGACAGATTGGTGA
AGGTtttaaacacaattttttttttcttcagagtTCTAATTTCATAGCAA
TTAAATTTGATCTATTTTCACAAGAACTTGTAAACCCAAAAGTTTCTATG
TCTGGGTTTTTAGGAATCATTGATAGATTGATATTGAGATTTGTGATCTG
GTGTAGTGGTGATAAAGTTACGTGACTCCAAAACATTCTCCAACGAAACT
TTCATCTCCAGAGATATTTATAGGCATGTGGTTGTTATAACGTTCATCTG
ACGTTCAACCTTGGACGTTGGCAGGACATATCATTGATTCTAAGCTTTGT
TTTCCTCAAACTACAATAAATCTACATTGAAATGTTAATTCAACTATACA
TTTACACGTGTTattgtaattttctttcttatagTGTTCAaaacctgaaa
gaaaaaaaagcgtTGACAAGTTGACATACAATACGCATGCGCCGAATCTT
AAAAAATGGTTAACTTAGAACGAGACGGATTAGGAAAAGAGCGATTGGAT
CATTTCTTTTCTTACGATGGTCAGAAATGTGCTGACACAGAACCTGATAA
GAATAATAATCGAAACAGCCGCAGATTGAGCCGGGACAGCCGTCGGATAA
GCCGTGACAGTATCAAGAATAAGATAGATATTGAAAGTCAAATCATGCCT
TCATCGAAggaatatcaatttttaaatggACATAGTCAGATAAATACCGG
AcatgaaagcgaaagtgaagaATATATTGATTTAAGACGTGACCGGTACT
GCAACACGCCGTTACGACGTCGTGAAAGTTTAAGTAACGGTAGCACGTGT
GCCAGTAACGGTGGCAAAAAGATGAGTAATTTAGAGGGGATTAAAGAATT
GTTAGCATACAAAAGACAACGTTTCCAAAGTATGGATTCTTTCGAATCGA
CCGTCTCCTTAAATTCAAGATCAAAACGTCTTGTCTGTAAAGACGGCTTT
GTTGACATCAAATATTATAATATTCCCGGTTATAGCTCCAGATTTgctaa
agatttttttcatactttAATGGACATGAAATGGAGGTATATTACTGGTC
TATTTACCATCAGTTTCTTGCTAACTTGGATCGTCTTTGGAACAACCTGG
TTCCTTATCGTGTACCATCGACCCGACAAAAAGTGTCTCGATAATGTAGA
TTCTTGGATCAGCGCCTTCTTATTTTCAATCGAGACACAGACAACGATTG
GATACGGTGGGCGGGCGGTGACGCCTAATTGTCCGGAGGGTGTTTTCTTA
CTCGTTATTCAAACGATTGTTGGAATGTTTGTCAACTGCGCCATGTTGGG
TCTACTGTTCGCCAAATTAGCGCGCCCGAAAAACCGAGGTAAAACAACCA
TGTTTTCTAAACGTGCCGTGGTTACAGTACGTGACGGTCATTTGTGTTTG
ATGTTTCGCTACGTCGATATGCGACACCGTCGGTTGTTAGACACTAACAT
GCGTTGCGTAATCATACGACCAAAGCTGACTGACGAAGGGGAGTTTATAC
CAATTGATATGGCGGATTTGAAATTAACGATCGACTTCCAGCAGGAGGAA
TACTCTATGAGATTATTTCCACTTTTCCCTCTCACAATTATTCACGTGAT
CGACGAAAAGAGTCCCCTCTACGCAATGTCTAAAACACAACTTGAACAAG
CCGAGTTCGAAATCATCCCCATCCTTGAAGGTACTGTACCAACAACAGGT
AACTCAACTCAAGCCTTAACCTCGTACCGGCCAAATGAGATTTTATGGGG
CCACCGATTTAAGCCCGTTTTCACTGGAATGCATATCGGTCAAAAGATCA
ATCGTATAGACTTGAGTACCCTTCATGACACTTACAAAGAAAGTAATACA
CCACCGTGTTCAGCCGAAATGTTCTACAAAACTCAATGCAAGGTTGATGA
GGGGGATGATGATTGCTCCAGTGTTTCAGAATCAAACGGATATGAGAGTG
GACCAGCATCAACTTATTCGACATCTTATAATCAATATAGTACTACAAAG
ACTTTTCTTACAGACGTCGAGGAATTGAGTTTAGACTTGAACAAAGACTA
CATGCAGCACATACCACTAATGAAAGAATCTTCGGCTTGATTAAGAATGA
CATTAAAAACTCTTGCACAGTTCTATCGGGAAACTTAACTGTTTATATGA
CCAAGATTCTGTCATTAATTCATAATCAGTTTTGCGAGGACgctttaaga
aaatttattttactaGTACTTAGTAAGTTTGTTTAGATATCATTATAGAG
TAAATTCCATTGATTGGaccattccattaaatttccatacataGAGGGAT
GGGCGGTTTCTTGGAAATGCGTAGATACCcgctgaaaaatggaaaaattt
gcaaaaatttccttggaaaatttaTACCTTAAAGTGACGGTGGATGAAct
aaatcagtcttttaccccttggaaattttaaaataatttttttatctcct
ggaaaaattaagaaaaaaacactattttagACCCCCTGTATGAACTGGCC
CATTTGTCGaaaaaaaaTCGTAAGAAGGATTGGTTACAGAAAACACCAAA
ACTATACGAGGATTCTTATGTTAGAGAGTTTTGGAATTTAATACCCTTCT
ATCTGTATTATATAAAGAAACTATAAAAAGTTTCATAAAGTTTCCAAGTT
TTCACAGAGAACTATTGCATATTAAAGGAAATTCGATTTCTGTTTGAAAA
ATTAAGTAGTTTCGTTGCTTTAGAAATCTATTTCTTAGTTTGAGTTTTCA
TGCTGTGTCTCGATAAGTTACAAATTTCTCTGCGATCATCTATTAAACAG
C Coding sequence (CDS) from alignment at sc0000099_pilon:231118..234468+ >MSTRG.12841.1.p1 ID=MSTRG.12841.1.p1|Name=MSTRG.12841.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1635bp|location=Sequence derived from alignment at sc0000099_pilon:231118..234468+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTAACTTAGAACGAGACGGATTAGGAAAAGAGCGATTGGATCATTT
CTTTTCTTACGATGGTCAGAAATGTGCTGACACAGAACCTGATAAGAATA
ATAATCGAAACAGCCGCAGATTGAGCCGGGACAGCCGTCGGATAAGCCGT
GACAGTATCAAGAATAAGATAGATATTGAAAGTCAAATCATGCCTTCATC
GAAggaatatcaatttttaaatggACATAGTCAGATAAATACCGGAcatg
aaagcgaaagtgaagaATATATTGATTTAAGACGTGACCGGTACTGCAAC
ACGCCGTTACGACGTCGTGAAAGTTTAAGTAACGGTAGCACGTGTGCCAG
TAACGGTGGCAAAAAGATGAGTAATTTAGAGGGGATTAAAGAATTGTTAG
CATACAAAAGACAACGTTTCCAAAGTATGGATTCTTTCGAATCGACCGTC
TCCTTAAATTCAAGATCAAAACGTCTTGTCTGTAAAGACGGCTTTGTTGA
CATCAAATATTATAATATTCCCGGTTATAGCTCCAGATTTgctaaagatt
tttttcatactttAATGGACATGAAATGGAGGTATATTACTGGTCTATTT
ACCATCAGTTTCTTGCTAACTTGGATCGTCTTTGGAACAACCTGGTTCCT
TATCGTGTACCATCGACCCGACAAAAAGTGTCTCGATAATGTAGATTCTT
GGATCAGCGCCTTCTTATTTTCAATCGAGACACAGACAACGATTGGATAC
GGTGGGCGGGCGGTGACGCCTAATTGTCCGGAGGGTGTTTTCTTACTCGT
TATTCAAACGATTGTTGGAATGTTTGTCAACTGCGCCATGTTGGGTCTAC
TGTTCGCCAAATTAGCGCGCCCGAAAAACCGAGGTAAAACAACCATGTTT
TCTAAACGTGCCGTGGTTACAGTACGTGACGGTCATTTGTGTTTGATGTT
TCGCTACGTCGATATGCGACACCGTCGGTTGTTAGACACTAACATGCGTT
GCGTAATCATACGACCAAAGCTGACTGACGAAGGGGAGTTTATACCAATT
GATATGGCGGATTTGAAATTAACGATCGACTTCCAGCAGGAGGAATACTC
TATGAGATTATTTCCACTTTTCCCTCTCACAATTATTCACGTGATCGACG
AAAAGAGTCCCCTCTACGCAATGTCTAAAACACAACTTGAACAAGCCGAG
TTCGAAATCATCCCCATCCTTGAAGGTACTGTACCAACAACAGGTAACTC
AACTCAAGCCTTAACCTCGTACCGGCCAAATGAGATTTTATGGGGCCACC
GATTTAAGCCCGTTTTCACTGGAATGCATATCGGTCAAAAGATCAATCGT
ATAGACTTGAGTACCCTTCATGACACTTACAAAGAAAGTAATACACCACC
GTGTTCAGCCGAAATGTTCTACAAAACTCAATGCAAGGTTGATGAGGGGG
ATGATGATTGCTCCAGTGTTTCAGAATCAAACGGATATGAGAGTGGACCA
GCATCAACTTATTCGACATCTTATAATCAATATAGTACTACAAAGACTTT
TCTTACAGACGTCGAGGAATTGAGTTTAGACTTGAACAAAGACTACATGC
AGCACATACCACTAATGAAAGAATCTTCGGCTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000099_pilon | genome | sc0000099_pilon:231118..234468 + |
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