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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000098_pilon:1085561..1092296+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12818.1.p1 ID=MSTRG.12818.1.p1|Name=MSTRG.12818.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6736bp|location=Sequence derived from alignment at sc0000098_pilon:1085561..1092296+ (Clytia hemisphaerica_ch_hm2_pilon)
cgtCAGCAGAAAAATAGTAAGAACATTTCACATgaagaaggtgaaaggaa
ggaaaggagtggaaggaaaaaagataaagaaaaaatgagGATTATATTAC
AGATTTTGTTTTTGGTTATACTGCTTTTTGAAACTGAAGCCAAATCAAAA
AGCGAAGAATACCAAAAACcaaaacatgatttttttacttcGGCGTCAGA
TATGGAAGTattgttaaatgttgaaaagaaGTTGTCTAAGAAGTTTCTTA
GATATGTTCGTAAAGAAGAGGAGAGGCTTGATAAGTTGGAGGATGAGATA
CGAAACATTGAAGATGGTTGGCCACAACCAGGTCGTAGTAAAGCTCAATG
GTTATCACACGTCACTAACTCGTACACTATTTTAAAGAGATTCTCAACCT
TTTGGCCGAAAATTGGTGATTTTTCAAAGTCTAATACAACCAAAGATCAC
ATGCTGAGATTGTTTTCTGATTTAAGTCGAATCAAAGAATCACTTCCCGC
CGAGGAAGATATGAAAGGAGCGTTGAATGCTGTCTTCAGGTTACAAGACA
CTTATGATTTACCTGCAGCAGATTTTATTGATGGTTTGGGAGGAGACCGC
GCGCATAAATTAAGCGTTGAAGAGATTTTCGAGATTGGTTTTCTATGTGT
AGGCATCAATGATCATTACCACGCACAGCAATGGTTAAACGAAGCTCTGA
ACCGCTTCCCGGTTGGCATACAACAAGTTGGATTCTTAGATAGAATCTCC
CTTTTAGGTGAGGAtttttttAATAGGCAATGGCATGGTCAAAActtgat
gttttttataagaatattcatcatGATAAAGTTGGcctaaaaatttagaa
tatcACTATCATGGAGTTTGGcaactgaagctaagaatgtccTTTTTAGA
ACATTTCTAACATGAAATTGTCATCTATCCCCCACTAAGGCTAAAAGGTT
CATAAAGATGCTATTTTATACTTTATAGGTACATGaatcaaaaagttaac
aaaattttttgaattttcttacaAAACAAAACGTGTACTTTCTTATTATT
TGTAAAAAGAATTGTTCATCGATTGcaaatacttttttcttttataagaa
caacgaggctcaaaatcgctaaaaaataaaacaatttatgAACAATaatg
agcctgaaattactcaatttcaagcaatatagggagtcaaagtagtaaaa
attgggtataacgcctaaaatacctcaattacaccctaAATCATTGTCAT
GAAATCAtattgaatacacgtttttttttattagaacacctaaaatttgg
ctgagcctggatgtgcttatttttttaagcaattttcagcctaaaatgtt
tcttaaatgcgttcttaatttttcaaatcgacaatatcatgcaaaataaa
tagcacttaaaattagtaaaaatttggacaatatttgaccctcgatttta
gaaaatccatgcctgagttcggttaaaactgcttgaaaagagtagtaaaa
ttgtagtttcttgtcatttttttccaaactgaggctgggcatgttcttac
gatgttcttaatttttcgacgaatttcagcctcaatgttcttataaactg
ggttctaataaaaaaaaaacgtgtagtgctCGATGATAAACAAACAAGAT
ACCAGAGCCAAGTAAAATTTAAAAGCGCCAAACTTTAAGTTATgtacttt
tattgaaagaaaactttttttcaattacACCCTAGAATAAGAGCAATTGA
AGTGCCaaaaaaaCaagaattcttataaaaaagtgtactgTAAATTTTAG
AGGTACGGCTTAAAACCTTGGCTACAAATATGTTATAAAAATTAcaagat
tttaagaaataatggaATACTGTACTACTATACAAAGAATTCATCTTtac
aaaaagcgtgtattttgaaaagaaagatcACTCACTTATCAGAGAAACCT
TTTTGTTGTTCTTGGTGAAACTGATTTGATATCTTTCGCTCGAACCTGTT
GGCCCTTCTTCTTGCCCTAAAGAAAATGGTGAATACTTCCATTACTTTCA
AAGTgttgaaaaaccaaaaaaatctacaacgaaaaagaaataaaatacac
aaacaactttcgaacaaataaagagaaaaagaaaaatgatgattttacaa
aaatcaaaggAATTATACAGAATGTGAGCTTGAAATTAAAGGCCCCCCTC
CTCAatggcataccggataagtgggatgggggaacctaagtgggaaccta
aatgaacacctgaaaagtgggatgggggaacctaagtgggaacctaaatg
aacaccggaaaagtgggatgggggaacctaagtgggaacctaaatgaaca
ccggaaaagtgggatgggggaacctgggaacctaaagtgggaacctaatt
ttttattttttttatttttttttttatttttttttttatagcaatatatt
tcgcacgtCCATTGGCctcctatgaaacagaacttttgattttacatttt
ataaagttttttctccctttcttttatcaaacgctctttgaagacttgta
aggatggtgcttcaacaatatcttcttctagatcattccaaggtttcaca
cttctgtaaaaaagagagttgctttggtagcctctcataccgtcattagc
aaagttcctttgaagctcgtaatcatgctgacgtcgtggtcgtgttcgag
gagtaaatttctctgatcttatagactcgtcataaatgtggaggttcttg
aaaacttccaccatatcaccaacttgccgcctggtctttaggctaggtag
attgatgagtcgtagccgatcttcgtatgagtagtttctatagcaactaa
ctagccttgtagctcttcgttggacgccctcgattgcattgatatgtttg
attagccttggagaccatactacatgtgcatattccaaatggggtctgac
aaatgcaatgaaaagcgttcgaaacatatctggtgagagaaattcgaagc
tcctgctaatcaagccaacgatagagttagctttcttgattttactgaat
atatgggcttcaaaggtcaggtcactatcgattatcactcctagatcttt
ttcttggtcaacatgttctagaacagatcctgatagggatggacatattt
gatgttccaaaatttacccagtgttaaaacatgacacttgttcggatgaa
attctaaaagctttgaccaaattttaaacccttagagtgcacttattctc
atttttgctcatttccacccttacagtgtactttgggaagcttggaaaaa
agggccgcacgtacggtaggtcgtttaccttgagtgtcccccccccgtgg
atctatgcttatgtgtattgaaacgtggcaagccgtgtaatatgttctat
tttactatcaaacatttttaattaatgaagtgtattcacacgctgtactg
tttggttggtacagaaagaaaaacgagctagaatccgttaaatgctaagc
gaccccagccctgacccgaaaattggagctgcgaataaaaaacaatgtgt
attgcatcaagagtgaacaaaaactagatcgtaaataatgttttactaga
tactgtattcaagcaaattagatccgcgcaaaagaaagaagaggctctaa
gttatccatcgagctatgaacgaacttctaattccttctagatttgaaga
tatgacggtttaaagtttaaagtttaaagtcaattaagtgaatttactaa
aaagaacctttcagatgcactataaaactgctgataaataaacatgcttt
tttgagctaattgaataaataaattccctttgttttattttcaacattat
tgtttgcgaaccgtaatgtaaagagtaaataactggtgttcttattatga
taaaaggttttttccacaggaaaaagtatggaaatcacatgcttggtaaa
actgatttccgagcatgtgatcctgcaaaaaatcacatgcgtgtgaaaat
gcAATTCACAAGTCATCTTTTCTCAACTTAAATGGAGTGTCTGACTAGAT
ATAAAATCACAAATAGGATTGTTTGTCTTTCTTAGAGAGAGAGGTTTAAT
ACCCTAAAAGTAACTCACTTCTATTCTATTTAACAAGTGAGAAAAGATGG
ATTGTGAATTacattttcacacgcatgtgattcacGGATATTTTCCTGTG
TTCTTTccttgcatataatatctttcttatctttatgtatttgtttttaa
agaaaaatatttcaattctattaataattaaacaacttaggttcccactt
aggttcccccatcccacttttccggtgttcatttaggttcccacttaggt
tcccccatcccacttttccggtgttcatttaggttcccacttaggttccc
ccatcccacttttccggtgttcatttaggttcccacttaggttcccccat
cccacttttccggtgttcatttaagttcccacttaggttcccccatccca
cttttccgttgttcatttaggttcccacttaggttcccccatcccacttt
tcaggtgttcatttaggttcccactttaggttcccaggttcccccatccc
acttatccggtatgccctCTTCAATCAATGAAATACAATCTAATATTTGC
AAGGGGCGGAGCTTCAAGCTAACATTATAAAGTCATATAGATAAAGTTTT
CCAGGTAGGGAGATAATGGGGGCGTATCATGAGGAAGAATTGAAGGCGTA
GTCCTGGTGGAGGGCGGTTGAAAAGAACATATTATAAAGCATAACCCTTT
TAACCATACTTAAGCCTACAAAACTTAAGTATTGTCGAGAGTATTGTTTA
TCCGAggttcaaaaaaaaaagcatttacAAAACATAAAGAGAGGTTAGCA
AAGACTTAGCCTttgtttataataaaaaaagtgtcTACCTGGAACCAACC
CTGTCCTGCTGATGGAGAACAAACCATGTTATTAAAGCCTTATTAGTCTT
AACTGATTTGATCCTCCTGCaaaaaaaaCACATGACCGGGTAAGCAAAAG
TCAAGTAATAAAACGAGTTGAGAAGATACTTGTTCGGGATTATATGGAAT
TTTaatacaaaatatttctttatttcttttcagAATATTTGGCATGGTCT
GAATACCACTTAGGGCACTTGGAACAAGCTGTTAACCTTACCGCACAGAT
TGTACACATTGATCCAACTCACAAATCAGCACCCATCAATCTAGAGTTAT
ATCAACATGATTTAAAAGCTAGTCAATTCAATCCTAACATCCGCAAGAAA
GTTTTCCGGCGCGAAAAAGATTGGCAGACACGTCACAACAATCTGTGTAA
CGGGAAAGAAGTCATGGAGCAGGAAATTATTGATAAGTTGTATTGTGAAT
TCGATAACAAACGTCACCCACGTTTTATCCTAAAGCCACTCAAAGTTGAA
CATCTGTACAACGAGCCAGGTTTAACAATGTATCATGATTTACTTCGTGA
CTGGGAGATAGATGCCGTCAAAGAGAAGGCGCGTCCGCTTTTAAAACGCG
CGACCGTTCATGATCCGAAAACGGGTGAATTGGTTTTCGCAGATTATCGG
ATTAGTAAGAGCGCCTGGTTAAAACCGGAGATGGATCAAATAGCAAACCA
CGTGATCAATAAAGTTGGTGACGTCATTAATCTCGATATGCGATACTCAG
AGAGTCTGCAAGTCCAAAATTACGGTTTAGCGGGTCAATATGAGCCACAT
TTTGACCATTCAACTGTCCGCACACCAAAACAATTCAAGGAATTGGGTGG
AAACCGTATCGCTACTATGTTGTTATATATGAGTGAAGTTGAACGAGGAG
GTGCCACCATTTTTGTTAACACTGGCCCAGGAGTCGCCATCTGGCCGGAG
AAAGGTGCCGGTGTCTTTTGGTATAATCTATTACGTAATGGTGATGGAGA
TAAAAAGACAAGACATGCAGGCTGTCCAGTTCTTGTTGGACATAAATGGG
TGTCTAACCTGTGGATACATGAACATGGACAAGAGTTTAGAAGGCAATGC
TCGCTAAATATGCatgaataagaaatttaaaactaCGTaaaaaaaaaTGG
CTATCGTAAATTGAAAACTTTCAGGCTGAAGAAGTGAGGTTAAAGAAGTT
GAACGTTCTCTTCATGTTAAAACCAATACATAAAactgaaaaggtgtatt
agatgATATATCATTTGAGGAGGGTTTACTCCcaaaatattaataaaaat
caggaaaataatTGTAAGAAGTATAGATTTTGTATCGAATTTCGGAGGTg
ctggaagaaattttgattgtCGATAAATACCGACGCGATTGCGTtaaatc
ataaaatttcaatCATATTTGAATTTTCATATATCTTTAAATTTCTATGT
ATGAGTTTTTTATGtacaaatgtttaaaatatttccaaaatatttacatc
TCAGCAAAAAGCATGACTTAATAATATATACAAAACGATGAGATTGTTAT
AAATATTCAATCAACAACACTTAGctgtttttgtttccttgccatTTGCG
TACGTAAATCACGAACTTGGGTCATCAAGTCCATCTGTCGACCAGTGAAA
GAGCCTCGATCACTCAAGTCGTCCTCGTCCCTCGCTAACACTGCCAGGAG
AGAAAAATCCAGCTGATCATTTTatagatttaaaaattgaaatttcaata
caaACTTGGTTTATTGATACACTAGTAAAcctagag Coding sequence (CDS) from alignment at sc0000098_pilon:1085561..1092296+ >MSTRG.12818.1.p1 ID=MSTRG.12818.1.p1|Name=MSTRG.12818.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3222bp|location=Sequence derived from alignment at sc0000098_pilon:1085561..1092296+ (Clytia hemisphaerica_ch_hm2_pilon)
atgagGATTATATTACAGATTTTGTTTTTGGTTATACTGCTTTTTGAAAC
TGAAGCCAAATCAAAAAGCGAAGAATACCAAAAACcaaaacatgattttt
ttacttcGGCGTCAGATATGGAAGTattgttaaatgttgaaaagaaGTTG
TCTAAGAAGTTTCTTAGATATGTTCGTAAAGAAGAGGAGAGGCTTGATAA
GTTGGAGGATGAGATACGAAACATTGAAGATGGTTGGCCACAACCAGGTC
GTAGTAAAGCTCAATGGTTATCACACGTCACTAACTCGTACACTATTTTA
AAGAGATTCTCAACCTTTTGGCCGAAAATTGGTGATTTTTCAAAGTCTAA
TACAACCAAAGATCACATGCTGAGATTGTTTTCTGATTTAAGTCGAATCA
AAGAATCACTTCCCGCCGAGGAAGATATGAAAGGAGCGTTGAATGCTGTC
TTCAGGTTACAAGACACTTATGATTTACCTGCAGCAGATTTTATTGATGG
TTTGGGAGGAGACCGCGCGCATAAATTAAGCGTTGAAGAGATTTTCGAGA
TTGGTTTTCTATGTGTAGGCATCAATGATCATTACCACGCACAGCAATGG
TTAAACGAAGCTCTGAACCGCTTCCCGGTTGGCATACAACAAGTTGGATT
CTTAGATAGAATCTCCCTTTTAGAATATTTGGCATGGTCTGAATACCACT
TAGGGCACTTGGAACAAGCTGTTAACCTTACCGCACAGATTGTACACATT
GATCCAACTCACAAATCAGCACCCATCAATCTAGAGTTATATCAACATGA
TTTAAAAGCTAGTCAATTCAATCCTAACATCCGCAAGAAAGTTTTCCGGC
GCGAAAAAGATTGGCAGACACGTCACAACAATCTGTGTAACGGGAAAGAA
GTCATGGAGCAGGAAATTATTGATAAGTTGTATTGTGAATTCGATAACAA
ACGTCACCCACGTTTTATCCTAAAGCCACTCAAAGTTGAACATCTGTACA
ACGAGCCAGGTTTAACAATGTATCATGATTTACTTCGTGACTGGGAGATA
GATGCCGTCAAAGAGAAGGCGCGTCCGCTTTTAAAACGCGCGACCGTTCA
TGATCCGAAAACGGGTGAATTGGTTTTCGCAGATTATCGGATTAGTAAGA
GCGCCTGGTTAAAACCGGAGATGGATCAAATAGCAAACCACGTGATCAAT
AAAGTTGGTGACGTCATTAATCTCGATATGCGATACTCAGAGAGTCTGCA
AGTCCAAAATTACGGTTTAGCGGGTCAATATGAGCCACATTTTGACCATT
CAACTGTCCGCACACCAAAACAATTCAAGGAATTGGGTGGAAACCGTATC
GCTACTATGTTGTTATATATGAGTGAAGTTGAACGAGGAGGTGCCACCAT
TTTTGTTAACACTGGCCCAGGAGTCGCCATCTGGCCGGAGAAAGGTGCCG
GTGTCTTTTGGTATAATCTATTACGTAATGGTGATGGAGATAAAAAGACA
AGACATGCAGGCTGTCCAGTTCTTGTTGGACATAAATGGGTGTCTAACCT
GTGGATACATGAACATGGACAAGAGTTTAGAAGGCAATGCTCGCTAAATA
TGCatgaataaatgagGATTATATTACAGATTTTGTTTTTGGTTATACTG
CTTTTTGAAACTGAAGCCAAATCAAAAAGCGAAGAATACCAAAAACcaaa
acatgatttttttacttcGGCGTCAGATATGGAAGTattgttaaatgttg
aaaagaaGTTGTCTAAGAAGTTTCTTAGATATGTTCGTAAAGAAGAGGAG
AGGCTTGATAAGTTGGAGGATGAGATACGAAACATTGAAGATGGTTGGCC
ACAACCAGGTCGTAGTAAAGCTCAATGGTTATCACACGTCACTAACTCGT
ACACTATTTTAAAGAGATTCTCAACCTTTTGGCCGAAAATTGGTGATTTT
TCAAAGTCTAATACAACCAAAGATCACATGCTGAGATTGTTTTCTGATTT
AAGTCGAATCAAAGAATCACTTCCCGCCGAGGAAGATATGAAAGGAGCGT
TGAATGCTGTCTTCAGGTTACAAGACACTTATGATTTACCTGCAGCAGAT
TTTATTGATGGTTTGGGAGGAGACCGCGCGCATAAATTAAGCGTTGAAGA
GATTTTCGAGATTGGTTTTCTATGTGTAGGCATCAATGATCATTACCACG
CACAGCAATGGTTAAACGAAGCTCTGAACCGCTTCCCGGTTGGCATACAA
CAAGTTGGATTCTTAGATAGAATCTCCCTTTTAGAATATTTGGCATGGTC
TGAATACCACTTAGGGCACTTGGAACAAGCTGTTAACCTTACCGCACAGA
TTGTACACATTGATCCAACTCACAAATCAGCACCCATCAATCTAGAGTTA
TATCAACATGATTTAAAAGCTAGTCAATTCAATCCTAACATCCGCAAGAA
AGTTTTCCGGCGCGAAAAAGATTGGCAGACACGTCACAACAATCTGTGTA
ACGGGAAAGAAGTCATGGAGCAGGAAATTATTGATAAGTTGTATTGTGAA
TTCGATAACAAACGTCACCCACGTTTTATCCTAAAGCCACTCAAAGTTGA
ACATCTGTACAACGAGCCAGGTTTAACAATGTATCATGATTTACTTCGTG
ACTGGGAGATAGATGCCGTCAAAGAGAAGGCGCGTCCGCTTTTAAAACGC
GCGACCGTTCATGATCCGAAAACGGGTGAATTGGTTTTCGCAGATTATCG
GATTAGTAAGAGCGCCTGGTTAAAACCGGAGATGGATCAAATAGCAAACC
ACGTGATCAATAAAGTTGGTGACGTCATTAATCTCGATATGCGATACTCA
GAGAGTCTGCAAGTCCAAAATTACGGTTTAGCGGGTCAATATGAGCCACA
TTTTGACCATTCAACTGTCCGCACACCAAAACAATTCAAGGAATTGGGTG
GAAACCGTATCGCTACTATGTTGTTATATATGAGTGAAGTTGAACGAGGA
GGTGCCACCATTTTTGTTAACACTGGCCCAGGAGTCGCCATCTGGCCGGA
GAAAGGTGCCGGTGTCTTTTGGTATAATCTATTACGTAATGGTGATGGAG
ATAAAAAGACAAGACATGCAGGCTGTCCAGTTCTTGTTGGACATAAATGG
GTGTCTAACCTGTGGATACATGAACATGGACAAGAGTTTAGAAGGCAATG
CTCGCTAAATATGCatgaataa
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000098_pilon | genome | sc0000098_pilon:1085561..1092296 + |
|
