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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000098_pilon:852588..856887+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12802.1.p1 ID=MSTRG.12802.1.p1|Name=MSTRG.12802.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4300bp|location=Sequence derived from alignment at sc0000098_pilon:852588..856887+ (Clytia hemisphaerica_ch_hm2_pilon)
atcaaatttcatcaaaatatatgttttgaacaACGTTAATAAGAGTTTCC
CTCTTGTATAAAATGTCTTTCCTGCTTTAACAGTAGATGCAAAGAAGATG
TGCGGTTCAATAAACTTGTCACTGTTAACATTGCtttttttAGTAGGTAT
GTGAAAACGCCAACATAGTACTTATGCACCCCCTTTTTTAATAGGGTGAT
GCCAACTTTTCTTCTAGGGGACTTTTAGTTTCATTTTCGAAGAATCTTCG
CAAAAATGTTATACAGTAAACTCTAACTTATCCGaccttctattattcga
atctttctttccGTCAAAGAAAAACTCTcctaaaatactttctataattc
gattcTCTCTGCAATTCGAGCCAAAAATACCCCCCTCAGAGtgcgaatta
gcgagagtcaactgtgcTTTAAAATTACAAACCATTTCCTTTAAAAGCAA
TGTAGGTAAATGTGCAGACTGACAATTCTTTTTTAAGTAGActttgaata
tttaaaaactcacgacgacaattttttttcttcagaaacgGCGGTTTGTT
GGAGGATAATATAcgtttcaaaaaatggaaacagTACAGAGAAGAAGGAA
TGTGGATCATTCATCAAACCATGCAAACATTTGCATCAAGCCATCGAAAT
CTCCCATCACTCTGACATCATTCTGATGGATTCGAAGTATATTTATAATC
AGTACAATAGCATTGTCATCCCTCGTTCGTTAAACATCTCAAGTTATTCT
GCAGAACGGCGAATAAACGATGATAGAGCCACTTTGGACTTTCTCATTCT
CATTGAAGAAAAAGCATTTTTCTACATTCACCAAAACTTTACTCTTATAA
ACATTTCAATGGTGGTCAACCCCAGAAGTTTTTCTTCTCCCATTGTTTTT
GGCACAGAAAGTGaccaaaatttctcaaaagtatCAGTTATCAACTGTGT
TTTCAAACAACCAAGTAATTACATTATGATATTTTTCGGACTTTTCACAT
CATTAGATGTGGAGTTTGTAAACACAAATTTCATATCTTCTGCAACAAAT
ACATGGCATGCAAGAAGAAAAGAGCGGGCTTTACACCAAAAAGATATCTT
CAGGCATTATCTTGCAAAGAGAATTACATTCCTCaaatgtatttttcaaa
attttagatgttcagGAACAGGACTAGAAAACTCCGAATGGTATTTTTGG
AACAATACTTTCAAAAAGGTGGATCTTGAAATTAGAGGGGATATGACTTC
GGTGCACTATGTAAACAATACATTTGAAGATAACTCCTATCTCGTACAAT
GGAATTCAGAAACCGCCTCACAGAAtaagacaaaagaaaatctaggAAAA
GGACGATCTACCAAAGTAGTGGATTGCAAATTTCGCAACAGTATCGCTCG
ATTTAAGATTGATGGATCGCCTACTGCCAATGAGCTGCTTATATCAAACA
CGCATTTCGAAAATTCACCTGTTACTGTCAAAGTTTACGGGGGTTTGCCT
TTGAACGTGATTGTGGAAAGCTGCTCATTCAAAGGTTCCGGAGATTACCC
ATCGTCAAGCCAAGTAGAGTTCACTGCATTAAGGTCAAATACAATAATAA
AGGCTACGGTACTAAATTGCACGTTCAGAGATTCGGTTGCCGGTTCCGTT
TATTCTGACGGCTTCATCACCAACATAATTAAAACGACATTTTTGAACAA
TTCTTTAACCGACAATCGATATTTCACTAATACCAGAGCTGCCGCATTGA
CTATAACATCTTCAACATATGTGTATCTTGTCAATTGTACTTTCCTAGAC
AACAAAGCGCTACCAACTTTCTTCGACTCTATTTACATAGTAATGGCAGG
TTctagtgaaatatttttaaatatctcTAATTTGATCGTCGTATCATCAT
CAATTGTGCCAGGAGCACAGAGTAGCATATTACAGTTAAAATCAGATGGT
TTCATGTACGGCTTTCCGAAGATCCTTGATTCAAGCGTGTTTTGTGGTTT
GCCAAACTATAATGTATATGACAATATAGAGGAATTTAATCCAATTTTTG
TGCGGCTCTCATGCCACGAGTGAAATACGAAATACAATGCTCAATACAAA
TCAAAAGTAGTGTGGGATGCGTTTGGTGATGTCAAAGTTCGCAACTCGGA
ATGCTACGATTGCCCGTATGAAGCCTCTTGTATCAATGGTATCAAGAGTA
AAGGTAATTATTGGGGATATGCTAATGATTCTGGGTATGTGGCTTTCGTG
CAATGCCCTCCTTCCTATTGCTGTCCTACTTTAAAGAAATGTGATTCTTA
TAACAGCTGTGCGAACAATCGACAAGGAAGACTTTGTGGTGAATGTAAAT
CCAATCACTCGATCAGCCTATTTGGTGGTTCACGCAATAGATGTGTGGAA
ACGTCAACTTGCCAAGGAGGCTGGTGGCTCTGGCTCCTATACGCTTTTGT
CATTATTCTTGCATTGATAACTGTATTGTACTATAAAGACGTCTTTGAAG
GAATGACATCCAAATTATGTTGTTGCTTTTCATCGCATAAAGAAGAAATA
CAAGAGCAGTCGACCAATCCCGAAGACAGGACGGTAACTTCGCATCTATT
AATAGACAGCAGAGATGAGATACCACAGAATCAACGAACATCCGTCAAAT
CTTCAGGAATCATTAAAATTGCCTTCTTTTTCTACCAGTCGGCTTCCATC
ATTAGAATTAACGCTCCAGCGAAATTGGAATACCACATGCCCTTCATAAT
CGACATTCTAACTTCCTTCTTTAACGTAAAAATAGACGTCGGATCTGCTG
ATTTAATCAACATTTGCCCGTTACAAACCCAAAATGTTGCATTGATCGAA
CTCGTTCGTTTGAGTCTAATCTTGGGGATGATTGTCTTGACAATCGTGTT
ACTGTTTGTTTTGAACATGTATCGACGCTGTCAAAAAGTTCGACACCAGA
CTTCTTCTTTCACCGTTCGATTGAAGATAACCTATACCCAGTTACTTGTG
ATTGGTTATGCAAGCATTGCCATGTTTTCTATTCAATCAATCGACTGTAT
TTATATTGAGCGTGATTGGTTCATTTTCAACCAAGCTCATTTGAAGTGTT
TACAGAGTTGGCAGATTGTTATTATCTTGCTCATCGTTTCGTGGGTTGTA
CCTTTTCCCGTTGCTATGTATTTTGGGAACAAGTTGTTAAGGTCCGGAAA
GATCACACCGAATAAGTTTTTAATGACGCTTATGTTTCCTCCTCTATTAC
CAATTGTTTTGATCAGAAGCAATCGCATTGGCTATCATGCATGGACAGAT
CAACAGCAAAAAGAGAGAATGGGTATCCTTAATTTACTCAGCGAACCTTT
CAGGGAGAGAGAGGCCAAGGATGATGAAGTTGAGAAAATTATATGGGAGC
CTGTGCTCATCACACGTCGCTTGATTCTTGTTATCACCATCACGTTTGTA
CGGTACCCGATCATGAAGCTGTACCCTACTGGAGTCCTATTAACATTATT
TACAATACACGACTATCTTGAGCAACCGTTCGTCGAACCTTTCCTCAATT
TCGTTCAGTTGATATCTATGTTGCTTTTGGGAACTCTCGTTCTTTGTAAC
ATGTTCTGGGCTTTTTCCATGAATATTGACATCCTGGAGAGCTCACAATA
TTATATATTTGGGAATATTTTACTTATTGTTGAGTTGTGTATTTTGTTGG
TCCCTGTCTTTTTAATGGTGTTTTGTCTTATTTGGAAGTTGGGAAAAGTG
TTTTACAAAGGATGTCTTCGGAAATTGGACTAATTTATTCTTCGTTCTTT
TTGTTGTATCTAATTATTCTTATTACTCTGGATTATTACTATCTTGGGCT
GAGATTTAAGGAGCCAACGTTCATCCTTCGTACAGCTTAGAAAAAGAGAA
CATTCAAGTGCAAACGAACACAAAAAGAAAGGGAACTTTTCAGCGTTAAT
TCAGTCTTTTAGTTAATTGTGTATACTTACCTAATGTCTTCTACTcatca
tttttaatgaaatgCCATTTATTTAGAAGAAttaaattttaagtattttt
agtAGACTTTCTTTGACGTTTCTTATGAGCTTAactgtgaattatttttt
tggactGTAACAATCAATAGAACAATCAGTGTTTATTTTGTGATTTCAtc
ttaattattatttttcgaaaaacaaaaacaaaacagaaccCAGATAAGAC
TTTTATTCACTTACATTAATTTCTTTGTGTTTCTTGTCATCTATCACTTT
CTTCAGATCGGTTTGTGATTTCTTTGATATCTTCTCCAATTTGACAATCT
Coding sequence (CDS) from alignment at sc0000098_pilon:852588..856887+ >MSTRG.12802.1.p1 ID=MSTRG.12802.1.p1|Name=MSTRG.12802.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3174bp|location=Sequence derived from alignment at sc0000098_pilon:852588..856887+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTGCGGTTCAATAAACTTGTCACTGTTAACATTGCtttttttAGTAGa
aacgGCGGTTTGTTGGAGGATAATATAcgtttcaaaaaatggaaacagTA
CAGAGAAGAAGGAATGTGGATCATTCATCAAACCATGCAAACATTTGCAT
CAAGCCATCGAAATCTCCCATCACTCTGACATCATTCTGATGGATTCGAA
GTATATTTATAATCAGTACAATAGCATTGTCATCCCTCGTTCGTTAAACA
TCTCAAGTTATTCTGCAGAACGGCGAATAAACGATGATAGAGCCACTTTG
GACTTTCTCATTCTCATTGAAGAAAAAGCATTTTTCTACATTCACCAAAA
CTTTACTCTTATAAACATTTCAATGGTGGTCAACCCCAGAAGTTTTTCTT
CTCCCATTGTTTTTGGCACAGAAAGTGaccaaaatttctcaaaagtatCA
GTTATCAACTGTGTTTTCAAACAACCAAGTAATTACATTATGATATTTTT
CGGACTTTTCACATCATTAGATGTGGAGTTTGTAAACACAAATTTCATAT
CTTCTGCAACAAATACATGGCATGCAAGAAGAAAAGAGCGGGCTTTACAC
CAAAAAGATATCTTCAGGCATTATCTTGCAAAGAGAATTACATTCCTCaa
atgtatttttcaaaattttagatgttcagGAACAGGACTAGAAAACTCCG
AATGGTATTTTTGGAACAATACTTTCAAAAAGGTGGATCTTGAAATTAGA
GGGGATATGACTTCGGTGCACTATGTAAACAATACATTTGAAGATAACTC
CTATCTCGTACAATGGAATTCAGAAACCGCCTCACAGAAtaagacaaaag
aaaatctaggAAAAGGACGATCTACCAAAGTAGTGGATTGCAAATTTCGC
AACAGTATCGCTCGATTTAAGATTGATGGATCGCCTACTGCCAATGAGCT
GCTTATATCAAACACGCATTTCGAAAATTCACCTGTTACTGTCAAAGTTT
ACGGGGGTTTGCCTTTGAACGTGATTGTGGAAAGCTGCTCATTCAAAGGT
TCCGGAGATTACCCATCGTCAAGCCAAGTAGAGTTCACTGCATTAAGGTC
AAATACAATAATAAAGGCTACGGTACTAAATTGCACGTTCAGAGATTCGG
TTGCCGGTTCCGTTTATTCTGACGGCTTCATCACCAACATAATTAAAACG
ACATTTTTGAACAATTCTTTAACCGACAATCGATATTTCACTAATACCAG
AGCTGCCGCATTGACTATAACATCTTCAACATATGTGTATCTTGTCAATT
GTACTTTCCTAGACAACAAAGCGCTACCAACTTTCTTCGACTCTATTTAC
ATAGTAATGGCAGGTTctagtgaaatatttttaaatatctcTAATTTGAT
CGTCGTATCATCATCAATTGTGCCAGGAGCACAGAGTAGCATATTACAGT
TAAAATCAGATGGTTTCATGTACGGCTTTCCGAAGATCCTTGATTCAAGC
GTGTTTTGTGGTTTGCCAAACTATAATGTATATGACAATATAGAGGAATT
TAATCCAATTTTTGTGCGGCTCTCATGCCACGAGTGAATGTGCGGTTCAA
TAAACTTGTCACTGTTAACATTGCtttttttAGTAGaaacgGCGGTTTGT
TGGAGGATAATATAcgtttcaaaaaatggaaacagTACAGAGAAGAAGGA
ATGTGGATCATTCATCAAACCATGCAAACATTTGCATCAAGCCATCGAAA
TCTCCCATCACTCTGACATCATTCTGATGGATTCGAAGTATATTTATAAT
CAGTACAATAGCATTGTCATCCCTCGTTCGTTAAACATCTCAAGTTATTC
TGCAGAACGGCGAATAAACGATGATAGAGCCACTTTGGACTTTCTCATTC
TCATTGAAGAAAAAGCATTTTTCTACATTCACCAAAACTTTACTCTTATA
AACATTTCAATGGTGGTCAACCCCAGAAGTTTTTCTTCTCCCATTGTTTT
TGGCACAGAAAGTGaccaaaatttctcaaaagtatCAGTTATCAACTGTG
TTTTCAAACAACCAAGTAATTACATTATGATATTTTTCGGACTTTTCACA
TCATTAGATGTGGAGTTTGTAAACACAAATTTCATATCTTCTGCAACAAA
TACATGGCATGCAAGAAGAAAAGAGCGGGCTTTACACCAAAAAGATATCT
TCAGGCATTATCTTGCAAAGAGAATTACATTCCTCaaatgtatttttcaa
aattttagatgttcagGAACAGGACTAGAAAACTCCGAATGGTATTTTTG
GAACAATACTTTCAAAAAGGTGGATCTTGAAATTAGAGGGGATATGACTT
CGGTGCACTATGTAAACAATACATTTGAAGATAACTCCTATCTCGTACAA
TGGAATTCAGAAACCGCCTCACAGAAtaagacaaaagaaaatctaggAAA
AGGACGATCTACCAAAGTAGTGGATTGCAAATTTCGCAACAGTATCGCTC
GATTTAAGATTGATGGATCGCCTACTGCCAATGAGCTGCTTATATCAAAC
ACGCATTTCGAAAATTCACCTGTTACTGTCAAAGTTTACGGGGGTTTGCC
TTTGAACGTGATTGTGGAAAGCTGCTCATTCAAAGGTTCCGGAGATTACC
CATCGTCAAGCCAAGTAGAGTTCACTGCATTAAGGTCAAATACAATAATA
AAGGCTACGGTACTAAATTGCACGTTCAGAGATTCGGTTGCCGGTTCCGT
TTATTCTGACGGCTTCATCACCAACATAATTAAAACGACATTTTTGAACA
ATTCTTTAACCGACAATCGATATTTCACTAATACCAGAGCTGCCGCATTG
ACTATAACATCTTCAACATATGTGTATCTTGTCAATTGTACTTTCCTAGA
CAACAAAGCGCTACCAACTTTCTTCGACTCTATTTACATAGTAATGGCAG
GTTctagtgaaatatttttaaatatctcTAATTTGATCGTCGTATCATCA
TCAATTGTGCCAGGAGCACAGAGTAGCATATTACAGTTAAAATCAGATGG
TTTCATGTACGGCTTTCCGAAGATCCTTGATTCAAGCGTGTTTTGTGGTT
TGCCAAACTATAATGTATATGACAATATAGAGGAATTTAATCCAATTTTT
GTGCGGCTCTCATGCCACGAGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000098_pilon | genome | sc0000098_pilon:852588..856887 + |
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