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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000006_pilon:1201337..1211327+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.1280.4.p1 ID=MSTRG.1280.4.p1|Name=MSTRG.1280.4.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=9991bp|location=Sequence derived from alignment at sc0000006_pilon:1201337..1211327+ (Clytia hemisphaerica_ch_hm2_pilon) aggaaaaaataattaaaaaaacaacaaaagaaatgatAGAGCAATTACAG
AGACATGTTTTTTGTTGGTGTTTATTCATGGCGTGTTATCTCCACCACAA
CGCAGTCATCGGAAAAGTTTTCCCATCCATCATTTGGAGCCCCTACAACC
CACTGTAAGTAGCTTAAAACTTTCCGAAGGTTATTCATATGTTAGCAAAC
TTGAGTTTTTCtggtaatatgaaaatataatcTTGAAATATCATAAATCA
GATCACTTTACCtcttaaaaaacttttgttcTGAAGCAAAAACTTATGCC
TCAAACTCAAAATCTTGAAGTGTGCGATTAAACATTGAAGGTTCTCTTTA
CACTTTAAAGAAAGTCTGAGAGAACGTTCACAATATATCTTGAAACTCAt
ctagtgggggggggggacgcAAGTATGCATTATTGAATATGGACTTCAAA
AAGACACGTAATAGGTTGAAATATCGcccaaagagaaaaatttcgttAGA
TACACCTTTTGACACGTCATTCACATACGAAACATGTGATGGTGTCAATC
AAGCTGCATCTCTATAAGCATAAATGACTCCTTCAGCTCAGGCTTTTTTC
CCAACATTTCCAAGTTCGCGACAGTCACCCCAGTCtacaagaaaaattct
aaaaacgataaaagtaaCTATAGACCAATAAGTATACTGCCGgtaatatc
caaaatttacgaaagagtATATCACAATCAAATATCGGAATACTTTGAGC
ACTACTTTGATGAACAACAATGTGGTTTCAGGAAAGGATATTCCACTCAA
ACCTCTCTTCTCCCAATGGAAGAGATCTGGAAGCTAgccaatgacaaaaa
agatgtttttggggCACTGCTCATCGACCTTTCTAAGGCCTTTGACTGCA
TGTGCCACAAATTACTTGTAGCAAAGATCAGTGCATACGGGTTCGATGAC
CTTTCCACTGGGTTAGTCAAGAGTTATCTAGAAAATAGGCAACAAAGGAC
AAAAGTAGGCAACGAACTGAGTAACTGGATCAAGATCAAGGATGGTGTTC
CCCAGGGatctgtttttcaatatttatatatgtgacctctttttcatcat
tgaggaTACTAAGGTTGCGAATTATGCGGACGATACGACACCCTATGTTA
GTGCTCCTACCTGGGTTGAAGTAAGTGGTAAACTAAGCTCTGtagcagaa
aaaatcttcacatggctttcgattaatcaaatggttggtaatgctgacaa
atgtcagctaatagttaacatcattgacgactcgctctatctaaatatta
gagaagaaactgttttcaataccaaaacgtcaaagattcttggagtaacc
ttcgataatcttttgacgtttgaatcgcatatagaaaatctttgcaagaa
agctagtttgaaaataaccgccttagccagaatgagcacatatctcactt
tagaaaaaaagaaacgcttgacgaatgctttcattaaatgccacttcaat
tactgtcctctcatatggatgtttcatagcagagctctagaggataaaat
caacaatctacataaaagatgcttgagaatcgtttactcagacTACAACT
CATCATTCGATGATCTGTTGAAACTTGACAACGGTTCCACCTTCCATCAA
CAAGCAATTCAATCCTTatccacagagctatttaaatcaaaactcaatga
atcagaaagtaaaatatttctcaaaaaccaatgtaagatcaaaacgagaa
aaaggaattcctttcgtagtagagtagttgaaagtgaaatgaatggaaaa
tcgtctttagctttcctgggacctaaaatctgggctacccttcccgatga
ctttaaaaaacttaaaaacctagatgaatttaaaaaagaaatcaagcaat
ggaggcccactacttgtccttgccgaaactgtcgcacttttatccatggc
gttggtttcattgatttaatttaaattaatttgtaaataatagttgatct
tgagtatcaaccttctagatagatttgtaattaatagttgatattgatta
gcctcgagctaagtacacattgtactactttgcatcaactttaaagaaaa
gaaacataaacaacATAAACATAatcccattgagtttcaagcccgaaggg
ctaagggtgagactcctggatgggaaatgaaacaacttattttccatcca
gaacgtagtttttacacaaacgccggattgaaactaaaatctatcgctag
atttcaaaaaaatgtagtcctcaaaaacaaaggaatttctaaataaaacc
cgtcgtcatgattacggcgtgttctatgcgcgttttggatgggaaataag
tggcttcaatttctcttgcctgagaagggttaaagtctcgcctctagtcc
ttcgggcttgaaacatGTGATggtgttaatttttctttcattcttttAGA
TTTTCATGTGAAGAACCCACATTGAATGTCCGAGTTGATGACATTGTTAA
ATTCATTTGTCCATATTACGATGTTGGGTTTGTGCAACCTGAGGACAGCC
TGGACAAACCTCTTTACGAAAACATGTACTTGGTAAAGGAAGACAGAAAC
GCTTTCGATCAATGTGATGCATCAGGTTCAGGTTTGATCCCACTTTTAAA
TCTTGTAGTAGTCATTTgatcgaaaatcgaaaatctcaGTAATTCATGAT
ACataccattacaatgtcttccacggacccaacaccGGATTGGTTGCAAT
TTACGTACTGACTGATGTTACGTCACTTGCAAGCAATCAATTGTTGGGTC
TCTGATGATGTAACATCAGATGAAATTGCAATTCAATTGTGCAAAGcaag
ttttttggactttgtgtgagattgcttcattagttttttctgattttttt
gcatgtaTAAAGAGGGCAAGGTTGTCGTAACCGATTTTCCTGGAAAGttt
ttttAGCAGTAAAAAtcgtattttcttatttggggaaattcccttttgtc
atttttaaaggAAAGTGAGCATTTCTCGCGATAGGCTTGGtttttatgat
gattttttagtctgcattttcttacttttgttgtcacttttttctctttt
cttatttGCATTAgacttcaggtaggtccattcagcatgtagcttttCAA
TTCTCAGAGTGCGtcatttcatctattttgaCAGTGCCTCATTTCTCCAG
CTAAACATTAATCACAGAAGCATGGAATCAGGTTGGTCAAACGTTACTTG
ACATAGGTGTATTCATTTTTTAGCGATATAATCTCCTTCAtttttttAGG
AAGTGACGAGCAAATATTAAAATGCGATCAATTGCCATCCAGCGCAAACT
CAAACCGTCTGAGGTTTATCAAAACTCAAACCTTTCCTGGACAAATGTAT
TACGAAGAAGGGAAAAGCTACTATTTCATCGGTAAATTATCATACCAGTC
CGATTTCACATGCTTTCCTTTCTTGACTAATCTTACTGTTgttcttcaag
tattttttgataaatgtcATTGTCCTTTATCTGGCATAAGGGTATTAAAC
CTTTCTCATGTCGGTTATATTAGTGTGGTTGGGTTTGTTTGTTGACTCCT
CggttatctttttctttttattcatttcataTCTATTGGTGGTCTTTGAG
ATCTTGCAAATGAGCTCATTTGcgatattttaagattttgcggGGACTTG
TTTTCgaataaaagaattttaaaaaaaatctctgaTTATAACTTGTTACT
ATAACTTATTAATAACCtcttgatttcatttttagactAACTCACTAACA
CAACATTACTGATATATTTTCTGAGCTGATGGTAATTCTTTATAGCTGCA
AGCATGTATTGGAAGGAAGCATTGTTTGGTGAGGTTAGAAGTGTATGATT
CGTTAGATTCAATGTAGTGTCCGaattaaattgaaataattaaCAAAACT
TTATTTACATCATTTAAATTACATAGTCTTTTAGCACTACACCCAATTCC
TGAGTTTTCACCAAACCTTTGTGAAGTTAATATCAAGTAACACCTAATGA
AAAACCATtttgagaattaatttaaacTACATAATGCACCAAAGATAATA
CCTTCAATGGTGGTAGAACCTAATATTAactttaccattttacattggCG
ATTCAGGTACTGGTTATCGGACAGCTGAGAATGTGAACAACACCATTGGT
GGTAGTTGTAACACAACAGAAAATGAGTTTCAATACAAACTACGTTTGAA
AGTCTACATTTGTCGTCAAGATGAAGTGTGTAGAACGTGTAATACTGCAC
AATGTTATTCGAAAggtattttgttgtttttgctaCTACATGTGTCATTA
CACCATTGTCATGCATGAAAGCTCCAATTTTTTCGTACAACAAATAATTC
AAATCACGCATATACATTATTTCATGACCAAGTGATTGGTCTCAGTAAAG
AGATGGTTTGAGAAACCCTCTGTGGCCCTGAGTATAACTTCTGTGGTCCT
GAGTAACACCTCCAAGTATTTTTGTCAAACatttttccaaagtcgagata
tcatTAACTGAAATTTCTAAATATAGATGGGTtttacacggttcttacgt
tgaaattctattgttttcttactaAAGGTAAAAAACTTggatatctcgac
tttggaaaatagttaagGCAAAAATATTTGAGCTTTTGTTCGGGACAAGG
AATCCACAttccaaatatctcaaaccatttgACTATCTTTAAACAATATA
CATTAATCAACCCCAACACAACAAGGGATTGGTCTTTGTTTGCAAGggtc
aaatgacgtcataatgttTCATAAGTATCAATGCGAGGACTTCTGATATG
TGACGTCATTCAACCCTGGTAAACTCGAACCAAACCCTCTTTCATGCGGG
TTTTGTTGCAAGGGTTGATTGGTGTAATACTGTTaacattttgtgaaaaa
taattgtacTTTGCATGAAAATCAGTAGTGTAtcaatttgtttatatttt
gatcGTTTTTCCAATTTGGATTTATAAAAGAGGCAACTGCACTTGGCATT
TTAATAAATGCTCATTTCCAAAATAGATATTGATTGGGGCATGAATTTTA
TCAATAATCAATATACCAATATACAATATGCATTCTGCAAGAAATTATTC
AATAAACtgcaagaaaaacaaaatgatatGACAAAGATTTGACTTGACAG
CATGATCgtactaaaaattaaaaatcattaaacattaaaaaacaattttt
tgatccaaaatgtttttaGAAGCCAAGGTGAGCTCATGCATGACAATGAA
CAACAGAAAGAATCGACCACAACATGAAAATACTTTGgacgaactttttt
ttaattctcactTCTTTTAGAATGTCACTGCTCGCCTTGGGTTCGAAATG
GCTTCAATGTTACCgacgatttttcttctttatcccAAACATACCAGCGA
AGATGTAAAGCACCCAATGAAAATGCTCGCTATGAAAGTAAAACCATTGA
CAGTGTCTCGTTAAACAGTTGCACTGAATGGAAAAAGCATTCGAATGAAA
CGTGCAACTTTATGAACACGCCATCAAATATTGATTGCCCTCTACTCTTC
GTCAAAACTTGCCAATCCAGCATAGCATCTTACTCTTTTTGCAAATATGT
gcctgatttttcaaactgccattgCTCTGATTGGATTGCTAAAGAGAGAA
AAGTAGCGCCTGACTTCTCAGCTATTCATCAGATTTTCGAACGCACGTGC
TCGTCATCTTATAATAACTCAACCAGAATCGAAAGTAAAGAAACACAAAA
TGCAACCATCCATTCATGCCAGGATTGGGAGAAACCGGATGATAAGCTAG
AGATGAACTCTTGTCTTTTTATCAACAATAACACACTTGCACTGAACAGT
GCATGCGCTAGTATTGAGCTTAAAAGATGTTCATCTTCAATGCAAAACAT
CAACATATGTCGCTACATTGATAAAAAATGCCCAACTTGTACTCAATGGA
GTAAAACTTCATACTATAACATTTCTTCTGACTTGAAAgtgaaagctgaa
aattttctcagtaTTTGTCCAAACGGCACAATCAATGAAAAGTCTGAAAA
CATAAATTGTGTCTTGGATTGTTCAAGTTGGCAAAAAGTGGAACCTGACT
CTCATTGTGATCAATATGAGAATCAAAAGCCAgattgttttgaaaacaaa
cagAAACGAAGTTGTTCGTCAGTGAATTGTCAATTCAATCTTTCCATTTG
TAAATACATAGGCGTGACTTGTCCTCATTGTAACCCATGGAGTGAAATCG
AGAAAACACCTTCTGCAGACTTCACTCAATTATCTTTGAATGAGACTCGA
TGGTGTAGAGATGGAAATGACAACAAGACAGAGTTTAAACAACGAGATTG
TGATTTGCAATGTGAAGATTGGAAAGAGTTTGATGAGGAACAAGATGAAG
GCTGCATCATATTGAATGGAAATACAACAACAACACCAAAGAAAGATAAC
CAACTTTGTGGAATGACTTCTAAACGTTGCCAAAGCAACCAATGTAACAA
AGAGATCAACTTTTGTGCATTTTCTACATGTACAACCAGCAAACCAACTA
CTCGTAGTCAAAGTGGCACTCCAGAAGTTGAAAGTAATTCCCCTTGCTTT
AttcgtttattttattttgtctgATAAGTCtttttttCTGTAGAACGCTT
CGACGGTCATAACAATGTATTGGTAAAAAGTATAGAATCATACCATAAAT
AATAGAAGAAGCTGTATGTGTTTACACTCGACAGTTTTCATAAGGGTCAG
ACATTTAATGACACTATTGGTGGTCTGTAACTGCAAATAGCGATTGCCGg
tatcactttttgataaattatagAGTAGCTACTTGACTTTATCAAAACAG
TGTACGAGTCCTTACTTATTATACCTTACAAAAGGCGATTCTTCTCTTCT
TTTAGAACAAGTTGGGCCAGGTGAAGCGAAGGAGAGTAACAAATTCCTTT
ACATTTCCATTCCAATGTTTCTGGTGCTGTTTGCATTGGGTATATTGGTA
GGCATATTGGCTTTCAAGAGGTACCACCAAAAGAAATGTCTGAATTTCAT
CATGAGGCCAAACCAAGTCGACGTCGGAggtttgaatttatttatcgtta
atgatacaattttcaaattttcttacctGTTTTGCTAAGAGACTGAATGT
TCTGCAAATTTGCTCATAAGAAAAGATTTCTTCTCTGTAAGTCATTGCGG
GCAAACTGAAAGCTAACTGCCTGATCAATACTATGCAatcttcttcaatc
tttatttgTTCATTACGATACAGGTAAATTTTGCCTTCTTTTCTTTTCGA
GATCGTATGAAATgcaataaaccagccgaggctggaaggtcagccaatag
agcttagctagatagctttaataagtgggttaacagatgtaagagatgca
ctgaaacagagtagactaaatatgttgaataatgtacattgtacacagag
aacaatagaaatgactttgtttaaacaatagatgtacgcttttgctaaac
cccctctccccccttcactgtgtacgtactatatggatggcccctccagt
ctgggtaaataaattttgtagtttagtaccgtcaagttacacaacatgca
cacaaccatcttgaagactttgctggtcgcaaatgataatggaaagcaaa
acttaaaattcataactatgcggggaagctcattatttccccccgttttg
ctttaaactcgcttttgattggtctatgaatttgggcgattgatttaccg
ccttggcggaataaacacacaaccataataaataaattcaacagggcagc
ggtgtagcaattaatttcaactgggagtcctctcttctgtgccaagaact
ggcagtgttttttaaactttaaaacaatgttaaatgaagactagattgtt
tgttatggctgtgcaagttgtgacgagagtgtgcatgttgtgtaacttga
cggcagcccgctttctgaaagtctgataagagatatctataaaTTGTTAt
tgccattcattccattccattattCAGTCAAAgtgtgcgccaaggttaga
aaaggttagaaaaacacaatctgcatccggaactgcgtgaaaaatagttt
gatcaatttcaacaagaactgtatatattaatattaatataaatgatcaa
attccatAGACactttgtcataattttgcaagtccaataataggagatgt
gatgtcatcatttggttcccgtcatctgatttacggtcagcaggtagagc
tggagagtcggaaagctttaccgctgctttgctggatttccactgtcgac
ctctgcacgctctgtgtttaaaagttttcaaatcgaagtagagagccgca
tgcttatggagagtaaaccgaaaacaccagtttatccacggtttctcaat
tttaaaattcggatcagtccacacgaattccctttcaacaagatgtatag
ctgcttcttaacagaaaaatattttcgactgaccggccgaacgactccca
ctttttaaagtagaaatgacgggaaccaaacagttttttgcgattcgcct
ttatcacaaacacgtccaagtccaaaaaagcacgattgcatccagtcttt
atatcaaatttatacagtagctgtacttttgtaaactttatcaaattcct
ataacattataacaccataaatccccctagaggcaaacaagaaaaatatg
ctattattgcaaaaactattaaaaagcagcaataaaaagtatcagaaaat
tcaacataaacaaaaacttgagcaaacggctttaaaccttcaaaggatgt
agaaaaagaatccccttgatgaaaatcatgtgtttgatttgccgagttaa
aaaaataaatgacagaaattgaatcttgcaacagatttacactggaaata
ctttggtacaacactgacttatcgacttatcacatctgaatATTGCtcga
gccgccatcttgaaactacattatgatctgtataaacaacgcacgctaaa
agtacccaaaaagttaacccgatcggaagaaagtttagaaatcaaattga
gatcggaaaatcggattttttttttgccgtcttatggtggaactggaaaa
ttttacctatttgaatgctcagcttaggctgaccaattagtCATCAAAAA
ATGGATAAATAGTACATTtgaaatttgcgattttttatGTATCTTGTAAG
tcttattttcatgatttttttcacaGAAGAAAGAGGAAACGTGAATTTAG
CATATCAATCGTCAGTTATCGAGAAGCGACCAAACGCACAATCTGTTTAT
TATGCCAACGAGTCGGATAGTGTTCATTGTGACACTTTTGATGAAGAATC
GAAAAGCTGATAAAGTGTTATCGTGAATGTGCAGAATTGATGTGTGCCAG
ATTGTTTTCGTAACTTTTTGAAAGTTGTATAAATTAAGTCTTTAATTGAC
GACATTAAATTGTCAGGTCCATCGTGTATTTCATCaatcttttggaaatt
tttgatcATGGAAATAATGATAGTGACTTGACTTTGGCTCTTTCggaatc
ttttaaaaatatcaaccaaAATCTGCATAAATTGAACCTTTGTTCCTTGA
GATTTCAAACTAAGACCTTTCTAAACCTCTTTTTGTAAAATACTGCTcag
attgaattaaaaaatatttttataactaACACAATTAACTGTAAAtataa
tttcaaagaaaaattgcatGtttatttataatgattcgtattttttagtt
tttccagattttagaattgcaaaatttttatgaagattcaaatgatattg
aaaatagagaagataatttttttatgaaacctACATTTTATAGAGAAAAT
TCTCAAACAGGAAATTTAATGAATAGTTATATACATAACTGGTACCTAAT
AATATCATcgatgttttaaatatttttagaacGATTTTAAA Coding sequence (CDS) from alignment at sc0000006_pilon:1201337..1211327+ >MSTRG.1280.4.p1 ID=MSTRG.1280.4.p1|Name=MSTRG.1280.4.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1764bp|location=Sequence derived from alignment at sc0000006_pilon:1201337..1211327+ (Clytia hemisphaerica_ch_hm2_pilon) atgatAGAGCAATTACAGAGACATGTTTTTTGTTGGTGTTTATTCATGGC GTGTTATCTCCACCACAACGCAGTCATCGGAAAAGTTTTCCCATCCATCA TTTGGAGCCCCTACAACCCACTATTTTCATGTGAAGAACCCACATTGAAT GTCCGAGTTGATGACATTGTTAAATTCATTTGTCCATATTACGATGTTGG GTTTGTGCAACCTGAGGACAGCCTGGACAAACCTCTTTACGAAAACATGT ACTTGGTAAAGGAAGACAGAAACGCTTTCGATCAATGTGATGCATCAGGT TCAGGAAGTGACGAGCAAATATTAAAATGCGATCAATTGCCATCCAGCGC AAACTCAAACCGTCTGAGGTTTATCAAAACTCAAACCTTTCCTGGACAAA TGTATTACGAAGAAGGGAAAAGCTACTATTTCATCGactAAatgatAGAG CAATTACAGAGACATGTTTTTTGTTGGTGTTTATTCATGGCGTGTTATCT CCACCACAACGCAGTCATCGGAAAAGTTTTCCCATCCATCATTTGGAGCC CCTACAACCCACTATTTTCATGTGAAGAACCCACATTGAATGTCCGAGTT GATGACATTGTTAAATTCATTTGTCCATATTACGATGTTGGGTTTGTGCA ACCTGAGGACAGCCTGGACAAACCTCTTTACGAAAACATGTACTTGGTAA AGGAAGACAGAAACGCTTTCGATCAATGTGATGCATCAGGTTCAGGAAGT GACGAGCAAATATTAAAATGCGATCAATTGCCATCCAGCGCAAACTCAAA CCGTCTGAGGTTTATCAAAACTCAAACCTTTCCTGGACAAATGTATTACG AAGAAGGGAAAAGCTACTATTTCATCGactAAatgatAGAGCAATTACAG AGACATGTTTTTTGTTGGTGTTTATTCATGGCGTGTTATCTCCACCACAA CGCAGTCATCGGAAAAGTTTTCCCATCCATCATTTGGAGCCCCTACAACC CACTATTTTCATGTGAAGAACCCACATTGAATGTCCGAGTTGATGACATT GTTAAATTCATTTGTCCATATTACGATGTTGGGTTTGTGCAACCTGAGGA CAGCCTGGACAAACCTCTTTACGAAAACATGTACTTGGTAAAGGAAGACA GAAACGCTTTCGATCAATGTGATGCATCAGGTTCAGGAAGTGACGAGCAA ATATTAAAATGCGATCAATTGCCATCCAGCGCAAACTCAAACCGTCTGAG GTTTATCAAAACTCAAACCTTTCCTGGACAAATGTATTACGAAGAAGGGA AAAGCTACTATTTCATCGactAAatgatAGAGCAATTACAGAGACATGTT TTTTGTTGGTGTTTATTCATGGCGTGTTATCTCCACCACAACGCAGTCAT CGGAAAAGTTTTCCCATCCATCATTTGGAGCCCCTACAACCCACTATTTT CATGTGAAGAACCCACATTGAATGTCCGAGTTGATGACATTGTTAAATTC ATTTGTCCATATTACGATGTTGGGTTTGTGCAACCTGAGGACAGCCTGGA CAAACCTCTTTACGAAAACATGTACTTGGTAAAGGAAGACAGAAACGCTT TCGATCAATGTGATGCATCAGGTTCAGGAAGTGACGAGCAAATATTAAAA TGCGATCAATTGCCATCCAGCGCAAACTCAAACCGTCTGAGGTTTATCAA AACTCAAACCTTTCCTGGACAAATGTATTACGAAGAAGGGAAAAGCTACT ATTTCATCGactAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000006_pilon | genome | sc0000006_pilon:1201337..1211327 + |
|