MSTRG.12789.2.p1 (mRNA) -

Overview
NameMSTRG.12789.2.p1
Unique NameMSTRG.12789.2.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000098_pilon:657663..659091+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.12789.2.p1 ID=MSTRG.12789.2.p1|Name=MSTRG.12789.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1429bp|location=Sequence derived from alignment at sc0000098_pilon:657663..659091+ (Clytia hemisphaerica_ch_hm2_pilon)
tttctataaattaCTATTCACAAAGAACATATCAAGAAAAATGGATGCTG TTGAAAGAGCCTCAATCGGCTCAGTTATATCACTGGTAAGATTTTTGAAT AAATTTTTCAAATTTTGGCTTATTTCTTATAATACAAACTGATGGCTAGT GACTCTATTTATATGAGTGATTTACACAAAATTGTACTTGGACAAAGGTA CTTGTTTTGTGAGTAGGAAAACAAGTTAACAAATTGACAATTTTGTGCTG AGTATTTCAAAAATAATTTAAGCACTTAAATTTAAAGAGAATTTGCAAAA GCAAGCAATCAAGGACCTTACTAATTTCACCATACCTTTATGTGTAGTTA TTTTCCCAAAATTCCCAAAAATTTAAAAACTATTTTAAACAAAATATATC TCATGTTTTTTGAATTTTTTATTTCTTTCCAGAGAAGTGTATCTGATGCA CCTGAACCAATAAGACAGAAAAATAGACCAAAGTCTGCAATCAAATCATC TAAGAAAGGTAGTTTATACTTCCCAAAATCGTGTATTTTTAAATGTGAAA AATCACATTTGATGTAAGCAGAATTCAATAAAGATTTTTAGATAAATTTT ATTGCATGAGTTTGGTAGCTTTCCAATACGGAGTTCTTTTCCGAGAAAGA TTTTCAAGGCATTTCGAACAACCATCAGTAGTTTGGTTGATTTCATAAAA GAATTTAATAAGGCCGTTTTTGGATTTTCTATCGTTTAATTATTACTAGG TTTCGAAGTGTCAAAACTTTATCTTATCTTTAAGCGCCTCAAATACTTTG ATTGTCTGTATTGATTGTATGCATTTTAAAAGCTAACGCAGGTCATTTTC ATAACGAATAAAAAGCCAATTATTCACTTGTTTGCTTTCAAGCAACTGGA TCTCCTTATGGAACCCCATCAAAGAAAAAGAATCCTACATCTACCAAGAA AAGTGGCAGAGAAATGCTGGTCACTGCTATTCAAAGTGGAAATGGTATGT CTTGGTGATAACCttttttttGTTGACAACAAATCAAACTTTCTTCTTTT AGGGAAAGATAATTTGAAAGCAGTTTTTCGTTCTTGATATGTAAATTATA GGTCAAGTTCATTTAAATGTGATTGTGTCAACACAGTAGAGTCAGTCAAC CCTTAGTCAATTAGAACCCAGCTCTCTAAATCAAGGCTATCACTGTAAGA ATTGGTGTAAAAGCTGCCCAAGAACCCAGTTTTAGTCGATGAGAAGGTAA GAGACACgatttgatattttcatgtttaaTGTTGTATTCTCGTTTCTCAT CTTGCATCTCTCCGTCTTGCATTAGGTTTGAGTTCAGAGGGTAAGATGAC AAACACTTGGATGAACGGCCGACCGAATACAAAGAATCGAACGACAGCTA GTGAATACCTTCTTGAACAGCTCACTGCA

Coding sequence (CDS) from alignment at sc0000098_pilon:657663..659091+

>MSTRG.12789.2.p1 ID=MSTRG.12789.2.p1|Name=MSTRG.12789.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1440bp|location=Sequence derived from alignment at sc0000098_pilon:657663..659091+ (Clytia hemisphaerica_ch_hm2_pilon)
tctataaattaCTATTCACAAAGAACATATCAAGAAAAATGGATGCTGTT
GAAAGAGCCTCAATCGGCTCAGTTATATCACTGTGTATCTGATGCACCTG
AACCAATAAGACAGAAAAATAGACCAAAGTCTGCAATCAAATCATCTAAG
AAAGCAACTGGATCTCCTTATGGAACCCCATCAAAGAAAAAGAATCCTAC
ATCTACCAAGAAAAGTGGCAGAGAAATGCTGGTCACTGCTATTCAAAGTG
GAAATGGTTTGAGTTCAGAGGGTAAGATGACAAACACTTGGATGAACGGC
CGACCGAATACAAAGAATCGAACGACAGCTAGTGAATACCTTCTTGAACA
GCTCACTGCAtctataaattaCTATTCACAAAGAACATATCAAGAAAAAT
GGATGCTGTTGAAAGAGCCTCAATCGGCTCAGTTATATCACTGTGTATCT
GATGCACCTGAACCAATAAGACAGAAAAATAGACCAAAGTCTGCAATCAA
ATCATCTAAGAAAGCAACTGGATCTCCTTATGGAACCCCATCAAAGAAAA
AGAATCCTACATCTACCAAGAAAAGTGGCAGAGAAATGCTGGTCACTGCT
ATTCAAAGTGGAAATGGTTTGAGTTCAGAGGGTAAGATGACAAACACTTG
GATGAACGGCCGACCGAATACAAAGAATCGAACGACAGCTAGTGAATACC
TTCTTGAACAGCTCACTGCAtctataaattaCTATTCACAAAGAACATAT
CAAGAAAAATGGATGCTGTTGAAAGAGCCTCAATCGGCTCAGTTATATCA
CTGTGTATCTGATGCACCTGAACCAATAAGACAGAAAAATAGACCAAAGT
CTGCAATCAAATCATCTAAGAAAGCAACTGGATCTCCTTATGGAACCCCA
TCAAAGAAAAAGAATCCTACATCTACCAAGAAAAGTGGCAGAGAAATGCT
GGTCACTGCTATTCAAAGTGGAAATGGTTTGAGTTCAGAGGGTAAGATGA
CAAACACTTGGATGAACGGCCGACCGAATACAAAGAATCGAACGACAGCT
AGTGAATACCTTCTTGAACAGCTCACTGCAtctataaattaCTATTCACA
AAGAACATATCAAGAAAAATGGATGCTGTTGAAAGAGCCTCAATCGGCTC
AGTTATATCACTGTGTATCTGATGCACCTGAACCAATAAGACAGAAAAAT
AGACCAAAGTCTGCAATCAAATCATCTAAGAAAGCAACTGGATCTCCTTA
TGGAACCCCATCAAAGAAAAAGAATCCTACATCTACCAAGAAAAGTGGCA
GAGAAATGCTGGTCACTGCTATTCAAAGTGGAAATGGTTTGAGTTCAGAG
GGTAAGATGACAAACACTTGGATGAACGGCCGACCGAATACAAAGAATCG
AACGACAGCTAGTGAATACCTTCTTGAACAGCTCACTGCA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.12789MSTRG.12789Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12789.2.p1.exon1MSTRG.12789.2.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.12789.2.p1.exon2MSTRG.12789.2.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.12789.2.p1.exon3MSTRG.12789.2.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.12789.2.p1.exon4MSTRG.12789.2.p1.exon4Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12789.2.p1MSTRG.12789.2.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000098_pilongenomesc0000098_pilon:657663..659091 +