MSTRG.12787.1.p1 (mRNA) -

Overview
NameMSTRG.12787.1.p1
Unique NameMSTRG.12787.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000098_pilon:643187..644498-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.12787.1.p1 ID=MSTRG.12787.1.p1|Name=MSTRG.12787.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1312bp|location=Sequence derived from alignment at sc0000098_pilon:643187..644498- (Clytia hemisphaerica_ch_hm2_pilon)
GGTCAACTGAAAGTTCATTGATTACATTGTTTTACTTTTAATTACCTAGA AATCTAATCAGCATTTTACATTTATTTTTGGAAGGTTTCATTTCGAAGCC AAATCTAGGAAGAGATTTTTGTGTTTGTGTAAAGCTTGTATGTTTGACAC TTGTGTGCAGGCTAAGAGCAGTGGTTCTACACACGAAGGTATTAGAAGTT CCATAATATAAGATTAACAGAATATAGTGGTTACAATGTTGATATTTCTA CTGGTTTTGTTTGCAGCATTTATCATAGCCGACACTGAAGGCTACAATGG ATGTATAGGAACAGATTTGAAGATTCATCGGGCTGGAGAAACATTCGATG AAATTTACAAGCCAGAGATTAGAGAATGTTCAGGAAAATTGTGTGGTGAA AATGGTCAGATAACATTTTGGATTGAGAAAAATTGTAAAACAAAAACAAG TAACAAACGCGTTCTTAATGATTATTTGGTCATTTTGATTTCTGCTGGTT GTATTTTTGTGTTTATGTTGGTTTGCCTTGTGTTCATTTTGTATCATCGC AAATGTAGAACACCGATCAACAATGAGACCGACCACGATAAAGCTGCATT GGTGATTGGGAATCCGTACATTGTTCATGGTGCTTGAAGTGACCATAGCA ACAAAAGTCTTTATTTGAAATGGTATCGTCTATCGTTTTAAACCAAAGAA GACTTTGTTTCGCAGGTCCCGATAGGGTAAATCTTACAAACATTTTTCAT ATTTTAAATATTCAACTGTACATACTATAAACTTTAAGTGACGATTTTCA TTTTTTCATATATCAATTTATCAAGAGTACAAAGCCTTCCCCAAGAGTAC TGACCTAGCAGCTTGGAAAGAAAGAAAGTCTACGCGGGATTCAAAATTTC AGAAGAAAAAAGACCAACCAAGGAGACCAAGGAGATCATCAATTTCTTAT TTACGTATTTTCTTCCGTTGCTTTATGCATTGTTTAATAGCTCTGTCCAA TTATAGTGCCTGGTTTACTTTTCGAGTCCCAGAATAGAGGATTTTCAAAT TTCATTATCAAATGTTATTATAAGATGCCCAGAACTATACTTTTTGTGAT ATGGTTCTTCGGACTTCGAAAGTATCTGTAAAAAATCCAAAGCAGTGTAA CAACACCATCAAAAGAAAACATTAAAATGTTGTTAAAAAGTCGACTATTT TTTGTCAACTTTTGGTATTTGCCAAGGGATATTTAAATTACTCTCCATGA ATCTCTGTACTGTAATAACAATTCAGGAAATAAAAAAAGAAAAATGACAC ATTAATGTCGAT

Coding sequence (CDS) from alignment at sc0000098_pilon:643187..644498-

>MSTRG.12787.1.p1 ID=MSTRG.12787.1.p1|Name=MSTRG.12787.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=402bp|location=Sequence derived from alignment at sc0000098_pilon:643187..644498- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGATATTTCTACTGGTTTTGTTTGCAGCATTTATCATAGCCGACAC
TGAAGGCTACAATGGATGTATAGGAACAGATTTGAAGATTCATCGGGCTG
GAGAAACATTCGATGAAATTTACAAGCCAGAGATTAGAGAATGTTCAGGA
AAATTGTGTGGTGAAAATGGTCAGATAACATTTTGGATTGAGAAAAATTG
TAAAACAAAAACAAGTAACAAACGCGTTCTTAATGATTATTTGGTCATTT
TGATTTCTGCTGGTTGTATTTTTGTGTTTATGTTGGTTTGCCTTGTGTTC
ATTTTGTATCATCGCAAATGTAGAACACCGATCAACAATGAGACCGACCA
CGATAAAGCTGCATTGGTGATTGGGAATCCGTACATTGTTCATGGTGCTT
GA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.12787MSTRG.12787Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12787.1.p1MSTRG.12787.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12787.1.p1.exon2MSTRG.12787.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.12787.1.p1.exon1MSTRG.12787.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000098_pilongenomesc0000098_pilon:643187..644498 -