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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000098_pilon:495882..501061+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12777.1.p1 ID=MSTRG.12777.1.p1|Name=MSTRG.12777.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5180bp|location=Sequence derived from alignment at sc0000098_pilon:495882..501061+ (Clytia hemisphaerica_ch_hm2_pilon)
TCGACTGTTGAAATtgcattaaaataaaatttgtcgaCCGTTTTTCCTGT
TGTACCACTCTTGTTGTCACTGTATTTTCAATATAGCAACATgatgttac
acgcttttttttttataagaatggtgtaaatccatttcatcatggatatt
cttaacttttttgggaaaatcatcctaaaatattcttacagcattcttat
tacttgtgggtaattggcaatttataatttagaatgctctaaaaatgaca
ttctttgcttgaatagcaaaattccatgatggtgatattcttagcagatt
cttaattttttggccattttcatcatggacattcttataaagtgtattct
tataaaaaaaaaagcgtgtacacaaTTTGCTTGATGATCCGAAGATCCGA
CGTAAGAGAAAGCCATGGTAAGTTTGATCATGGTTTGATCCATTATCTTT
CGTTGTTTCTGAGTTTGAGACATATAGCTTTTTCTTGGATTCTTGATAAA
TTTGTTTACTGTTTATTTCATACAAAATATGACGTCGTACTTACTTATCT
GCGTGTCTTAATATTTTCTGCTAATTACTTCATAATTATGTCATTTCCAT
TAGGGGTTTTACATTGGCTGTCCTTTTAATTGTCACTAATTATTTTACCG
TAGTGAAGTGTGTAATTTTTCCTTAGGCTTATTATTATGAAAATAGTACT
CTATGAGTGAAGTCACTCTGTGTGTCTGATTTTTAACACtacctacctta
tcggccatAACTTAGTCGGctttaattattagtcggccctaattttagtc
accaagccagaatttagtcacttagtgtcgactaagttttggccgataag
gtacctaGTTTTGATAttactgtaaatttttttcatggtttGATCTATTA
TCTACGGTGGCCGAGAAgggacaaacaaaataaaaaaataaataaaaaaa
ggagaaaacaaaataaaaaaggagaaaacaaaataaaaaaagaaaaacaa
aatgaaaaagacaaagcaaaaattaaaaagttattttgtgCATGTGCGCC
TGCGTGTTCCTCGAAGAAACCAAAAGTGGCGATCTAGTTGTTTATGCTTA
TTCTAGAAACAAGATGGCAACAAGATTGCCTCGTGTGTATGGCCATTGTT
AACGTATCTCGTTATGAGAGATTGCTCATCTTTTTCTCCCTCCTCGTCTC
TATTCGTTGGGCGAAAGGGAGTCCCACAATCATTACAGAATAGATTTGCA
TTTCTTCTTGGCGTCCCACAAGATTCACAGAACATTCTAGATGAACAAGA
AAATTTACTTTCTTCTACTACTCACGCTCAACAACAATCCGCATTTCATC
ATCTTTCATTCTCTACtctatgtttttttatttgctgattttttattttg
gttttctttttttattttgttttctccttttttattttctttttttattt
tgttttttgatttttttatttcgtttgatttttttattttgttctttgat
ttttttatttcgttttgatttttttattttgtttgtcccTCCTCGGCCAC
CGTAATTATTTGTTATCTTTCGTTGTTTCTGAGTTTGAGAGACAAAGCTT
TTTCTTTGATAAATTTGTTTGCTGTTTGCTTCATACAAACTACCTACAGT
ACCTATTTTTGATATTCCTGCAACtgtaaatttcttttcttttcaaattc
aatctgttatataattttaTAAACTTATTTGgtttgaaatttcagacgaa
aattttttcatctattacGTTATGTATTGTGAGACTTGATCTATATATGA
ACTTTGCCCATCAATTGACagagttttgaatgttttagtTTCGATATATA
TTTCCATGTTTAGGTGTTGTAATTTATAtcatgttcaaagttcaaagttg
aATTTATATTTCCTTGCCTTGTTTTTGGCAGTAGATCAAATACTTATGAC
CCAGATAAACTCATTAAaagctaatttttcaaaaacaaatgaatCTTCAA
AAAGCTAGCACTCTCATGCGATGTCATATATATTCTATGAGTATTGAACA
CGTCTACTTTGATCAATAgtaatttgaaaagtttttggaaGACTGCTGTG
AGACAACTTTCTCAGTCTGTGACCTATGTTCTAAAGATgataaactttaa
aaacattCCAAGCGATGGAGAGTAATTTAATCCTTCTATAGTTAGATTAC
ACTCCATCTTAGTTTATCATTTGATATTTTACTGTTATACAACACCATGA
ACATATTTGATATCGATCCCACGTGACCTTTATTCaaacatataaaaaca
tttaaaagctTGTAGATGGCTTAACTTTTGATACATATGTACTTTTCATA
ATTTCTCTTTACTTTATAACCTCTCATATGGAGCATATTTTATATAACGC
GATGATATTCAAATTTGTCCGAGATGTTATCAATTCTGGTTATAACGCTG
CTAAAATTGTGATCGGCTACCAGTCTATATTAGTGCtggttttcggattt
ttgttaCCATTTTCCCCACTTCTGCTGTTATTGCATGCTTTGAAAACGAT
CGAGAGTCTAATCTACACAAACTATTACAATGCTTGTCTTTTGGAGAAAG
AAGATTCGCTGGATTCGGATGACCGGATTGTCTTGATTACGGTCAATGGC
AAAATTTTGTTACCGGAACTGAAGGAACTTTTCATACGGAATGTCTTGGA
TTCGCATACTGTAGATGGAGATTTCAGTTTTCCAAATGTAACCAAAACCT
TACAATGTGGATGGTGCAATAAGTATTGGTtggatgaaaaatgtttcaat
atatCTGATCACATCAAAATGGTCGGCGAGACGGATGAGATTTACACGAT
CCACGATATACCGAAATTACTGAATACTGTTCAAAAGGAACCATTTGAGA
ATATCAGTGGAATGAAACTCTCCCCGTGGTTAATCAACCTTGCCTATGTA
ACAGAAAATCGAACCGCTCTTATCTTCAAAATAAACCAATCGCTGAAAGA
TATAGAAATCATTCGCGCCCTGTTATCCGATTCGAACTACGAAGTCAAAA
CGGATGctatgaaaacaatcaaaaagcgTGAGAACATTCTCAGTGATTAT
GGGTATGTTAACTTGTTCCGTAATATCGGATTATCGGGATGGCTTATGTT
CCGATTTATATCCCAGCTTCCAAAACGAAAAAGGGGTAGCAAAGATCACA
AGGATGAGAAAAGAGTTTATTTCTGTTCTAAGAGTATGGACACTACAATT
TTTCAACAGATAGGCTACCATACTGGAGTGAGTGCACGTTACGTCATTTT
ATCATGCGTTTCCATGGCAATCgaggaaaatatttcaaagactGGTACCt
actgtttatcaaattttgaatttggaGCGCAGAGTATTTGTCAGGACTCG
ATAGCCTTACCAGCGAAGTTACCTTCTAAACCTAATAAACTTGATATCAA
AAAATACATGCAAACATTGAAACAGAGCATCAGTCTCGATCCAGCCCCCT
GTGATGTCATCTTCAATACATGCTTAAATCGATTCGCATATATTTTCATA
CCTGTTTCACTGCAATCTTTGTTATCGAGTTGCCATAGTTTCAAAATCAA
AGTTGATTTGAATTCGTTAGATATGGAGCAATATGATCATTTAGTTGGAA
ATCGCATTCAAAGTTTTTCAGTTTGGAATGAAGGGTTTGTGAGCGAACAT
TTGAGGATCATTGTGACAGACAGTATGAACTCTGTGGTTGTCAGCACTGT
CTCGCATTATTCCAAAGAAGATGCTGCATTGAAATTCTTGAAGAAATTTC
ATATGATTCGAAATCAAATCGCTAAAGAAATGGGTGTCATTGAATACATA
CGCCCGAAGTAAGCGAACTGTCTTGCATGTCCACACATTCCATCGTGCTT
GAGTGGACCTAAAGGGCTACAAACACTACATACACAGTATATTGTCGGGC
AATATATTAATAACATATTGCTgaatgccggcaatatattgaaaaggtgt
ctaCAATATAATTACCAACAATATAGGAgcattgtttacagaaagaaaat
tcgattttataatagagcacctGTTGTTTACGCCCTACATTACGGTCCAA
AAACTATTAGTCGAATATTGCTCACCAATAAATtatgtagtctaagtagc
ccttaaagTAGTAAATATGTGCCATTTAATTTTCATCATAATTTAACTTT
TAAATGTTAAATATAATTTCGTACCCACATCAACTTACACTACTGTACAT
TGATTTTGctcatagaaaaaaaaattcaaaatgcaaaATGTGAAATGTAG
ATCCTCTGTCATCTTGACCGTAGCACAAAGGAATAATGTTTTTTCTAGTT
AAagagataatcagatggtttgagatatttacaGATTACAGAAACCTTCT
GTGGTCCTTGGTAAAACGTATTTTTGGGTAATAATTTTCCAATATctaga
tatcaaaatttgaaatttttgaaaatgggttcggttcttacacggttctt
acgttgagattctattgttttcattaCACTTGTAAATCAAATATCttgat
tttggaaaatacagcacctgaccccgagaatgtagtaaaccccgaaaatg
aaggtttctcattttttagcattgtagccctaCTAGTAACGATAGTTCag
tttcataaaaaattgtttcagagcatactgttacTAGTAGTAGTACCTTT
TATTTATAGACATAGAATTTTAgcgtaaattaattttttccaaagaaaat
tggatactacccgaattgagacattttttaaataaatcttctctaaatcg
aaatctattggaattaagttatgatgtaaaacttgtttgttgtactttca
tgaaatgaaagtactacctgagagatgattgatgttgacattttgagctt
ttacgatGTGTTcaagacccgctgggaccccagcccaatcagaaaatttg
cctaagtttggaacaatagaatttctatccccattgggaccttagtagaa
atttttgtccccgctgtgggagaaagttccaccggggctgggGTGTTGTT
AGATTACtcacatattttaacacaaaattttcaaccaagaaaactttctt
gtttcaacctacaaaataaaacaactttcttgtctcttcttttcatCCTT
TAATTTGTAGCTCGATCAGGTACGATAAga Coding sequence (CDS) from alignment at sc0000098_pilon:495882..501061+ >MSTRG.12777.1.p1 ID=MSTRG.12777.1.p1|Name=MSTRG.12777.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1485bp|location=Sequence derived from alignment at sc0000098_pilon:495882..501061+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGCATATTTTATATAACGCGATGATATTCAAATTTGTCCGAGATGT
TATCAATTCTGGTTATAACGCTGCTAAAATTGTGATCGGCTACCAGTCTA
TATTAGTGCtggttttcggatttttgttaCCATTTTCCCCACTTCTGCTG
TTATTGCATGCTTTGAAAACGATCGAGAGTCTAATCTACACAAACTATTA
CAATGCTTGTCTTTTGGAGAAAGAAGATTCGCTGGATTCGGATGACCGGA
TTGTCTTGATTACGGTCAATGGCAAAATTTTGTTACCGGAACTGAAGGAA
CTTTTCATACGGAATGTCTTGGATTCGCATACTGTAGATGGAGATTTCAG
TTTTCCAAATGTAACCAAAACCTTACAATGTGGATGGTGCAATAAGTATT
GGTtggatgaaaaatgtttcaatatatCTGATCACATCAAAATGGTCGGC
GAGACGGATGAGATTTACACGATCCACGATATACCGAAATTACTGAATAC
TGTTCAAAAGGAACCATTTGAGAATATCAGTGGAATGAAACTCTCCCCGT
GGTTAATCAACCTTGCCTATGTAACAGAAAATCGAACCGCTCTTATCTTC
AAAATAAACCAATCGCTGAAAGATATAGAAATCATTCGCGCCCTGTTATC
CGATTCGAACTACGAAGTCAAAACGGATGctatgaaaacaatcaaaaagc
gTGAGAACATTCTCAGTGATTATGGGTATGTTAACTTGTTCCGTAATATC
GGATTATCGGGATGGCTTATGTTCCGATTTATATCCCAGCTTCCAAAACG
AAAAAGGGGTAGCAAAGATCACAAGGATGAGAAAAGAGTTTATTTCTGTT
CTAAGAGTATGGACACTACAATTTTTCAACAGATAGGCTACCATACTGGA
GTGAGTGCACGTTACGTCATTTTATCATGCGTTTCCATGGCAATCgagga
aaatatttcaaagactGGTACCtactgtttatcaaattttgaatttggaG
CGCAGAGTATTTGTCAGGACTCGATAGCCTTACCAGCGAAGTTACCTTCT
AAACCTAATAAACTTGATATCAAAAAATACATGCAAACATTGAAACAGAG
CATCAGTCTCGATCCAGCCCCCTGTGATGTCATCTTCAATACATGCTTAA
ATCGATTCGCATATATTTTCATACCTGTTTCACTGCAATCTTTGTTATCG
AGTTGCCATAGTTTCAAAATCAAAGTTGATTTGAATTCGTTAGATATGGA
GCAATATGATCATTTAGTTGGAAATCGCATTCAAAGTTTTTCAGTTTGGA
ATGAAGGGTTTGTGAGCGAACATTTGAGGATCATTGTGACAGACAGTATG
AACTCTGTGGTTGTCAGCACTGTCTCGCATTATTCCAAAGAAGATGCTGC
ATTGAAATTCTTGAAGAAATTTCATATGATTCGAAATCAAATCGCTAAAG
AAATGGGTGTCATTGAATACATACGCCCGAAGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000098_pilon | genome | sc0000098_pilon:495882..501061 + |
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