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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000006_pilon:1134088..1137722+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.1277.4.p1 ID=MSTRG.1277.4.p1|Name=MSTRG.1277.4.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3635bp|location=Sequence derived from alignment at sc0000006_pilon:1134088..1137722+ (Clytia hemisphaerica_ch_hm2_pilon)
AAGGACAATTTAGACTAATTCTAAAATTATTAAATGACTGATATAATGGG
TAGTGACAATTAGTATTCAAGGGTGGGTTTACGGGTGTATTCACACTGTT
GCTTGAAAGTTGCTTGATGCACGATCTccttctttgtcttttattaTCCA
ACTCTGCATGATCGTGTGATCGTGTTTCAAGCAAACTTCAAGCTTGATAC
AACGGCCTTAACGTGGGGAAGATCGATTACGTTTATAAAAGGGTTCGTAT
AAGTGACATGGAGCTTTTGTTTCGTTTATTTTCTGAATTGTTATCGACTG
GGATTAATTATCAAAGGGAGTGTTAACGGATTCTCCCCTACAGATGTAAA
TCATAAATTTGTAaggcccaaagggctagatggcgtacttttgctaaaaa
gtgtgccgtggctagtcacgtgacattacaatagaatttgagcgcttgac
caatcagaagcattgcgggttttcgaaaacaataacaacaacatttttcc
aatattcacttttttttgcctagaatggcttaaagcacgacgtCTAGCCC
TTCGCGTTTTAAAAATCTATGATTTAAACCCACCCTAAAAGGCACATATC
AGAGAGGCACAGTTCATTCATCATTTTAAGAAGCCTGTGATAGATATGTA
TGTAATGTAATCTACAAAGTGGGAAGGAATTGCTCATCATTACACaaaaa
aaGCCTTCTTCAAGTGTTCAaagtttacaatattttatccTCACTAGTAT
TTTGTTTTCTGTCAGGTGCAACAGAATGTCCAACAGAAACTTAATGgata
aacaaacaattttcttttgttgacgATAAACGTTTTTTGTCAGATATAAG
GCTTGtctgaaaaaatattgttacCTAAAGAGAGGCTTATAATGCCTCAC
CCTAGGTGCTGAAAAACAATCAGGCTGTCTAGACAGAGAAATCTTAGCAC
GATTGCGTTAGAGCTATCTTATTTTAAGCTTTATCTAATTTTAGTTCTAA
CCGATACAAAACAATCTCATTGtagaaaaattatcagaaaagtCACCCGG
CTCAATCATTCAAGCTAGAAATTCGACTGGTGAAAAGAAAATGATGAGAT
CGTACATTGCAATATGTTTCTTGTTTGGTTTAACAAGCGCTTTCATATTT
GGAAAGAAAGACCCAGGTAATACACAAGTACTGCCAGATTTCTGAAGCTA
ACTTCTTTTCtcttaattcaaatttttccttcTTCTTCGGAAGTGAGACA
GAGAAGACATGCTCTAATGCAATCAAAAGTAAAGCACGTATTCAACAGGT
CTATTGAGGGTTAGGCTGCTTGTATCCTCTAACGAATTCGTGCTTCTTAT
TATATGCTtctatactacctgcggttttgtagaggtctgcgattcgaGAC
GCCTTGGAGTTTTtgcaagatacttcactaattggtcatttaaagtgata
gagatgacgcgttctttagaaaaagtaataagatttttttattacatctt
atcgaccaaccaaatcaaataagagcttgtaaaaactccagcttttccct
gcgattcagactaattgAGGGTGGGTTGAAAGTCATATTATAATGCCCTG
AATTCAACTAGAAATATGCTAACTAACTGTCGGCTTCTGTCATCtttttt
tGTAGTTTATCCTGACTGGGATGCATTGAGCATCACATTTGGAAAATTCA
CCAGTCTTCCACAAACAGAAGATGAAGCCGTTAGCTCTGGAGAATGGACG
CCTTATGGCGGTTGTGGATGCAAGAATGGTACGTGAGTGTAGACCAGGGT
GTATAAAATGGGCGTAATTATACATGGCGTAAATTTTGATTACCCTCACT
AGCGGGTGTGTGGGGTCTTATTGGTGGGCTTTCATCAAAAgccaaaatat
tttcgaaaattaatacaataatgGAAGTCCTTTTAAGACACGCCAGGGAA
GAGGAGGTttgatgaaatgaaagaattagGTCTTCTTGCAGCCAAAAAAT
GCTtataaattctttattttttttagcgaCGAAACCATACCAAGGTAAAC
GATACAGAGGACCTGGAGGGACCAACAACCTTTTATTTGGTCCACATAAA
AATGTGGTTGGCATTCAAATTGTATTACCTGATAACTTCAACATTGCAAA
AAACTGGAAAGGAGCTCACGTTAAAGAAGGCAACACCTTCGTTATGACCA
CATATTTTACTGACCCGGATTTAATCTGCTCCGGAAAACGAATCGCACCA
AAAGGTTATGTTGGAGATAATCTTTATATTGTGATGAACAACGGACCTGT
CAAAATCCCGTTGAAAGAATCAGATATTGGAGCCACCAAATGGACCAAAG
GAAAATGCTTCTACGGAATGGGTTAGTAAGATGGACCTAGAGTCGAGACT
TTACGAGAATAGTccaatatcttaaaatttctcaaatgaCTGGAATTTTA
GAAATAGTTTTTCCTAGAAATAGTGTCTATAATTTTCACGAGGTTCACAG
CCTGCTGACTCGGTTATCTATAAACTAAACAGTGGACTTGAACCGAATCG
AGCTTTCTTTCCACAACTGGAATCGAAAATATCTTGCAAGTTCTTATTCG
AACTGTAAGATCTTGCGAGCTCTTATTCGAACTTGTAAGATCTTGCGAGT
TCTTATTCGAACGTCTAAGATCTTATCAAAATCTTatcaactttttcttt
cttgaatcATGTTAAACTAGGCCAATCTTGTTAGCTTTCTTACCGTAATT
TTCTGAAACTAAAATGGCTGTATAACATTATGATAAGGTCTTGGGCGTTC
TTATTCGAACTTGTAAGCTCTTGCGAGTTGTAAACGTGCAAGATCTTGCA
GGTTCTAGCAAGAAACTTTAAATAAGAACTTACAGGATCTTGTAAACTCT
TATAAGAtcttgacaatttttttgaccAGCAGAAATTGAAGGTACTTGCT
ACTACTTCAGGTTTGTTAGGTCAAtcgtaaataaataaaataactgctcg
aaatttttttcgaaacgTTTTTTCTAGGTCAACATTACTGGTATGACGTC
TCCAAGGATATGGACTGTAATGATTTCGCGCGCCTTGGTTTTTGTTgtat
aatggtggaaatttgaaTGCTTTCGGATTCGCAGATTTCGGTTTATTGGA
GAACAGTCGAGTGGAAAACCCACCTCAATTTGCCATTCCTGTAAGTGCAT
TATATTagccctttttctgaaaaaaattatgagtcaatgtttttctttca
atgaaatcaagataacttttgattgaaatttcaaGGTTGAGTATTTTTGA
AGTTTGTTCCCTTCTCCAACAATGAATGATTACTTAGAAGTTGTTTTTCC
TTCGTAAACATTTGTTAGAGATGTTAAGTTAATAACAAGAAGCTGTATAA
GCTTTTAATATAAGTTAATATTAGTCACCGTCCTTAGTAAATGAGCGAAA
TGGGACagataatttaattttaaatgtcataaattttttttgtttcagct
cTTCTTTCAAGAGAAGCCAGTTTGTCTGGAGAGGAAACCTCATGACCTCA
TGACCACACAAcatattttccttcaaagaagACCTTATTTCAACTATTGT
TAAATTGAAAGATATAACCATGTGTTCGTTTAAAA Coding sequence (CDS) from alignment at sc0000006_pilon:1134088..1137722+ >MSTRG.1277.4.p1 ID=MSTRG.1277.4.p1|Name=MSTRG.1277.4.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2532bp|location=Sequence derived from alignment at sc0000006_pilon:1134088..1137722+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGAGATCGTACATTGCAATATGTTTCTTGTTTGGTTTAACAAGCGC
TTTCATATTTGGAAAGAAAGACCCAGTTTATCCTGACTGGGATGCATTGA
GCATCACATTTGGAAAATTCACCAGTCTTCCACAAACAGAAGATGAAGCC
GTTAGCTCTGGAGAATGGACGCCTTATGGCGGTTGTGGATGCAAGAATGc
gaCGAAACCATACCAAGGTAAACGATACAGAGGACCTGGAGGGACCAACA
ACCTTTTATTTGGTCCACATAAAAATGTGGTTGGCATTCAAATTGTATTA
CCTGATAACTTCAACATTGCAAAAAACTGGAAAGGAGCTCACGTTAAAGA
AGGCAACACCTTCGTTATGACCACATATTTTACTGACCCGGATTTAATCT
GCTCCGGAAAACGAATCGCACCAAAAGGTTATGTTGGAGATAATCTTTAT
ATTGTGATGAACAACGGACCTGTCAAAATCCCGTTGAAAGAATCAGATAT
TGGAGCCACCAAATGGACCAAAGGAAAATGCTTCTACGGAATGGGTCAAC
ATTACTGGTATGACGTCTCCAAGGATATGGACTGTAATGATTTCGCGCGC
CTTGGTTTTTGTTgtataatggtggaaatttgaATGATGAGATCGTACAT
TGCAATATGTTTCTTGTTTGGTTTAACAAGCGCTTTCATATTTGGAAAGA
AAGACCCAGTTTATCCTGACTGGGATGCATTGAGCATCACATTTGGAAAA
TTCACCAGTCTTCCACAAACAGAAGATGAAGCCGTTAGCTCTGGAGAATG
GACGCCTTATGGCGGTTGTGGATGCAAGAATGcgaCGAAACCATACCAAG
GTAAACGATACAGAGGACCTGGAGGGACCAACAACCTTTTATTTGGTCCA
CATAAAAATGTGGTTGGCATTCAAATTGTATTACCTGATAACTTCAACAT
TGCAAAAAACTGGAAAGGAGCTCACGTTAAAGAAGGCAACACCTTCGTTA
TGACCACATATTTTACTGACCCGGATTTAATCTGCTCCGGAAAACGAATC
GCACCAAAAGGTTATGTTGGAGATAATCTTTATATTGTGATGAACAACGG
ACCTGTCAAAATCCCGTTGAAAGAATCAGATATTGGAGCCACCAAATGGA
CCAAAGGAAAATGCTTCTACGGAATGGGTCAACATTACTGGTATGACGTC
TCCAAGGATATGGACTGTAATGATTTCGCGCGCCTTGGTTTTTGTTgtat
aatggtggaaatttgaATGATGAGATCGTACATTGCAATATGTTTCTTGT
TTGGTTTAACAAGCGCTTTCATATTTGGAAAGAAAGACCCAGTTTATCCT
GACTGGGATGCATTGAGCATCACATTTGGAAAATTCACCAGTCTTCCACA
AACAGAAGATGAAGCCGTTAGCTCTGGAGAATGGACGCCTTATGGCGGTT
GTGGATGCAAGAATGcgaCGAAACCATACCAAGGTAAACGATACAGAGGA
CCTGGAGGGACCAACAACCTTTTATTTGGTCCACATAAAAATGTGGTTGG
CATTCAAATTGTATTACCTGATAACTTCAACATTGCAAAAAACTGGAAAG
GAGCTCACGTTAAAGAAGGCAACACCTTCGTTATGACCACATATTTTACT
GACCCGGATTTAATCTGCTCCGGAAAACGAATCGCACCAAAAGGTTATGT
TGGAGATAATCTTTATATTGTGATGAACAACGGACCTGTCAAAATCCCGT
TGAAAGAATCAGATATTGGAGCCACCAAATGGACCAAAGGAAAATGCTTC
TACGGAATGGGTCAACATTACTGGTATGACGTCTCCAAGGATATGGACTG
TAATGATTTCGCGCGCCTTGGTTTTTGTTgtataatggtggaaatttgaA
TGATGAGATCGTACATTGCAATATGTTTCTTGTTTGGTTTAACAAGCGCT
TTCATATTTGGAAAGAAAGACCCAGTTTATCCTGACTGGGATGCATTGAG
CATCACATTTGGAAAATTCACCAGTCTTCCACAAACAGAAGATGAAGCCG
TTAGCTCTGGAGAATGGACGCCTTATGGCGGTTGTGGATGCAAGAATGcg
aCGAAACCATACCAAGGTAAACGATACAGAGGACCTGGAGGGACCAACAA
CCTTTTATTTGGTCCACATAAAAATGTGGTTGGCATTCAAATTGTATTAC
CTGATAACTTCAACATTGCAAAAAACTGGAAAGGAGCTCACGTTAAAGAA
GGCAACACCTTCGTTATGACCACATATTTTACTGACCCGGATTTAATCTG
CTCCGGAAAACGAATCGCACCAAAAGGTTATGTTGGAGATAATCTTTATA
TTGTGATGAACAACGGACCTGTCAAAATCCCGTTGAAAGAATCAGATATT
GGAGCCACCAAATGGACCAAAGGAAAATGCTTCTACGGAATGGGTCAACA
TTACTGGTATGACGTCTCCAAGGATATGGACTGTAATGATTTCGCGCGCC
TTGGTTTTTGTTgtataatggtggaaatttga
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000006_pilon | genome | sc0000006_pilon:1134088..1137722 + |
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