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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000098_pilon:238894..243805- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12762.1.p1 ID=MSTRG.12762.1.p1|Name=MSTRG.12762.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4912bp|location=Sequence derived from alignment at sc0000098_pilon:238894..243805- (Clytia hemisphaerica_ch_hm2_pilon)
GAATAGTTTGTCTAACAGAAAATGTATAACATGTCATAGTTTTGTTGGTT
ACATCAGTCAGAAAACACATTTTAAACACGGCAATTATGAAAAATTCACT
ATGGTCAGAGCCCTTAAGTTTAACACAAGCTAAGTTTAGGTGAAATTTAT
AGCATTCCCGCGTGCATCAGCTTTGATTACCTGATCATCTTCTAAAGAAG
ATAGCCGTTTAAATTTTCGATCTTTTTGATCCAATCTTCGAACGACGAGA
AGCTCATTGTAAAGTTGGTTCATGTGAATGTGAATAAACTCAAATGATGA
AAATCCAAACTGACGTCACAATCAACAAAAAGAAGTCATTATATTGCTCT
CGAACGTTACACAAATAACATCGATCGCAACATCGCAACTTCACTCAACA
ACAGCAAATACATCTGCCAAAAGGAAGAGATTTCCCTCTCCGTATTTTAA
ACTAACTGAAACCTTCTTTTTCTGTTGTGGATTCACCACATACATAATGG
GCCGCGTCGATCGAGCGGAGGTCGGCAATCGACGTTCGAATTACGGATTG
AAAACATACACTCCTGAAGAAACTAAAAACCAATGGAAAGAAACAGTAAA
GGTAAGAATTATCATAATTTCAATAGAATCACTGTCAAGTATCTTTTTCT
GTCAAATAAGAGCTCGCCCTTTTGAGACAAAATCTAAGTATCATTGTGGC
TGGTCAGTACATCAGCGTTGTAGCTTGACCAAGACTGGGAGGGATTTTTC
AGGTCCAACCTGCTTGCCAAGAGTAGGAAAAAATACGGACGAAAGTTTCT
AAAAGACTGCTATGTGTGGGTTGATGAATGAACGTCTAAATAAGGCCTTG
ACGGCCCGACATCTTATAAAAGGATCTTTCAGTACCCAATACCTTTGCCC
CCCAAAAAAGAACCAACCGCTGGGGCATTGAAGTTGCAGGCTTTTGTGGT
GTCACTACACAAAAAATTGAATTTTCTGGTTTATTTTAAAGTAAATCCTG
ATAACTTTGTAATTTCCCTTCCGTTTCAGAGACAAGTAGAAATTCACAGG
AATCATAATTGTGCAGCTAACGAACGAAGACGAATTGAAAAAATCAAAAA
TGGCGAATACGTTCCTACTAGCTACTTCAATAACAATAAACAAGTGAGAA
TTCCTTCGTATTCATTGTTTTGTACTTTTGTGTTGTAAGGACCGTTTGAA
TAAGGGGCAAATAAGGTCTGGACGGCCAAAGAACTTATAGTATCAAAGGA
CACTTTCAGTATATCATTCCCTTTTGCTGCCCGTTCCCGTTCAAGTAGAC
TGCCGCTGATCTCTTCCCGACGTTGACCTCGGAAAACTGAGAGGTTTCTG
GAGGTTTCGTTTATCAAATTGTGAAGAGCATGATATGCAGGAGAAAGTTT
TGGGAAAAAACTTACCACTTTTCCAATCTTTCACACTTTTACAACTTTCC
TAACCAAAACTTTGTAAATGTTTGTAAAAGTGGAGAATTTTCCATGGTTG
CAACACGAAAGCTAGCCTGGATATCCAGACCGTAAACTATTTCACCGTCT
AGTTTTTTATAATCTTGTCTCTGGTTTACGGTCTGGTCGAAGTAACTCGT
CTGCAGGGATATCTGTTCCTGCATATGCGAGTGTCTCTAATTGGTCAGTA
CGCGCCCAGTCACTGAGCAGAATTTTTGCGGGGTTTTTGATATTTTTCGA
TGCGCGCGCATAATTTATGGAAAAAGCTGACCTTGCAAAAAAAGATAAAC
AAATGAAAAAGAAAACACAAGTTCATTTCTAAACAAAATGGCCGCTGGAA
AAAGGAGCCTTTATGAATGTGGCTGATGCTTTGATGTACTTTAAAGTGGT
TTTGAAAGTTTATTGAGTTAAAAGAGGTTTTATGGTAAGTAATTATGTGT
GTCTGCCTGGGTTTCCAAAGTTTTGAGATTCTGTCAACAAGGGTTTACTC
ACAGACTGTGTCATTCAAAACTGTACCCAACTTTTTTAGTTGCACCAGAC
TTGCAATTTTAGAAACTTTGTATGTTGAGGTAAGAGTTTTTTTTTCTGAA
ATTTTGAGTCTGGATACCCAGGCTACACGAAAGCACGAAATAGAAAATAT
TTGCTTAATTCTTTTTAAGTAAAAGTGACCTTTGAAAATCGTAATTTATG
CCCGCTATAATTTATTCTTTCATGAAATCGAAAGTGAAAGTTCTTTATTC
AATTGCTATTGGAGGATGATACGCATAATTTTCAGCCGAGTCTGGAATAA
TTATGACATCATAGATCCAATTTTCCCACCAAAATACCAAAACTTTGCAT
ATGCAAATGATTGCTGTTGTTGGCTGGGAAAGTTTGGAAAAGTCCTTTTT
TTCACATCTTCACAACTTTCAAGGAACCTCTTTTGAGGTGGGAAAAATAG
TAAGATATTTTACAACTTTTATGGTTTTTACAACTTTTTTAGACCAAAAC
TTTGACTTTTTGATGGGAAAAGTGGGAGAATTAGCAAATTTATGTACCAA
AACTTTCTCCTGTTGTTGATGGAAATAAGGACTCTTTGGGGGAAGCGAAC
TGGTCAAGTTAGGGGTAAACAGTTTCGCGTGTTTGTTTTATATCGTGTAA
GCAGTTAGAAAAATTTGGGACTAAAAAAGGTTGAAAGGAATCCTTTACTT
TCGCATCGACTTCTTGAGGGATTACTAAAGGACTAGAAGGGTCTTTTTTT
TTTACTTTAACTAAAATTCCGAGTTATAGTTGACGCTTTTAAATTCGATA
TTCCACTATTCAATACGCTCCCTGATGACAATCTAGTTTGAAAATCGGAT
TGGAGAGCGTCAACTGTAGATTCGACGGTTATTATTTGAGGAATGGTTTG
ATCTTTGATTGTCAACATTTTTTCTTTTAGCACAAAACACCATCCGCTTA
CGACCGCCAGTTTCACATGGAAGAAGGATGTTATAGCAGATTGAAAAGAG
ATGATCGGATGGCTAGTCTAGGTCTTGATATTAATGCAGAGGTATAATTA
GTTATTTTCTCTTAAGATTGGCAGCTGTTGTAGACCACCAAATATACCTC
ACGTTGGTTTTCCACATAACACGTAAACTCACGTTGGTGAAAGCAAATTT
GTTAAAGTTTTGGAGAGTTCTAGTCACTAAGGCGTGTTCATCTATTGTTT
GAGCGACAGCAAGAGACCTGCATTTAGTCGAAAGATTTTACGGCATTAAC
TTGCGTGAGGCATAAAAATTAATAAAATCAAAATTTTGAAACGAAACGAA
TTTCGTACTTTTCGCGATTTTTCAACCATGTTGAAAAACGACGCCCGGTT
GACGCCCGCGATTAAACCACCTAATTGAAAAATGACGCCCGCCACCATTC
CCCTTGTTTAAGTTCCATGAAACTCGTGATACCCTGGATGACGCTAACAT
CCATTATGATCTAGTAACACACAATAGCGAGTTTATGTATGTGTGTCTTT
GTGTGACAGAGACTGTTAGCTTTTGATTTTTCTAGACTGAGGAAGACGGT
AAATTAACACTTTTATTTTAACCGAAAAATTGCGGTTTGTTCCTAATCGT
TTCAGTCACATCGTTGTCCACAAAAATACATAAACTCTAATGACATATTC
CCTGATAAGGTAGTGAAATGTTTTTTGAATATTTGTTTTCTATAGAAGGT
AACGTAGCTTTTGAATGTTTTGTTCTTCATAGAACGAGAATACGATCCAA
GAAATAGACTTAGACTTGTCCTTGTACCGCTTCAAAGTCAACAAAATTAT
GAACGCACCATCATCTAATACGGTGAGCAGATGGCTTCACATTCTCTCAT
TAGATAATTCGTTTTGAAAGTTGGGTAAACTACCTTATCGGGGGAAATGT
TCTGAGTTGAAATGACTACAATGTTTTCGGCCTTACAAGTTCGTCCATGC
TTACTTCTATTCTTGCTCGTTTTCCCCGGTAAGGTGAATTATCTTGATTA
AATCACCGTCATCTTGTAGAAAAAACATTAGATAGAGCTTCCTAATCTTT
CCTCTACAGGAGTTAAGGAGCATAATAATAATCATGTGTCATTCTTTTAA
TGAGGCCCCCAGCGGACCTTCAATTCACGCAATCACGCAATTCTTTTTCG
AAATTAACGCATTCACGCAAATTCACCAGTTTCACGTGAATAACCCGATT
TCACGCTCAAAATAGCCCAGATTTTTCACGTTTTTTACGTTCACGCAAGT
TTTTTCAATTCACTCATTCACGCTACTTTTTTTTCAATTTTCACGTATTC
ACGCAACCGAGTATGCCCATTCACGCAATCACGTAAACCGCTGGGGGCCT
TTAATAGTGGACCTTATTGCATGCCGTTAGGCTTAAGCAGACACAATCTA
GAAATATAATCAGAGATGATGCAAGATTTCACTTCACTGAGATAGGGTGC
TCTTTCTAGTGTTTCTATGAGAGACACATTGGTAGCTCTGAGGGAGGGGA
GGCGAGTGCATTTGAATCTTTACTTGACCGATCTGCCTCTGACACAACTA
TATTTACTCAATTGTTGTACAGTTTACGCTCTCTAATTCGATTGTCAAAG
GGAATTGGATTTTCATCGAAAAAGGGAGCGTATCGAATAGTAAAATGTTG
ATGCTTACATACGCCTGACAATTTGACGCAGAGTCCATGTAGAGTGCTGA
CGCTGCCAATAGTATATTCAAAATGATTTTTTTTTCTTTTCAGGAGAGTA
ACAAGTGTGTACCCATCCTCTCTTCTTCTTCATATGGTCATCGTGTACCC
TTAGAAAAACCGGCACGCAAGAACTGTCGTGTCGCACTCGTGCAACGTGA
CTTTTATCGCGATTCAGGTACCAATATACCATCTAACGACCAATAAATAA
ACATTATATCAAATTTAAACATAACTATCCTGATTCTTAGAAATATAACA
TTATTAAAAAAA Coding sequence (CDS) from alignment at sc0000098_pilon:238894..243805- >MSTRG.12762.1.p1 ID=MSTRG.12762.1.p1|Name=MSTRG.12762.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1932bp|location=Sequence derived from alignment at sc0000098_pilon:238894..243805- (Clytia hemisphaerica_ch_hm2_pilon)
GAGAGTAACAAGTGTGTACCCATCCTCTCTTCTTCTTCATATGGTCATCG
TGTACCCTTAGAAAAACCGGCACGCAAGAACTGTCGTGTCGCACTCGTGC
AACGTGACTTTTATCGCGATTCAGGTACCAATATACCATCTAACGACCAA
TAACACAAAACACCATCCGCTTACGACCGCCAGTTTCACATGGAAGAAGG
ATGTTATAGCAGATTGAAAAGAGATGATCGGATGGCTAGTCTAGGTCTTG
ATATTAATGCAGAGAGACAAGTAGAAATTCACAGGAATCATAATTGTGCA
GCTAACGAACGAAGACGAATTGAAAAAATCAAAAATGGCGAATACGTTCC
TACTAGCTACTTCAATAACAATAAACAAATGGGCCGCGTCGATCGAGCGG
AGGTCGGCAATCGACGTTCGAATTACGGATTGAAAACATACACTCCTGAA
GAAACTAAAAACCAATGGAAAGAAACAGTAAAGGAGAGTAACAAGTGTGT
ACCCATCCTCTCTTCTTCTTCATATGGTCATCGTGTACCCTTAGAAAAAC
CGGCACGCAAGAACTGTCGTGTCGCACTCGTGCAACGTGACTTTTATCGC
GATTCAGGTACCAATATACCATCTAACGACCAATAACACAAAACACCATC
CGCTTACGACCGCCAGTTTCACATGGAAGAAGGATGTTATAGCAGATTGA
AAAGAGATGATCGGATGGCTAGTCTAGGTCTTGATATTAATGCAGAGAGA
CAAGTAGAAATTCACAGGAATCATAATTGTGCAGCTAACGAACGAAGACG
AATTGAAAAAATCAAAAATGGCGAATACGTTCCTACTAGCTACTTCAATA
ACAATAAACAAATGGGCCGCGTCGATCGAGCGGAGGTCGGCAATCGACGT
TCGAATTACGGATTGAAAACATACACTCCTGAAGAAACTAAAAACCAATG
GAAAGAAACAGTAAAGGAGAGTAACAAGTGTGTACCCATCCTCTCTTCTT
CTTCATATGGTCATCGTGTACCCTTAGAAAAACCGGCACGCAAGAACTGT
CGTGTCGCACTCGTGCAACGTGACTTTTATCGCGATTCAGGTACCAATAT
ACCATCTAACGACCAATAACACAAAACACCATCCGCTTACGACCGCCAGT
TTCACATGGAAGAAGGATGTTATAGCAGATTGAAAAGAGATGATCGGATG
GCTAGTCTAGGTCTTGATATTAATGCAGAGAGACAAGTAGAAATTCACAG
GAATCATAATTGTGCAGCTAACGAACGAAGACGAATTGAAAAAATCAAAA
ATGGCGAATACGTTCCTACTAGCTACTTCAATAACAATAAACAAATGGGC
CGCGTCGATCGAGCGGAGGTCGGCAATCGACGTTCGAATTACGGATTGAA
AACATACACTCCTGAAGAAACTAAAAACCAATGGAAAGAAACAGTAAAGG
AGAGTAACAAGTGTGTACCCATCCTCTCTTCTTCTTCATATGGTCATCGT
GTACCCTTAGAAAAACCGGCACGCAAGAACTGTCGTGTCGCACTCGTGCA
ACGTGACTTTTATCGCGATTCAGGTACCAATATACCATCTAACGACCAAT
AACACAAAACACCATCCGCTTACGACCGCCAGTTTCACATGGAAGAAGGA
TGTTATAGCAGATTGAAAAGAGATGATCGGATGGCTAGTCTAGGTCTTGA
TATTAATGCAGAGAGACAAGTAGAAATTCACAGGAATCATAATTGTGCAG
CTAACGAACGAAGACGAATTGAAAAAATCAAAAATGGCGAATACGTTCCT
ACTAGCTACTTCAATAACAATAAACAAATGGGCCGCGTCGATCGAGCGGA
GGTCGGCAATCGACGTTCGAATTACGGATTGAAAACATACACTCCTGAAG
AAACTAAAAACCAATGGAAAGAAACAGTAAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000098_pilon | genome | sc0000098_pilon:238894..243805 - |
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