|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000098_pilon:207269..214077- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12760.2.p1 ID=MSTRG.12760.2.p1|Name=MSTRG.12760.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6809bp|location=Sequence derived from alignment at sc0000098_pilon:207269..214077- (Clytia hemisphaerica_ch_hm2_pilon)
GATCCGTTGATCCGTCTGATGTTTAAAATGTTAAAACGGACAAAAACACA
TGCAAGGGTATCCCAATGGAGCTTGATGACGTCAGTTGTGCTTCTTACAC
GGGCGATTAGCCGTATTTCGAACCCCTACAACCCCCCCCCCTTCTAAGCC
TAGTTTAGCTAATGAGTTTTGAGGATTTAACTTTATTTGTAAAATATGTC
TGCCTTTTTGGGACACACTGCATGTTTAATTTCGTAAATATCACACCAAA
ATCTTCCACGCTTCCACTTTTCATCAAGCGTATTTCTTAGCCTGGTTAAC
CAAGCCAGTTTTTACAAGGCTAAGATACGGCTGAAGACAAATGAAAAACT
GGCTTGGGCGAAGCGCGCGTTCATATTTTGAACGCAGAAGTCGGTGAGAC
TCGGTAAGCATTTGGCCTCTTCTAATTGGTCATAATAGACCATGTGATAA
GAAACGAAATTTTTCGTTTGTTTTGAAAACGCTTTTCACTTCTCAACGAA
AGACTTTTTGAATATATTTTATTCTGTACTTTTTGCATAAAAAGAAAGAT
ATATTTTTCTCTCTCCCTCTTTTAATTTGAAAAACCTTTATATAAATGAA
TGAAAGAGAAATTGAGTAAATATGGAGGAGGGTGTATTTATTTAACAAAT
TCCTTATTTTTATATTTTTGCTTTTTTTATGTGAATGAGTTATGGGAAAT
CTTTTGTTGAAAAATATGTGTTGAACAAATTATACAAATTTATGTGCGTT
TACAAAAACGTGCCCGGGAAAATTTGAAATTTCGTTTTTGTCAGTTGATA
AGAAACCGAGTTTACTTGTACTAAGCCAGATATTCAGTCACAACTTACCT
TCAGATTTTACTAAGTGACTGAATCAATCTGGCTTAGATTTCTAGGCTAC
GTATTTCTGTGAGAATTCTTTTTGATAATATTTAGTATCTGTTAAATTAT
CAACAACATCACACAAAAAAGAAATTCACACATTTCTATTTCTTTCATAT
TCAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGACAAACTTTTCACTT
CATACTTTCTGTACTTGGGTTTTTTTTCAGAGGAAAATCGAAAGAAAAAT
GGCGTGGTATAATATCAGTAAAAGCATGATTCCTTGTAAAATTGCATATT
TCTTGTTCATTGCAAAAGATTTAACAATTCGCATGAACTTAGTATTATTT
CTGTTGAGTATCGGTTTATCGAAAAGTCAAGCTGGATTAATTGTTGGCTT
ACGGTTGGTCAGCGTTGTTGGGTTTTCTCCGTTCATCGGAATGATATCGG
ATAAATATCGGGTTCATCGTCTGACGATTGTGCTTTGTTCCATTATCACT
TTCATTTTCAACGCCATGCAGCCTTTCCTTGCGTTGAAGTTCGGTTCCAA
AACATTTCTGTATTGCTCAGCTGGAAGTGAAGAGAACCGAAACTCGACAA
CATCACACCTGAACACGACCTCGTCATTCAGTACAGAATCTCACACTAGT
ACTAGTCCTCCTGACCAACAAGTTTTGTTCTGGATGATGTTTGCTGTCAA
TTTGATCCAATCGCTATTCGATGGCTCCTTAGATGCTTTTATAGATACTG
GAGTCATGTTACGTATCAAACAATCCAACGAAAATGGCGAGAAAAATAAG
TATGGACATCAACGGATCTTTGGTGTTCTCGGTCAATTGGTTTGTCCAAT
CATCGGGAATTATTCGATCGCATTATTCCCGAGTGATCACGTGACTTGTT
ATACCGGTGTGTTCATTTTATACGGATTTCTTTCCATTTGTTATATGCTA
ACCTTGCTTTGGTTGTTTCAAGGACTGAAGATGGAGGTTCACGATTTGAT
GGATAGCGAAGAAGAAGCACCACTTGAGCAGAAAGGAGAAAAAGAAAAGC
TTGAACAACAACCGTTCCGGACAGTTTTATTTCGGACACTTTTTGAGGAT
GAGATGTTAGTCATGGTATTGACGTTATTTGGTATCGGTTGTTTAATGTC
CGAATTTCTTTATTACAGTTTTCCATACCTTAAAGATCTGAACGCAACTA
CCATGGACTTGAACTTATACCTCATTATTCTTACTGTTGGAAACTTCATT
GGTTTTCTGATCATCCCGAAGCTGGTGCGTCTCGTGAAAGGTCCATTCCC
CACCATATTTATATTGCTGATCGTGTTAGTGTTGCGGTTCAGCCTGGTGG
CTGCTTTCAATGACCCGAAAATAATCAGCATTGTTCAGATTCTCTCGATT
TTCGATTTTCCAATTACAGAGACGGTGGGTTTGGAGTTTGTTTTAAAGAA
ATCTCCGAAGCGTGTTCTTACAAGTATGTATGGAATCATCAATGCTGTTC
AATATTCACTTCCCGAATGTGTGGGCAACACCCTAGGTGGATATATCTAT
GAAAAGTTTGGTGCTAAAGTGTTGTTTTATGGTTGCTCAGTGGTCGCTGC
TACACTCTCCCTCACCCTTGTTTTATGGATTGTCAAAAGACGGATTCAAG
AGTCCAAACAAGTTCGAGAAAAAAATGGACAAGAATTAACTCTTGTTGAA
AAGTCGTAGAATTAAATCAAAATATTTCCTTAAATTGCAATTTCTGGTCG
GAATTAACACTTGTTGAAAAGTAGTAGACACTTTGATTTTCTTATTTCTG
TTAGGTTTATTTTAACCATTTTAAACCAAATTTGGTTCCTATTTTATTCA
TTCTTTATACCAGGTATACCGGGAATGAAGACCACTTGAGACTCAAAGGG
TCGCTGTTTATCAAAGACTTTGGAGGGCTTAATGTTTTCTACTAAGGAAT
TCAGACTGCGAGTGACGAGTTAGACCAAAAATGGCTATTTATAACTCAAA
CCGGGCATTACAGGAGAGCTTCACCCTCCTACATAGCCCATGTCTGAGAT
ATACGACATTGGCACTTAAAGGGTTAAACAAGGTGAATAAAAAAAATGTT
TTTCAGCCTTTTTGAGTAATTTTAGGCCAAAAAATCAGTATTAACCCTTT
GGGTGCCAGGGTCTTTTTTTCTAAGTTTTTTTTAAAAAATCGCTAGTTCA
AACTTTAAGGGCTTATATCTCCTGATCTAGAAAGAATTAGAAGCTCGTAT
ATAGCTCGTTGGATAGCTTAGAGTCTCCTCTTTCTTTTGGGCGCCTTCGG
CGCCGCCCGATTGAGGAAGGGCGTGGTGGGCGGCGGCCAAGGGGGGGGGG
TACGTTAGGGGAGTTAAAGCAGTCAGGCCCGCTGCGCGGACCTGACTGAA
CTGATGGAAAGGTGCCCAGTGGTAAAACTTCAAATCAATTCACTAGAAGA
CAGAATAAAGTAAAACAGGGCCAAATTTGGAGGTTCTTGAATCACTCGTT
GACAAAAAATAGTCAAAAAACGGTCAGAATCTCAAAAAAGTGAATTTTTG
TCAATTTTTTGCATTTTTTTGACTTTTTTGCTTAAAATCTCGCTGGAAAG
ACTCATTTTTGAAATTTTTTTTGCTTGACCATAAAGGACAATCTAATTCC
TACGAGTTCGACCAAAAATAACGATTTCTAACTCAAACTGGGCATTACAG
GAGGGCTTCGCCCTCCTATATAGCCCATGTCGTATATATACGACATCGGC
ACTTAAAGGGTTAAGAAAGATAATAATTTTGGCAATTTTTTTAATCCTTT
AAGTGCCACGGTCATTTTTTTCTAAGTTTTTTTAAAGAAAATCGCTAGTT
CAAACTTTAAAGACTTATATCTCGAGATCTAGAAGGAGTTAGAAGCTTGT
TCATAGCTCGTTGGATAGCTTAGAATCTCCTCTTTCTTTTAGGCGCCTTC
GGCGCCGCCCGCTGCGTGGACCTGCCTGAATGATAGAAAGATGCCCAATG
GTAAAACTTCAAATTAATTCGATGGAGGAAAGAATCAAGTAAAGCATGGC
AAAATTTGGAGGTTCATGGATCACTCGTTGACCAAAAATTGTCAAAAAAC
GGTCAAAATCTTAAAAAAGTGGATTTTGTCAAATTTTTGCATTTTTTTGC
ATTTTTGGCTTAGAATCTCGCTGGAAAGACTCACTTTTGATTATTTTTTT
TGCTTGATCATGAAACTCAATCCAATTCCTACGAGTTATTCAAAAATGAC
GATTTCTTACTCAAACTGGGCATTACATAGCCCATGTTTGATATATACGA
CATTGGCACTTAAAGGGTTAATTTACTGGAATCAGATTAACTTTCAAGAA
AACTCACAAAGTTCGCTAGAAATGTTAATGTAAGAGCAAAATTTCTTGGC
TAGAATTCGGATTTTTTATTTTGAGGACTTAATTGAAGTCTTCAGCTTTT
AATTTCTTAAACCAAAAATCCTAAATTCTGGCCATGAAATATTAAATCTT
GTTTTTGATTTTAGAAATTGAAATGAGAAAATGAAATCTCAAACCAAGAA
TGAAATCTCACAACAAGAAAAACAATTCTTAAAAGAAGAATTATTTTTCC
ATCCAAGAATAATGGTTTTTACAGTGTGCATATTTTTAATTTCAAGATCA
TGCTTTAAGTTTAAAGGTTCATGACATTCATGACGTAATGTTTTGTACGG
GAGCACCCAAAATAGACCGGTCGTTTGCGACTAGTTTTATTGTTTGAATT
CAAAATTAATGACAAATACCCGGTATTTTTTGGGTGCCTCCACATAAAAC
ATTTCTTCATGAATATCCACGAATAGATATAACCTGCAGCAGCTGAGTTT
AGATTGTCTTCAGAAAATTAATTTGCGTTCTTAATCGATTCTTTCTCAGG
TTTTTACCCATACGGGAAGCACATTGGAGACGTTATCAAATCTGGTGACA
AAGATGCGACGGAGATGAAATTATTACAAGATACTCCATTCCTTGGAAAG
CAATCTACCAAAAGAGTTTACGTAAGTGCAAAAACAGATCAAGAAATTTG
ACGCAGTTTGGGGCTCCGCAGTGTTTTTTTTTCTGCGCTTTTCTATTTCT
ATTTCTTACCAATTGCTGACTTTGACTCTGACATTTTGTAGGTACGGTTA
TAATTTATTTCTAAACGCTGAAAATGTTTAATGGAAATGTTAATTCAATT
TTATTTTCGCTAAAATCGGTAATGCCTTTCTCATACCTTAATTCTCTAAT
TTTCTCTTCTTTTGTCCCACACAGCTGAATAGTGGCATCCTTTCAACGAA
TGATGCATCGTGGGATCGATTGGACGCTTCATCTCTTCGAAGTGATTGGC
TGATCGGTCTGTTCGGAACACAAGATTTCAATCTGGAACTGGGTGGCGAT
GTATTTTACCGAACCACAAATCAAAAAGATATTCTAAAGGCTATCGATCA
AGACATAAAACGCACGGATCCACGAAAATTTCAATCGACCTCTGCTCTAA
TTATAACCTACATCCTAGTCCCAACACGTGACCTTGATGCGCGACACATG
CTTCAGGTTACCATAGCAACCGATCAAATACAAACATACGCCATCATGAA
TTACCGACAACTTGGACTTTTATCGGGATTGTTCGGTGTGAATGATATGT
TATGTAGACGTTATGATTTAAGGGAAACGAATTCGGACACTTTGATAAAG
ACAGGGTATTTCGGGCAACACGTGATCAAGATTACACCATACAGAAACTG
CTATTTGAAAGGTATTAAGGACTTTATTCAGATTAAAGTGTGAATAGTTC
TTCCGTCTCAATGAAGTGTAGAGCTAGACTTACTAATTAACATCAGTTTT
ACTCAAAAGCTTCTTTTACAGTAGTAGAAAAAAACTACCTAGAAGTTTGT
TTACTATTCCAACTTCCTGTACGGCTTTTTTTCTTCTTTTTGACTTTGAG
GCAGGATTACTTCTACGTTTTGTGTTAAAAGAATAATAGTGGTCTGTAAA
TCGAGACTAGTCTCAACAATGAAGTATAAAAAGATTCGTCTCAAAATTCT
GCATAAAATGTGCTAATTTGCTGTGAAAAATCAATTCTCCGTCTCAGACA
AAAATCTCGCTTTTAATATATCCTCATGATCTTAGGAGATGATAAAAGTT
TTATAAATCGTTGACCATGAGTACTAGCACAAGCTTGTTCGAGGATTCCA
GAAGTCTATCGTTGACTCCTTTTATCAATTTAAAAGAGCTTTCACTTGAA
ATTTTTTTTTTCCGTTAAGGTCTTATCTTTTAATCAGATAAAATTATTCT
TGTTTTAGTTTACCCCACGATAATTACAACCACAACCGCCCTTTCATCCA
CCACAACACCAAAAAGTCCGCCAACAACATCAACCATTTCAACAACAGAG
CTCTTAACTTCTAAAAGGTCAACCACCTCAACTGTTGCAACAAAATCGTC
AACAAAATCCATTACAACGGCAAAAACCTTCATTCCACACATGAATTCAA
CCAAAAAACCTATAAACGGTACTGCGCTTTCTACAACAAAAGAAACAAAA
TATTCAACAAATGTTCCACTAAACACAACAACAACCTCAACATCTAAACC
AACAACAGCCACTTCAAACCAACCTTCGACGCTATTTACAACAAATCATC
CCGCGAACATTTCCAACACATCAGAAGGCAATTCAACACTTTTAACAACT
CCTTCTACAACAACAAAAAACATTGGAAAAACATCAAATTCAAGTGTAAA
AACAACAACGAAAACAACAGCGAATTCAAAAGCTTCTTCATCAAGCACAT
TTATGAAATACTCGACAATGATCATTCCGAAGTCAACAACAAGCTCCCAT
CTCTCCACAGATGTGACAACCACGGGTGAACGAATCTCTACAGTTTCAAC
TGTCAGTAAAACAACTACAAAAGGCAAAGCCAACCAGAAATCCCCAACCA
TCTATTCAG Coding sequence (CDS) from alignment at sc0000098_pilon:207269..214077- >MSTRG.12760.2.p1 ID=MSTRG.12760.2.p1|Name=MSTRG.12760.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3582bp|location=Sequence derived from alignment at sc0000098_pilon:207269..214077- (Clytia hemisphaerica_ch_hm2_pilon)
TTTACCCCACGATAATTACAACCACAACCGCCCTTTCATCCACCACAACA
CCAAAAAGTCCGCCAACAACATCAACCATTTCAACAACAGAGCTCTTAAC
TTCTAAAAGGTCAACCACCTCAACTGTTGCAACAAAATCGTCAACAAAAT
CCATTACAACGGCAAAAACCTTCATTCCACACATGAATTCAACCAAAAAA
CCTATAAACGGTACTGCGCTTTCTACAACAAAAGAAACAAAATATTCAAC
AAATGTTCCACTAAACACAACAACAACCTCAACATCTAAACCAACAACAG
CCACTTCAAACCAACCTTCGACGCTATTTACAACAAATCATCCCGCGAAC
ATTTCCAACACATCAGAAGGCAATTCAACACTTTTAACAACTCCTTCTAC
AACAACAAAAAACATTGGAAAAACATCAAATTCAAGTGTAAAAACAACAA
CGAAAACAACAGCGAATTCAAAAGCTTCTTCATCAAGCACATTTATGAAA
TACTCGACAATGATCATTCCGAAGTCAACAACAAGCTCCCATCTCTCCAC
AGATGTGACAACCACGGGTGAACGAATCTCTACAGTTTCAACTGTCAGTA
AAACAACTACAAAAGGCAAAGCCAACCAGAAATCCCCAACCATCTATTCA
CTGAATAGTGGCATCCTTTCAACGAATGATGCATCGTGGGATCGATTGGA
CGCTTCATCTCTTCGAAGTGATTGGCTGATCGGTCTGTTCGGAACACAAG
ATTTCAATCTGGAACTGGGTGGCGATGTATTTTACCGAACCACAAATCAA
AAAGATATTCTAAAGGCTATCGATCAAGACATAAAACGCACGGATCCACG
AAAATTTCAATCGACCTCTGCTCTAATTATAACCTACATCCTAGTCCCAA
CACGTGACCTTGATGCGCGACACATGCTTCAGGTTACCATAGCAACCGAT
CAAATACAAACATACGCCATCATGAATTACCGACAACTTGGACTTTTATC
GGGATTGTTCGGTGTGAATGATATGTTATGTAGACGTTATGATTTAAGGG
AAACGAATTCGGACACTTTGATAAAGACAGGGTATTTCGGGCAACACGTG
ATCAAGATTACACCATACAGAAACTGCTATTTGAAAGATGAAATTATTAC
AAGATACTCCATTCCTTGGAAAGCAATCTACCAAAAGAGTTTACTTTACC
CCACGATAATTACAACCACAACCGCCCTTTCATCCACCACAACACCAAAA
AGTCCGCCAACAACATCAACCATTTCAACAACAGAGCTCTTAACTTCTAA
AAGGTCAACCACCTCAACTGTTGCAACAAAATCGTCAACAAAATCCATTA
CAACGGCAAAAACCTTCATTCCACACATGAATTCAACCAAAAAACCTATA
AACGGTACTGCGCTTTCTACAACAAAAGAAACAAAATATTCAACAAATGT
TCCACTAAACACAACAACAACCTCAACATCTAAACCAACAACAGCCACTT
CAAACCAACCTTCGACGCTATTTACAACAAATCATCCCGCGAACATTTCC
AACACATCAGAAGGCAATTCAACACTTTTAACAACTCCTTCTACAACAAC
AAAAAACATTGGAAAAACATCAAATTCAAGTGTAAAAACAACAACGAAAA
CAACAGCGAATTCAAAAGCTTCTTCATCAAGCACATTTATGAAATACTCG
ACAATGATCATTCCGAAGTCAACAACAAGCTCCCATCTCTCCACAGATGT
GACAACCACGGGTGAACGAATCTCTACAGTTTCAACTGTCAGTAAAACAA
CTACAAAAGGCAAAGCCAACCAGAAATCCCCAACCATCTATTCACTGAAT
AGTGGCATCCTTTCAACGAATGATGCATCGTGGGATCGATTGGACGCTTC
ATCTCTTCGAAGTGATTGGCTGATCGGTCTGTTCGGAACACAAGATTTCA
ATCTGGAACTGGGTGGCGATGTATTTTACCGAACCACAAATCAAAAAGAT
ATTCTAAAGGCTATCGATCAAGACATAAAACGCACGGATCCACGAAAATT
TCAATCGACCTCTGCTCTAATTATAACCTACATCCTAGTCCCAACACGTG
ACCTTGATGCGCGACACATGCTTCAGGTTACCATAGCAACCGATCAAATA
CAAACATACGCCATCATGAATTACCGACAACTTGGACTTTTATCGGGATT
GTTCGGTGTGAATGATATGTTATGTAGACGTTATGATTTAAGGGAAACGA
ATTCGGACACTTTGATAAAGACAGGGTATTTCGGGCAACACGTGATCAAG
ATTACACCATACAGAAACTGCTATTTGAAAGATGAAATTATTACAAGATA
CTCCATTCCTTGGAAAGCAATCTACCAAAAGAGTTTACTTTACCCCACGA
TAATTACAACCACAACCGCCCTTTCATCCACCACAACACCAAAAAGTCCG
CCAACAACATCAACCATTTCAACAACAGAGCTCTTAACTTCTAAAAGGTC
AACCACCTCAACTGTTGCAACAAAATCGTCAACAAAATCCATTACAACGG
CAAAAACCTTCATTCCACACATGAATTCAACCAAAAAACCTATAAACGGT
ACTGCGCTTTCTACAACAAAAGAAACAAAATATTCAACAAATGTTCCACT
AAACACAACAACAACCTCAACATCTAAACCAACAACAGCCACTTCAAACC
AACCTTCGACGCTATTTACAACAAATCATCCCGCGAACATTTCCAACACA
TCAGAAGGCAATTCAACACTTTTAACAACTCCTTCTACAACAACAAAAAA
CATTGGAAAAACATCAAATTCAAGTGTAAAAACAACAACGAAAACAACAG
CGAATTCAAAAGCTTCTTCATCAAGCACATTTATGAAATACTCGACAATG
ATCATTCCGAAGTCAACAACAAGCTCCCATCTCTCCACAGATGTGACAAC
CACGGGTGAACGAATCTCTACAGTTTCAACTGTCAGTAAAACAACTACAA
AAGGCAAAGCCAACCAGAAATCCCCAACCATCTATTCACTGAATAGTGGC
ATCCTTTCAACGAATGATGCATCGTGGGATCGATTGGACGCTTCATCTCT
TCGAAGTGATTGGCTGATCGGTCTGTTCGGAACACAAGATTTCAATCTGG
AACTGGGTGGCGATGTATTTTACCGAACCACAAATCAAAAAGATATTCTA
AAGGCTATCGATCAAGACATAAAACGCACGGATCCACGAAAATTTCAATC
GACCTCTGCTCTAATTATAACCTACATCCTAGTCCCAACACGTGACCTTG
ATGCGCGACACATGCTTCAGGTTACCATAGCAACCGATCAAATACAAACA
TACGCCATCATGAATTACCGACAACTTGGACTTTTATCGGGATTGTTCGG
TGTGAATGATATGTTATGTAGACGTTATGATTTAAGGGAAACGAATTCGG
ACACTTTGATAAAGACAGGGTATTTCGGGCAACACGTGATCAAGATTACA
CCATACAGAAACTGCTATTTGAAAGATGAAATTATTACAAGATACTCCAT
TCCTTGGAAAGCAATCTACCAAAAGAGTTTAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000098_pilon | genome | sc0000098_pilon:207269..214077 - |
|
