MSTRG.12759.4.p1 (mRNA) -

Overview
NameMSTRG.12759.4.p1
Unique NameMSTRG.12759.4.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000098_pilon:191097..193614+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.12759.4.p1 ID=MSTRG.12759.4.p1|Name=MSTRG.12759.4.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2518bp|location=Sequence derived from alignment at sc0000098_pilon:191097..193614+ (Clytia hemisphaerica_ch_hm2_pilon)
attttcaattttaaattgccaatacccccaagtaaggctcactacttcac aaaaatgccattttatgctttagACAAAGCAAATTTTAAATCTAGTcgga attaggatcctaacctaagaatgctgtaagaatattttaggatgattttc cccaaaaagttaagaatatcaatcatgaaatgaaaaaataccattcttat aaaaaaagcgtgtagtcagTCCCCTTGTATATGGCTTAAATTACTTGTAT AGtcagggggggtcagtactaaaatgtaagacatacatgatgagtactaa aaggattttcgctaatttttgacatacccccacctatttttcaaaaatgt tattttagtacacatgtactaaaattattttgagcaatttaacacagata ccacccattttttgcccttttacggctttaaatttaccaaaatggggtca ttggtacaaacctagtcgaatttagtgcatcaatctgcaaaataatataa ttttattactaaactgtgctgaactgtacataaaactactttaaaaaaat atttaaaaaattggaaaaattctgaaaaattttgaagattttttcgaaaa ttcctgaaaaaaaaaaatcaaattttttccaaaattgtgaaaaaaatgct ccattttggctgattttagaacaaaatactaagatttttcaaaaatttct ttaagggaccaacctttttggtattttagtacacatggtactaaaattat ttttgagcttttttgcagtaccaccacgtcactaaatgtcatgatgtctg agattttagtaccgaccccccccctggtatagttcattaaaaaatgatat gcaacggcattaataaaactatatataatactatatataaaaaatatttt gacagaGGGAAGAGTTTTAATTCAGAAAAATCGCTGTCTCATATTTCACG CATTTTGATACGTGCTAGGCCTTATtggtattttcattttctgttaTAAA AAGGGTACTGTATAAAAGATTATTATAAACATGACATACTTTGTCACATT ATGAACTTTTTCaccgaaaattatttctgacTGTTTCTCGCAATTAAGTA GCCTAAATACACAAACTACTGTGCAACATTATCAGGTAGCAGCACTATCG TATAACATCGATATTACTGTGTTACACTTTTTATAAATGACCCTAATCTA GGACATCAGGGATTTGAAATTGTATGGTATATGGATTTTTTCAATCTTCC ACCTTAGAGCGAGGAGTTGAGCGAAGCGAACATTCGAATCAGTTTGTTAG AGAAGCGTGCTGACAATGCAACAAAAGAAGCCACCACGAAGGTTGAACAG ATGAGCAAACGATTGGAAGGCCTCCAAGAAGAATATCTCGACAAAACAAG GTCAgcttttattatgttttttaaGATGATAAAAATGACTGCATTCGCAC AATTACAAACGGTAAATaggatatttcaaaaatatgtgGATATCGTGCTC GTAACTAGACGTCATCTGGCTACAGTGgagtttccttaactcgaatctct ataactcgaatgtctccttaactcgaacaggttttatggtcccttcagtt aacaatgccacACAAACCTAAAccataattcgaaatttccttaactcaaa ctaatttgtgttctccgtgcgtgtaaattgaatttttttggaCGACTTAA GGTTAATAACCCGACATGCAACATAATGTTACTAGTTATTGAGCGCTATT GAACTAATGTCCATTGAAAATTTACCCTGGTCAGGGAACGCCAACCAAAC GGTTGAATGTCATTTCATTTTGGTCGCGTGATCAATATCGATATGCAATc tattatctgatattccgatggcggattggcggccgcccacgctaaaactc taaaggagtgggccaatttcccatcggaaaGGAATGATAGTCAGCCTTTG ACGTACCGCATCCCCAGTCTGGTTCAACAGCCATTGCACGTAAACCTATA AATATTTCgtttggacccgccaatccccgaaaacgagggctgggttacca gacctcccgctgcaaaattcttgacgcggtctcgcaaaattccgtaatct aaaccttccagattttggaaattttcccgaccttcagagctttagcgtgt cggatggaAATTTCACCATCTGCATCTGGGTGTCAGATAATGCAATCTAC AGTCGTTTATCTAGTTGACGTCCCATTTCCATTGACGCTGATTATGATCA TGTGATCAATATTAATATGCAAAAACAAATATCAACTTAGAAAGTCAAAG CAACCCATGTTCTATATTGAGCACTATTGAACCAATCATATCTCTTATTA TTTCAAACAGGCAAAGTGAGAAGACGATGGATGCTTTACAACACGATGTT GATGAGCTGGAGGTCGAGAAAACTGATCTCAAAAAGAAGTTGGAAATTTA CTCCAAGAAATCCAAACTCGATTATTCAGCTCTGTCTCAACCATCAGCTG CTATGGCCAGCATTGTTG

Coding sequence (CDS) from alignment at sc0000098_pilon:191097..193614+

>MSTRG.12759.4.p1 ID=MSTRG.12759.4.p1|Name=MSTRG.12759.4.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=990bp|location=Sequence derived from alignment at sc0000098_pilon:191097..193614+ (Clytia hemisphaerica_ch_hm2_pilon)
ttttcaattttaaattgccaatacccccaaAGCGAGGAGTTGAGCGAAGC
GAACATTCGAATCAGTTTGTTAGAGAAGCGTGCTGACAATGCAACAAAAG
AAGCCACCACGAAGGTTGAACAGATGAGCAAACGATTGGAAGGCCTCCAA
GAAGAATATCTCGACAAAACAAGGCAAAGTGAGAAGACGATGGATGCTTT
ACAACACGATGTTGATGAGCTGGAGGTCGAGAAAACTGATCTCAAAAAGA
AGTTGGAAATTTACTCCAAGAAATCCAAACTCGATTATTCAGCTCTGTCT
CAACCATCAGCTGCTATGGCCAGCATTGTTttttcaattttaaattgcca
atacccccaaAGCGAGGAGTTGAGCGAAGCGAACATTCGAATCAGTTTGT
TAGAGAAGCGTGCTGACAATGCAACAAAAGAAGCCACCACGAAGGTTGAA
CAGATGAGCAAACGATTGGAAGGCCTCCAAGAAGAATATCTCGACAAAAC
AAGGCAAAGTGAGAAGACGATGGATGCTTTACAACACGATGTTGATGAGC
TGGAGGTCGAGAAAACTGATCTCAAAAAGAAGTTGGAAATTTACTCCAAG
AAATCCAAACTCGATTATTCAGCTCTGTCTCAACCATCAGCTGCTATGGC
CAGCATTGTTttttcaattttaaattgccaatacccccaaAGCGAGGAGT
TGAGCGAAGCGAACATTCGAATCAGTTTGTTAGAGAAGCGTGCTGACAAT
GCAACAAAAGAAGCCACCACGAAGGTTGAACAGATGAGCAAACGATTGGA
AGGCCTCCAAGAAGAATATCTCGACAAAACAAGGCAAAGTGAGAAGACGA
TGGATGCTTTACAACACGATGTTGATGAGCTGGAGGTCGAGAAAACTGAT
CTCAAAAAGAAGTTGGAAATTTACTCCAAGAAATCCAAACTCGATTATTC
AGCTCTGTCTCAACCATCAGCTGCTATGGCCAGCATTGTT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.12759MSTRG.12759Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12759.4.p1.exon1MSTRG.12759.4.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.12759.4.p1.exon2MSTRG.12759.4.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.12759.4.p1.exon3MSTRG.12759.4.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12759.4.p1MSTRG.12759.4.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000098_pilongenomesc0000098_pilon:191097..193614 +