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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000098_pilon:132866..138872+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12754.1.p2 ID=MSTRG.12754.1.p2|Name=MSTRG.12754.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6007bp|location=Sequence derived from alignment at sc0000098_pilon:132866..138872+ (Clytia hemisphaerica_ch_hm2_pilon)
aattgcaatacatttatttttcagctataaatagaaaaagaaaatgaatt
ccTTCACTCTACGAAGATGCTCCTGTTTTTTAAGGCAGGCCCTACAGCAA
ACACACCATTTCCAACGACGTAACTTCCAAAGTATTACAAATAGTCAGCA
AAGAATACAACACCATGACCTGTTGGCAACTCCATCAGTACTCGTAACAT
CCCAACGTTATGCCTCAAAGAAAGGTAACAAGCTTTCTAATCAATTTTTA
AGGTAAAATGACAAGATACCATTCCaaaaaaaCTAAACTGGAGATTATCA
GGACTTCTAGATGATCTAAATGTGGGTCTAGTGAATTCTTCTTCGAATCT
TACGTTCATGCGATTGCTTAAAAAGAATCTCATCTTAAGAAGTGGCtact
atattttttatttttgtctggtttctgccttaaatgtttagatttttgat
atttttttctccaaatctTCGACAAAGTTGGCGTTCATACTATAAATGAA
TTGTAttcatctttttcatcttcaagcCAAAAAGAAGAAAGGTTCACCAG
GAGGTAGCGGTGGGTCTTCAAAAATTGATACCTCAGTTGGAGATGGGATC
TATGATTTGAATTCAGTGAAACAAGATATGGAACGAAATCTAGATCGACT
CAAAGATGAAATGAAACATAAATTCCAAGGAACACTAACACTAAGTGAGA
TCAAGTCTTTTCTTTAGTTCTTAGAAAGATTTTGACCCCTTGTAGATCAA
ATTCAAATGATTTATGTTtgcttctttgaaaattttctttgactttCACT
TACCTTTCAATACCTCCATTTTTTCAGGTACGATAGACAATATCTTTGTT
ACATTGGATGGTACATCTTCACAACTTTTTGAAATAGCACAATGCACTGC
TcttgaaaaagaatttgttaTACAACCTATGGTCAAaggaaaaaatgtaa
gaaagaATTTATAGGTagttttctttgtttgttttattaatgaaaaatta
actgaTTTTGCTAGCCctcactttttaattttcatggaTCCttttttttt
CCCACAAGATTTTAAACTCTTCTACTTTTTAGatagaaaaacaaattatt
gATGGCATAAATCACACAGGACTGAATTTACGGCCAAGGTTAACAGAAAA
GACTATCACAATTGACAAACCTATGTAAATCATCTTTCTGTTGCAATACA
tttttttAGTAGTTTTTAGTTATTATTCTATAGCTTTTAAATTGAATTAG
TGTGACTGAGACTCAATTTCCTTTCAAACAAACCCATATGGAAAATGAGC
ATCATCACCAGGTCATTATGTTTATAGTATTTTTTATCGTTTGTTCTAAC
GACTAAATTATTGTTAATTGTTATATATCTTATTTTACTGAAGCCATGAA
ACTCTTGAGTTTGAAATAAGAATTTAGCCAACTCTCATATTTAACAGTCT
GCGAGGAGAAGATGAAAAGCTTCCAAGTGTAATATTCTGTATTAGTATGT
AATTTATAggctgaaatgaaaaataatatttttacctTTAGCTCGAACAC
TGAATACAAAACCAACCTGATGAAGCTTGCGAAAGGTTCCGCTGAAAAAT
CCAAGACTAACATACGGAAAATACGACAGCAATCGTTTTCACAACTGAAG
AAAATTAAAGATGCCAGCAaggatgaaataaaaatgatcgaaaaacaggt
tttttttaacttcattAATGGTCTTCATCTACCTCAATAAATTGAAATAC
TTTTCTAGATATTATAAGTTATCTTTGTCCGTGGAATAAAATTTACATAG
GAAAAAGTCGTTCATTTCTGCTGGCATCATCATCAAACATTTTAATATTG
TTCTTATAGGTTGAACTATTGACGGAAAATTCCAACCAAAGCATCGATAA
AATGATCGAGTCAAAGAAAAAggaattaaaattttaatttttagccaatt
gtagatagtttttatttttcaaatttgttttttttctaccACACGTATGA
GTGAATTTTTGGGTGTCCCTTTCTTCTTTAATGAGCCCTTTTTCGGATGg
ctttatttgaaaaactttttaataatAAGTCGTTAATCCATCTGCTAGAG
CTAATTATACTAGACCGATACTTGTTATTTCAGGtagataaaaatcaaaa
ctaaacaATGAACAAAACAAGTAGACTTTTAGGAAAACTAGCACAAGCAT
CTACTACAACAACAAGCGTACGAGAAATGAATAAATTTCCACCCGTTACA
ACGCCCATGTTGCCACCCAAATCTTTTGATGGGAAAGTTGCCCTCATTAC
GGGCGGTGGTACTGGTTTGGGAAAAGGAATGGCTACAATGTTGTCCAGAT
TAGGTGCTACCGTTGCAATTGCGGCTAGGTATGTATGCATGTATAGCCAA
TTCGCTATCACCTGAGATTAAATACTTTTAAAGAAACACTTGCTCTCACA
AATTTCATTGTGAAATACTTATAGGTTTAACTTAGGCTTAACTTAGGACC
ACTTCAGGTTTCTGcaggccaaatatctcaaaccatctgattatcccttt
aatttatatattgtattatagatgtttaaaatatttcaattttcttacaG
ACGGTTACCAGTATTGGAGGCAACTGCAAACGAAATCATGAACGAAACTG
GATCTACAGTATAGTTCTTGACTTATTCTAAACTTAACTTATAAACTTAT
AAACTCCAATCACATTTTAGCAGCTGATGATGTTCTTAAGTGAaactttt
catattttgttcTTCACCATGTTATATGTTAATGAGGCTATCTTAAAAAC
TTCTCCTTAGGCTactaagaaaatataaaaattacaagaaggttcatttt
cttttgtcataTTCGACTTCACTGCTCACAAAATGAGGCTTTTAGTAAAA
AGATAATAACAAGTTTGAAATCTTAAGTCTTAGGTCCTAGGTCATTTGAA
CAATCCCACTCAGTgttcataaaaatttttaacCTCCTCATACACTAGGT
TCTTCCCATCAAGATGGACGTACGTGATCCAGAAGCTGTCAAAGCAGCTA
TCGATCACCTGGAACAAGCTCATGGTCTTCCCAACATTGTCATCAACAAT
GCAGCTGGCAACTTCATCTCACCTTTTGAACGTCTTTCACCAAACGCCTT
CAAAACTATTGTGGATATCGTATTGAATGGAACAGCTAATGTGACTTTAG
ATGTTGGCAAACGATTGATCAAGGCTGGACAAGGTAACGCGCCTTTAAGC
TAAGATGACTTGAGATTCATTATTAAAAATTCAAGTTTAAGGAAATGGTC
TATTCAAGATTATTTATTATTGAGCAGGACTGTGATTTAGGCTTTGACTT
GAGACTTTAAAACCAAATTAATTCCCTGTAGATGAAAGGGAGTTTCAGCA
AGAGACTATCTACCAACGTGAAATAGCTTTCCCTGTATACAGACATACTA
AAATCCTTGTCTTGACAAACCTTTTGTGTTGTTAACTATTATAACCTAAC
TTAACTTAATTTGCTTATTGGAAAACTAGATGATACCATTGTTGAAATAG
AAAGACTTCTTATAACATAATAGCATAAcataaatatttaattttgtttt
aaacaaaaggtGAGCTTTTGACTAGTTTCTATAAACGTGATTTTCACTCC
AGGTGCGAATTTTTTGGCCATCACAACTTGGTATGCAGAGATGGGTTCTG
GTTATGTCGTCCCTTCAGCATGCGCTAAATCTGGCGTCGAAGCTATGACT
AAGTATTTCAATCTATTGTTCATCTTCTTACTTTTTGCATAATTAGCTCT
GTTGGAAGTGTCTCTCAAATCCTCATTCGGCACTTCAAAGACAAATTACT
TTAAAGAAATTCTGTTATCGCTTTTGTGTATCAGTTACGAATTGATGTAA
ACTTTTCACAGGTCCctattcatttttgaaattcgtCATAAGAAGGTACA
AACACTTAAAACACAACTAAGCTTACATTTGCCCACTAGAAGAACCGAGA
AActagaaataaaaagaaatgataaaaaataatccCTTCTTTAGATCGTT
GTCATCAGAATGGGCGAAGTATGGGATGAGGATGAATATTATCGCCCCTG
GTCCTTTTGAAACGGAGGtattttaaagtgttattgCTTTTTTCGACGAT
ATAACGATATCCCAATATATACAGGGTCTTATTTGAAGAAAAGTCTGTAT
GCATAAAATCATGTTCCGGCGAGGATTAAATTTGCCGGACGGCATGGTAA
ATCGGTatctttttgcctaaaaatgagTGTTTTGGCAAGAATTAAGGTTT
GATttcgaaaattacaaaaaaagttaattttggcGACAGCCCATTTGGCA
AATCTTGTCAAAATTCCTTTAAAGATAATAGATTTTCTCCAATACGAGGA
CTTGGGGATGGTTTGTTGATTGCTTTCCATTGTTTGTGCTTCTATTATAG
GGTGCTTTCAAACGACTCGACCCTACTGGTGAATTCACAGCTCAAGGGAA
GAAGAAAATTCCAGTGAAACGCTTTGGTGAGATTGAAGAACTGGCGAACT
TAGCTGCATACATGGTGTCTGACTACTCGAGCTTCTTGAATGGTGAAGTA
AGTACTTGTAAACAATCGTATTGTTTGATCAAAACTTAAagctattgttc
caaggttaaggGTTGCTTCTAaggctcaaaaatattttaatcaacTAGAT
GTCTTTTGAGAAGTTAACATGTCTTTTAGAAGGccgtgattttgattttg
atttatcttattttccctttttaactgaactctggttctttttctcaata
aatgaaaatgtttttcctcTTTGTCTAGATAATTACTTTCGATGGTGGAG
AGAAGAGAGCTTACAGTGGAAACTTTAACGGTTTGGATATGGTATGTTCT
TAAACTGATTCATTCAGTTTCTGTTATTGACACCTTGCCATCACTTCGTA
ACTTAACGTTTTCAAATAGTTTCCTTTTGATTTCAAAGTGCGTTTACACC
CCTGAGAAAAAGAAAGTTAATCTGGACTTTATTTCGGGTGGGGTCAAAAG
TAGGACGGCATGGTCTCAAAGCTCCTAGGTTCAAACCTACTGGTACAAGA
CTGAAAAAGTAAAGCGATTCCTTTTGATGTCAGTGTGTTCAAAGGGTTAA
TATCGTGGAACCCTTTCAACACCTACCAACCTTCATCAGTATATTAGCGT
CCGAAATAACCAGGATCAAATTTCGTTAAATGTTGTTTTATCTGAGCGTA
TAGTAAAACCTATGTAAACTCAAACCTAAACTCGCTTagctttttttttc
acttaaaacgCCAATAATTAAATTACTTTGTTATTTTTCCAGGTACCACA
AGAGCAATGGGATATGCTCGAAAATATGATCAGAACCACCAACAAAAAAT
CCAAATTGTAGATTATAATTTTTAACTCAATTAATCCCCTTTGAATTACT
CCTGATCCACAGTCATACACGATTGCACACCTACATATTGCATTGAGAAA
CTATAATGGCAAGTTTTTGAAACTGCTTTTAGTCCTAAAGCAAGTAGCAC
CAAGACGGTCAACTCTCATCTAAACAATAGCTCACCAATAATTTTACTCC
AACCACCTCGGGTATACATTAAATTGCATAAAGTACatacaatatttttt
gaattttttaggaaggataaaatcataatttattattattaatttttgga
cctacctggaggtcctataaattaacctgtgttcgtccgtccgtccgtcc
gtctgtccgtccgtccgtctgttaccaacttttctcaggattgaatcata
ggaatcttttgatttttggtacaaaggtgcaaaatggtagtggccaaaat
gtgacggagcccgattttcgaaaaaaaaaaattttgggcaaatttgggct
aaaaaacggctaaaaaacgggttttttggactttgtgaaaaattggatca
ttaattttttctgattttttgcatgaaagtaggctaacatcattggtaaa
atatggc Coding sequence (CDS) from alignment at sc0000098_pilon:132866..138872+ >MSTRG.12754.1.p2 ID=MSTRG.12754.1.p2|Name=MSTRG.12754.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4770bp|location=Sequence derived from alignment at sc0000098_pilon:132866..138872+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaattccTTCACTCTACGAAGATGCTCCTGTTTTTTAAGGCAGGCCCT
ACAGCAAACACACCATTTCCAACGACGTAACTTCCAAAGTATTACAAATA
GTCAGCAAAGAATACAACACCATGACCTGTTGGCAACTCCATCAGTACTC
GTAACATCCCAACGTTATGCCTCAAAGAAAGcCAAAAAGAAGAAAGGTTC
ACCAGGAGGTAGCGGTGGGTCTTCAAAAATTGATACCTCAGTTGGAGATG
GGATCTATGATTTGAATTCAGTGAAACAAGATATGGAACGAAATCTAGAT
CGACTCAAAGATGAAATGAAACATAAATTCCAAGGAACACTAACACTAAG
TACGATAGACAATATCTTTGTTACATTGGATGGTACATCTTCACAACTTT
TTGAAATAGCACAATGCACTGCTcttgaaaaagaatttgttaTACAACCT
ATGGTCAAaggaaaaaatatagaaaaacaaattattgATGGCATAAATCA
CACAGGACTGAATTTACGGCCAAGGTTAACAGAAAAGACTATCACAATTG
ACAAACCTATCTCGAACACTGAATACAAAACCAACCTGATGAAGCTTGCG
AAAGGTTCCGCTGAAAAATCCAAGACTAACATACGGAAAATACGACAGCA
ATCGTTTTCACAACTGAAGAAAATTAAAGATGCCAGCAaggatgaaataa
aaatgatcgaaaaacagGTTGAACTATTGACGGAAAATTCCAACCAAAGC
ATCGATAAAATGATCGAGTCAAAGAAAAAggaattaaaattttaaatgaa
ttccTTCACTCTACGAAGATGCTCCTGTTTTTTAAGGCAGGCCCTACAGC
AAACACACCATTTCCAACGACGTAACTTCCAAAGTATTACAAATAGTCAG
CAAAGAATACAACACCATGACCTGTTGGCAACTCCATCAGTACTCGTAAC
ATCCCAACGTTATGCCTCAAAGAAAGcCAAAAAGAAGAAAGGTTCACCAG
GAGGTAGCGGTGGGTCTTCAAAAATTGATACCTCAGTTGGAGATGGGATC
TATGATTTGAATTCAGTGAAACAAGATATGGAACGAAATCTAGATCGACT
CAAAGATGAAATGAAACATAAATTCCAAGGAACACTAACACTAAGTACGA
TAGACAATATCTTTGTTACATTGGATGGTACATCTTCACAACTTTTTGAA
ATAGCACAATGCACTGCTcttgaaaaagaatttgttaTACAACCTATGGT
CAAaggaaaaaatatagaaaaacaaattattgATGGCATAAATCACACAG
GACTGAATTTACGGCCAAGGTTAACAGAAAAGACTATCACAATTGACAAA
CCTATCTCGAACACTGAATACAAAACCAACCTGATGAAGCTTGCGAAAGG
TTCCGCTGAAAAATCCAAGACTAACATACGGAAAATACGACAGCAATCGT
TTTCACAACTGAAGAAAATTAAAGATGCCAGCAaggatgaaataaaaatg
atcgaaaaacagGTTGAACTATTGACGGAAAATTCCAACCAAAGCATCGA
TAAAATGATCGAGTCAAAGAAAAAggaattaaaattttaaatgaattccT
TCACTCTACGAAGATGCTCCTGTTTTTTAAGGCAGGCCCTACAGCAAACA
CACCATTTCCAACGACGTAACTTCCAAAGTATTACAAATAGTCAGCAAAG
AATACAACACCATGACCTGTTGGCAACTCCATCAGTACTCGTAACATCCC
AACGTTATGCCTCAAAGAAAGcCAAAAAGAAGAAAGGTTCACCAGGAGGT
AGCGGTGGGTCTTCAAAAATTGATACCTCAGTTGGAGATGGGATCTATGA
TTTGAATTCAGTGAAACAAGATATGGAACGAAATCTAGATCGACTCAAAG
ATGAAATGAAACATAAATTCCAAGGAACACTAACACTAAGTACGATAGAC
AATATCTTTGTTACATTGGATGGTACATCTTCACAACTTTTTGAAATAGC
ACAATGCACTGCTcttgaaaaagaatttgttaTACAACCTATGGTCAAag
gaaaaaatatagaaaaacaaattattgATGGCATAAATCACACAGGACTG
AATTTACGGCCAAGGTTAACAGAAAAGACTATCACAATTGACAAACCTAT
CTCGAACACTGAATACAAAACCAACCTGATGAAGCTTGCGAAAGGTTCCG
CTGAAAAATCCAAGACTAACATACGGAAAATACGACAGCAATCGTTTTCA
CAACTGAAGAAAATTAAAGATGCCAGCAaggatgaaataaaaatgatcga
aaaacagGTTGAACTATTGACGGAAAATTCCAACCAAAGCATCGATAAAA
TGATCGAGTCAAAGAAAAAggaattaaaattttaaatgaattccTTCACT
CTACGAAGATGCTCCTGTTTTTTAAGGCAGGCCCTACAGCAAACACACCA
TTTCCAACGACGTAACTTCCAAAGTATTACAAATAGTCAGCAAAGAATAC
AACACCATGACCTGTTGGCAACTCCATCAGTACTCGTAACATCCCAACGT
TATGCCTCAAAGAAAGcCAAAAAGAAGAAAGGTTCACCAGGAGGTAGCGG
TGGGTCTTCAAAAATTGATACCTCAGTTGGAGATGGGATCTATGATTTGA
ATTCAGTGAAACAAGATATGGAACGAAATCTAGATCGACTCAAAGATGAA
ATGAAACATAAATTCCAAGGAACACTAACACTAAGTACGATAGACAATAT
CTTTGTTACATTGGATGGTACATCTTCACAACTTTTTGAAATAGCACAAT
GCACTGCTcttgaaaaagaatttgttaTACAACCTATGGTCAAaggaaaa
aatatagaaaaacaaattattgATGGCATAAATCACACAGGACTGAATTT
ACGGCCAAGGTTAACAGAAAAGACTATCACAATTGACAAACCTATCTCGA
ACACTGAATACAAAACCAACCTGATGAAGCTTGCGAAAGGTTCCGCTGAA
AAATCCAAGACTAACATACGGAAAATACGACAGCAATCGTTTTCACAACT
GAAGAAAATTAAAGATGCCAGCAaggatgaaataaaaatgatcgaaaaac
agGTTGAACTATTGACGGAAAATTCCAACCAAAGCATCGATAAAATGATC
GAGTCAAAGAAAAAggaattaaaattttaaatgaattccTTCACTCTACG
AAGATGCTCCTGTTTTTTAAGGCAGGCCCTACAGCAAACACACCATTTCC
AACGACGTAACTTCCAAAGTATTACAAATAGTCAGCAAAGAATACAACAC
CATGACCTGTTGGCAACTCCATCAGTACTCGTAACATCCCAACGTTATGC
CTCAAAGAAAGcCAAAAAGAAGAAAGGTTCACCAGGAGGTAGCGGTGGGT
CTTCAAAAATTGATACCTCAGTTGGAGATGGGATCTATGATTTGAATTCA
GTGAAACAAGATATGGAACGAAATCTAGATCGACTCAAAGATGAAATGAA
ACATAAATTCCAAGGAACACTAACACTAAGTACGATAGACAATATCTTTG
TTACATTGGATGGTACATCTTCACAACTTTTTGAAATAGCACAATGCACT
GCTcttgaaaaagaatttgttaTACAACCTATGGTCAAaggaaaaaatat
agaaaaacaaattattgATGGCATAAATCACACAGGACTGAATTTACGGC
CAAGGTTAACAGAAAAGACTATCACAATTGACAAACCTATCTCGAACACT
GAATACAAAACCAACCTGATGAAGCTTGCGAAAGGTTCCGCTGAAAAATC
CAAGACTAACATACGGAAAATACGACAGCAATCGTTTTCACAACTGAAGA
AAATTAAAGATGCCAGCAaggatgaaataaaaatgatcgaaaaacagGTT
GAACTATTGACGGAAAATTCCAACCAAAGCATCGATAAAATGATCGAGTC
AAAGAAAAAggaattaaaattttaaatgaattccTTCACTCTACGAAGAT
GCTCCTGTTTTTTAAGGCAGGCCCTACAGCAAACACACCATTTCCAACGA
CGTAACTTCCAAAGTATTACAAATAGTCAGCAAAGAATACAACACCATGA
CCTGTTGGCAACTCCATCAGTACTCGTAACATCCCAACGTTATGCCTCAA
AGAAAGcCAAAAAGAAGAAAGGTTCACCAGGAGGTAGCGGTGGGTCTTCA
AAAATTGATACCTCAGTTGGAGATGGGATCTATGATTTGAATTCAGTGAA
ACAAGATATGGAACGAAATCTAGATCGACTCAAAGATGAAATGAAACATA
AATTCCAAGGAACACTAACACTAAGTACGATAGACAATATCTTTGTTACA
TTGGATGGTACATCTTCACAACTTTTTGAAATAGCACAATGCACTGCTct
tgaaaaagaatttgttaTACAACCTATGGTCAAaggaaaaaatatagaaa
aacaaattattgATGGCATAAATCACACAGGACTGAATTTACGGCCAAGG
TTAACAGAAAAGACTATCACAATTGACAAACCTATCTCGAACACTGAATA
CAAAACCAACCTGATGAAGCTTGCGAAAGGTTCCGCTGAAAAATCCAAGA
CTAACATACGGAAAATACGACAGCAATCGTTTTCACAACTGAAGAAAATT
AAAGATGCCAGCAaggatgaaataaaaatgatcgaaaaacagGTTGAACT
ATTGACGGAAAATTCCAACCAAAGCATCGATAAAATGATCGAGTCAAAGA
AAAAggaattaaaattttaa
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000098_pilon | genome | sc0000098_pilon:132866..138872 + |
|
