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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000097_pilon:1022074..1025544+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12743.1.p1 ID=MSTRG.12743.1.p1|Name=MSTRG.12743.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3471bp|location=Sequence derived from alignment at sc0000097_pilon:1022074..1025544+ (Clytia hemisphaerica_ch_hm2_pilon)
cactttcgttttcatatTTCACCATCAGATTGCACCAGGATTTTGAAACT
ACCAGCTGACCAGAGCATATTTAAAGAGAGGTAAGTCAAAGAACATTTCA
TAGCTCaaacttcactttttgaaaGGTATTTAGATTCGGATTTATGCTTA
CAACACTAGGAGTAGTAGACACTCTTCAAGTTTTGCCACAAGAAAATCAA
ATGagttttaaagttaaaaaaaatcaaaggtgTAAACAAAAGCATACCAT
TATGGAGGTAAGATACAAATCTGTCATACAGTAGAGAGTTTATATAAATA
TGATTATACCTTGTTATTATCTTGGGAAGATCAACCCGCTTTCAGTTAGT
CTAAGAAATCATggtaaaaacaacatcagtcaacgaccctcgacatggcc
cgagaattctcaggccaaaacttttattggaattcgcgtaaagcccgagt
atggcccgagctggcccgagaattctcgggccatgttcgggccgcgCACG
GGCCACattcgggccaatttttgaaaacatgatttaaacaggcgtgtaat
ttcaggactgatttttttaacattttctttgagaaaaacttggtttctct
taattatattagatatatgaatgttgtaaattcatataaatattaaatgt
cttatttggtatgaaaacatagttataaatatacttagggtggaaatatt
tgctagtaaactggtcctggttttaaactgaagcgtgtccacgggaagct
cgtaaagtttttttgagcgatataaacaaaacagacaaatcttattttgt
actattttgtttgactggacatgctaaatcaatttaacatttaacatggc
ccgaacatggcccgaatgactcgggtcatgttcgggccaaaagaattgat
agggtctctcggcccgaacatggcccaaAGAGGCTCGAGAATTCTCAGGC
CATGTCGATGGGTCGTATCAGTCATCTACTggaaagtgctgggtcaaaaa
tttgcattaagccaatctcaagatatcggtcaaaaaCTGATTTTGATGTG
TTTTTTCGATGTATTTTATAACGTCAAAATCAAtttttgaccgatatctt
gagattggcttaatgcaaatttttgacccagcacttttcgaaatccgctC
GTTCatatgattcttttgagctatatatgaacgttgaggaataattggaa
gcggtgcgcgtcacgcaaaatatatttgggacatgccttgtttcacccga
ggggggggtggggttcgaataaacaggggggatggaaaatcttcgagatt
ttaataaacgggggagacctaattgccaggggggttggaaattgtacttc
tgaaaacccaaaataaggtaaatataggctaaaatcaggctaatTAGAGC
AAAATAAAGGGCCTTctttttgacagctgaaaatatttttaagaattaat
aaacgggggggtcctaataaggtccggggcagtttaaaaattttccaaaa
attaacaagcggggacccgtttatttggcacctaagagtacgtaTAAATA
TTGGTCTAATGTTAAATGTCAACAAGattttatctttccaacaaggtAGT
CATATTTTCCCTCAAGAAGAGCAATCTATCAAAATATGGCAACTGGTAAT
TTTTTGGGAACATACTTTAAAACTTTTCAGGATACTTCTATTTTCCTGCT
GATTTTCTTGATCTGGTGATAATTCATGTTACtcaaacttgattttttga
tttctatTAGGTAACAGGATTTTCAACACAGCCATACAGAAACCAGAACG
CTGgatcaaaagaaaataatttatcgTTGCAGAATGTCTCATCGGATGAA
GAAGAAGTTTGCTTTTGCTTCCACGAGGATGATGTCCTTGATGAATCTTT
TTTCAGTGATTTGATGtacaaaagcaagaaaaaacaattaaagTCATCGC
GACCAAAGCGCAAGGTCAGATCAACTGTGAAACAGACATTTAGAAACAAG
CAGGAATTTTTCAAAGGGAATGATAACAACAATAAAGGTGTTGATGATGA
AGTCGAATTAACACAAGTCCTTAGAGAACTTCCTCCAAAGATCAATCTAA
AtttgaatcaaatcaaaaaggaaatttcaaaatgtcaaacaatcGAGGAC
AACCATCTTCTACACAAGAGGAATATTAAtaaaaagctaaagaaaaacaa
tattttgagaTGCTCCCAGCTCCCTAAAAGTTATTCATTACCAAACCAAA
GCCGAATTTCTCAGCAAAAACTCGAATACAAGTCTGTTGAAGAGAAAATG
CTAGAACTTCAATACCGTGATATTAGTTATTCAGATTATGAACTTCTCTT
GACACTGGACGATACAGTTAAACCGCCAACTGCAAACAAGTCAACCCTCA
ATAAACTATCACAAGAAATGAAGAGGAACAGTGACAGTGAATTATGTGTA
ATTTGCATGGGTGATATTTTGTTTCAGGAAATTGTTATTACTTTACCGGA
ATGTGGACACCGTTTTCATAAATCTTGCATAGAAAATTGGTTACTGAATT
GTTCGAAACAATGCCCTGTGGATATGACATATATTTGTTAAcactatttt
tttatcttttttcagcACCCATTCATGCTATATTAGAAAGTTATACACCT
TTGGATTTGTTAGTTAGTTTGGATTTCCAAAGAGAATAATCTACGAAAAA
CCTgaacacagatttgaaatcagcaaggtttaaattttgaaatagcttGC
TGTTATGATTTTTGGGACAATCTGGAACAGTACaaaaaatcttcactttt
ttcatctccatttttcaatttttcaaaaaaattttatccttTAGATTATT
CTTATTATAACATAGCATGGATGAGAAAAGATCACATAccatattcaaaa
aatgtttctatAAATCTGTAAAGCTGTTCCTGTTCGGGGGTGAAACTAAT
GTTAACAgttcctgaaataatagagcttttgccatgaaattttctgtaaa
ttcctaactttaaATTAGCTTAAAAAATTGACACCCTTAAAATCTTCACA
CCTTGCGCATGATGAAATTTCTGACAGTAGGGTGTCACAAAAGTTAacac
atttccaatacaaatttatttttaatgtcaaatatatcgtttaaaccgta
atatattgaatatttaggataaaataagcattttagactcagggaacttt
tttctaaagcctttgttagaatacaatagctaatTATAAATTACAAATGA
Agtattttagctcgagaaaacagagacctgttgtatatttttggtaagct
ctcaaaaaattaagataagaGATATATTgtaagtataggtgatttctgta
cctaactagagatattaacccttgaaaaccttgtttttcagccagaaaca
gctattttgtccagtttttgcgccttttgaagctcaatatctcgagttag
gtactgaaatcacctatactt Coding sequence (CDS) from alignment at sc0000097_pilon:1022074..1025544+ >MSTRG.12743.1.p1 ID=MSTRG.12743.1.p1|Name=MSTRG.12743.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=678bp|location=Sequence derived from alignment at sc0000097_pilon:1022074..1025544+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGtacaaaagcaagaaaaaacaattaaagTCATCGCGACCAAAGCGCAA
GGTCAGATCAACTGTGAAACAGACATTTAGAAACAAGCAGGAATTTTTCA
AAGGGAATGATAACAACAATAAAGGTGTTGATGATGAAGTCGAATTAACA
CAAGTCCTTAGAGAACTTCCTCCAAAGATCAATCTAAAtttgaatcaaat
caaaaaggaaatttcaaaatgtcaaacaatcGAGGACAACCATCTTCTAC
ACAAGAGGAATATTAAtaaaaagctaaagaaaaacaatattttgagaTGC
TCCCAGCTCCCTAAAAGTTATTCATTACCAAACCAAAGCCGAATTTCTCA
GCAAAAACTCGAATACAAGTCTGTTGAAGAGAAAATGCTAGAACTTCAAT
ACCGTGATATTAGTTATTCAGATTATGAACTTCTCTTGACACTGGACGAT
ACAGTTAAACCGCCAACTGCAAACAAGTCAACCCTCAATAAACTATCACA
AGAAATGAAGAGGAACAGTGACAGTGAATTATGTGTAATTTGCATGGGTG
ATATTTTGTTTCAGGAAATTGTTATTACTTTACCGGAATGTGGACACCGT
TTTCATAAATCTTGCATAGAAAATTGGTTACTGAATTGTTCGAAACAATG
CCCTGTGGATATGACATATATTTGTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000097_pilon | genome | sc0000097_pilon:1022074..1025544 + |
|
