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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000097_pilon:616754..620461+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12715.10.p1 ID=MSTRG.12715.10.p1|Name=MSTRG.12715.10.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3708bp|location=Sequence derived from alignment at sc0000097_pilon:616754..620461+ (Clytia hemisphaerica_ch_hm2_pilon)
GGAAATTAAGACTATAACTTGTTGATGTTCTTTATATTTACAGCGTTTGA
AACGATAATAAACAATTAGTAAAAATTATACACACAAATTATACCGATTA
CTCAAATCAAGAATATTgcaattatttgaaaaaaaaaaagacctttgaat
atttatttttggaaaatatctaCTTTGATCAAAATGAAGAATTGTTTGTG
TCAGATAGTTATTGTATTTTTGGTATTGCCTTATACAGCAGTAAGTAGTT
TTAACTAAAGGTGTAAAAGTAGTTTAAGACCTTAATTATGCCATGTATAT
TTTTTATACCGCGCATGTATATTTTCACCTTTACTATCCCTGTAAatgac
gataacatcgtctatttACGACCATAATTAGAGAGGTACCTCTTTCGTCT
CTCCCcttacagccccggtggaatcggggagactggggagacttcagccc
tacttttgagaaaatgagatttttttctcaaattcctagcaaattttatc
tcattttgagccttaagCCTCCCCACCTGTAAACCGCCGCGCCTGACTTA
CCTTTAAAGTTAACACTAACACCTGGGTTTTGATCGAAGCCACAACCTGG
GCAATGTAGCGTATCTGACTACTAAACCTGTACATTATCTAAGTTTTAAC
TCTAAACACAATGTTTTCATTTACTGTATCTGACTGTATTCTTATAGTTT
TGCTTAAAAAGTAATATACTTTGCAgacaattttctatttttacttCCCT
CTTAATTTCATTGACGTTTAAAAGTGGAAGGTATTAAAGTTACCTGGCTA
ATCTTATATCTTAGTCAAACAAATCTGACAGCCTCTTGTCAATTTTCTTC
TTGCAACATAAGAACCATCATCAAAGGGTCcttgttttatattttgtact
tttAGCCTTAAAAGCTGAATGTACAAATTCATATCACGACTTAAAAAGAT
GCCTAGATTGATATATATGGGTTTCAATCAGTTGttttttttGACAGAAT
gttataattttcatttctattttttttaggcACGAGTGGCTTTTGGCAAT
ATGCTTTGCAAGAAACAATCTGATTGTCAGGATAATCAATGTTGTGCTAT
GGTCGCTGTCGGCAAATCACGGACTGGATTTTGCATGCCTGCTAAACAAC
TCGGAGACAGATGCGCGCCGACATTTATAGTAAGTCATGTCTATATGACA
TCTATTTATCATAATGTTTTCTTTCTGCGGTTACCccttaaatcaatttt
tccCACGAGTAACTTGAAAGCTTGAATCTCattctaaataaagaaaattg
acGCGCGAGTTTTTGACATGGTGGACTTAAAACATTTCCTTTGCTCTTTT
TTAAGGGGAAATTCAAATTAGCTTAAACCAATTTCCATAGGATAACACTG
TATTGAACAGTGGTGTCGAAGTTTGTTATGACAGAATTTCTTGCTATAAA
AAGGGGTTCTATTTTCTGTTCAAAACGGATAGGCAAACTGTCTGGTGGAT
TTATGATGTGCtaaatgattatgtcaaaaggCGGTCACTAAAACCTTTAG
CATCAAATTTGCCTTCTGAAGCTTATTTGATATTCTTCGGTATTCATTTA
GTTTGACGGTAAACTTTCTCTTATCAACGATTTTTGCCGCTATGTAAGAG
GAGAACTTCCAAATAGACCGATTTCATTCCGCCCCAAGCAGCTTTTCGCT
TCGTTTCTCGTCCAAATTTCTCataaaatctttgttttaaGACTAAATGT
GTTCCCCAAAAGAACTATGGTAAAGTTATTTCAAAGTTTAGAAATTTGGg
tgattttgttgttttgtatcCTAGCATTTTTGTCATATTTCATTGTCAAA
TGAAAGCACCCCAACCTAGTTTGATGTCAAGAATTTGTATTTCATCTGTT
TTTAACTGTGACAGTGTTTTCTtatttcaccttttttttttttcttgtta
ccTTTTTCTCAGTGCCACTCTAAATCTTTGAAATCTCCTTCATTAAAACT
ATTCAGATACCGATAACTTTCCCATCTCAttcatttttgaaggaaaaatt
ccTGGTATATAAGCTCAGCAGTTGGTCCTTCTCTAGTCTgtatcgcagac
ctctatagatttGTTTCCTATAAAAACCTCTAGTCCTTCTCCTAGAAATT
ATTCCAATATACTtcatttttgaccaaaaaagttttttcaccttGACACT
TCAGTTGAATAGAAATTTGACTTAAATGGGTTTCACGCTCTAGGGGATAC
ATCCGAGTATATATTTATTGTATCAGATTGATTGGTGcatctttcaaaat
atcagacTTCCTGcattttttgattgaaactcTTCAATCTTGAAACGTGA
CCCAAATATGTAAACAATATGATTTTATGCAAATTAGGGGCAATCCGTAA
CCGTAGgattgtctttcttttttaagtTAGGCTCAAAGAGtcctcttttc
aaaaaaattaaaataggaGTTTCATTACGGCTACGGTTTAGGTTTTCCGC
GCGTACAAGTGTTAATTTTACGGCGGTTCCGTGTTAAAAGCCATTACGTC
ATGCCAATCACGAATAACGTGTGAATATGCTGCACAGAAAAATCACTTCC
CCCTTTTAATATCACTGTTGGAAATTCATAATACCTTCAATAAAAATGCT
ATGTTTTAAACAGAGTAAGACCACGGTGGTTCTTCCTCTTCACGGTATTA
TGTCAAAACGACCTTAATTTCCgtcaatgaaatatttcaaacattcaaat
taattccttttcttttttctcttctctatttttAGTACGGCAAAAGTTTC
ACGTGCGGATGTCAGAGAGGACTTTCATGCGCTTTAGTTGAAGTCAACGA
AGCTACAAACAGCCAAAAACATCGTTGTGTTAAAGTTCTACCGGACCTGA
AAGAGAAACGGAAGTCTAACGGGTCGACGTCTTTGGAAAAGGAAAAAGCA
ACGTTTACCGCGCAGCTTATCCGGGAATTATTAAGCCCGGATTTTTTATC
GGACACTTTGGATGAGGACGAAGAGAAGAAAGCTAcatgaatgttttttt
aaagttaaagaaaatGTGTTGTcgtttatttttaaatgaaagaattaaaa
gaaagaaCGTGGTACGACATGATTAAAGGACGTAGCACgacagaaaaagt
ttttttgacagGAAAGGAGATACGCGTAATCAACCTGCATAATACAATTG
TTAGCCTTCTTTTGATTGGATAATAAGTCGATAATGATGCATTGGTACGg
tatttgataaaatattttcctttggcaaaaatattttatgcgAGATATTA
TGAAATCACCCGAGAAATCTTTTAGCACTGAAGTATTTTGCTCTCAAAGT
CTGGAATACGAACAAAAATGAACCCTGTCTGACCATCATTGAAGGGATGA
ATTATGGTCTTCTGTTGAACCATATACAAATGAAATATTCAGTGAGAgcg
gaaatttttgaaaaaattttcaatcattttattttattaaaattttattt
gtttttgtttttatatattgaAGTATTCTTACACTGTGATCCCTTTCCAG
agttttagtacacatggtcaAATTCGGAATAATATCTTGTTATCTTAAGC
TGTAGTAACTTTATGGATTTTTTAGTTGATTCAAATATCATGGACATTAG
AAAGATGTCAAAAAAGATGTCGACAAAAGGCTAAGATTTAATATTTAACC
TCTGTTGT Coding sequence (CDS) from alignment at sc0000097_pilon:616754..620461+ >MSTRG.12715.10.p1 ID=MSTRG.12715.10.p1|Name=MSTRG.12715.10.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1386bp|location=Sequence derived from alignment at sc0000097_pilon:616754..620461+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGAATTGTTTGTGTCAGATAGTTATTGTATTTTTGGTATTGCCTTA
TACAGCAgcACGAGTGGCTTTTGGCAATATGCTTTGCAAGAAACAATCTG
ATTGTCAGGATAATCAATGTTGTGCTATGGTCGCTGTCGGCAAATCACGG
ACTGGATTTTGCATGCCTGCTAAACAACTCGGAGACAGATGCGCGCCGAC
ATTTATATACGGCAAAAGTTTCACGTGCGGATGTCAGAGAGGACTTTCAT
GCGCTTTAGTTGAAGTCAACGAAGCTACAAACAGCCAAAAACATCGTTGT
GTTAAAGTTCTACCGGACCTGAAAGAGAAACGGAAGTCTAACGGGTCGAC
GTCTTTGGAAAAGGAAAAAGCAACGTTTACCGCGCAGCTTATCCGGGAAT
TATTAAGCCCGGATTTTTTATCGGACACTTTGGATGAGGACGAAGAGAAG
AAAGCTAcatgaATGAAGAATTGTTTGTGTCAGATAGTTATTGTATTTTT
GGTATTGCCTTATACAGCAgcACGAGTGGCTTTTGGCAATATGCTTTGCA
AGAAACAATCTGATTGTCAGGATAATCAATGTTGTGCTATGGTCGCTGTC
GGCAAATCACGGACTGGATTTTGCATGCCTGCTAAACAACTCGGAGACAG
ATGCGCGCCGACATTTATATACGGCAAAAGTTTCACGTGCGGATGTCAGA
GAGGACTTTCATGCGCTTTAGTTGAAGTCAACGAAGCTACAAACAGCCAA
AAACATCGTTGTGTTAAAGTTCTACCGGACCTGAAAGAGAAACGGAAGTC
TAACGGGTCGACGTCTTTGGAAAAGGAAAAAGCAACGTTTACCGCGCAGC
TTATCCGGGAATTATTAAGCCCGGATTTTTTATCGGACACTTTGGATGAG
GACGAAGAGAAGAAAGCTAcatgaATGAAGAATTGTTTGTGTCAGATAGT
TATTGTATTTTTGGTATTGCCTTATACAGCAgcACGAGTGGCTTTTGGCA
ATATGCTTTGCAAGAAACAATCTGATTGTCAGGATAATCAATGTTGTGCT
ATGGTCGCTGTCGGCAAATCACGGACTGGATTTTGCATGCCTGCTAAACA
ACTCGGAGACAGATGCGCGCCGACATTTATATACGGCAAAAGTTTCACGT
GCGGATGTCAGAGAGGACTTTCATGCGCTTTAGTTGAAGTCAACGAAGCT
ACAAACAGCCAAAAACATCGTTGTGTTAAAGTTCTACCGGACCTGAAAGA
GAAACGGAAGTCTAACGGGTCGACGTCTTTGGAAAAGGAAAAAGCAACGT
TTACCGCGCAGCTTATCCGGGAATTATTAAGCCCGGATTTTTTATCGGAC
ACTTTGGATGAGGACGAAGAGAAGAAAGCTAcatga
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000097_pilon | genome | sc0000097_pilon:616754..620461 + |
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