MSTRG.12699.1.p1 (mRNA) -

Overview
NameMSTRG.12699.1.p1
Unique NameMSTRG.12699.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000097_pilon:296564..298276-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.12699.1.p1 ID=MSTRG.12699.1.p1|Name=MSTRG.12699.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1713bp|location=Sequence derived from alignment at sc0000097_pilon:296564..298276- (Clytia hemisphaerica_ch_hm2_pilon)
ATCAAATGTTCCAGGAAATAATAATATGACACCTTAAGGTTGACAAAAAA
GGGTGAAGTCGCCAAATTAGGTAAACAAAAAGGTCCAATTCTGAATGAAT
ATTGTAATATTGGAGTTGCTGAATTTTATAACTATTGCTAAATGGTTAGA
CAGTTTTACGTAATATAGCATATATTGTTCCTGGAAAATATTTCCCTTGA
TTAGCACAATTCTTTTCACCTATATAACACTTAGATATAAAATCGATCAA
GTGAAAAAGAAATTTATTAAAGAATCAGAAGTCGAAAAACATTCGGTTGA
TGAGAAAGAAGTGAAGATCGAGAGAACAAAATTGGGAACGAAGATACGCG
ATACACATCAAGATTTCTGAGTCTTGATTTAAGAATAAAATAATAAGAGA
TTCGTCCTTTGCTTATGGATTTGAGCAAATTGAAAAGTAAAGTTGAAATT
GGACCATTGCCAAACGTTGTTATATTCTTTGAGACTTTTCACAATGCATT
AGTACAAGATTTCAATAAGAAAATTGATGACATTGGAGAAACTTGGACTG
AAACGAAAGACGCCATTGGAAATTTAAAAGTGGCTTCTAAAGAAGTACTT
CGCGTCCGCGGTGAAACCGCGCGACGGATTGAAGAAAGAGATTACTGGAA
ACAGGTAAAGTCAATGTATATTTCAATTTCTCCTTTCATCTGGTCCGTCC
GAAATTTAAGTTCCACTACAATTAGAGAAAACATTTATCAATCTTGACAT
TTTACGTGGTACTTTGAGTTCTGCAAGGGATAAAGGCTTGGAATGTCGAA
ATTTTTGTCTCGGTCGTTTGAATCATTTCTAATGTTATATAAAGATAAAA
AGTTATGGTTTTATGAAACATACACTGACATCGTTAAAAAAAGTTTGGTA
AATTAGAAGAATATTCTAAATTTCGACTGATTTGATTTAACAGCCTCAAT
AGCGTAGACAGAATGCCCCTCCTGGTCTACACTTTACTGAGCCTTGTTGG
ATTTCATGCTTTGCTGAACAAAACGGGGAGCAGGAGTTCCTGTTCTGTTC
AACAAGGTATGGAAATTGAAATTCCTATTTACACGACCAGTCATTTGTAC
GAGAAAAACTGACCCATTCTTATAATTTCTTCACTTTTTATTTTGTAGCT
TTACGAAAAAGAAAAAGCTGAGAAAGAAGAAGCATACAAACGAGTAGATG
AAATTAAAAACGAACTCTTAAAAGTCAAAGAAGACAAGAAGGTTAAAAAT
GAATACATTCTGATTAACAATGAGAATCTGGTCCGTAAATTACACGAAGA
GAGACAATTACGGTTAGGATTAATAGACGATATGCTTGATTCAAGAAGTT
TTATAAACCAAGCGAAAATGTCACAGAAGAAGGAATTATTATCAGACTTA
AGAGAACAATGCATCACTGACATTGAAAAAATGAAGCTCTCCACCAAAAC
ACGAAAAATCTCTTTATCGCCAAAGAAGGCTTCGTTTGTATGATGGATGG
ACGGATGGGCGGATGGAATTCCTAACAACTATTTTTTGATGATATCAGCA
AATGCTACTTTTATCATATTTTTATCATAGATTTTAAATTTATAAATGTA
AAAGAACAAACTTAAAAGAGCAAATTTGTTTATTTTTAAGTAAAGATGAT
TGATCTATGTCATCTATGGTAAAATCAGTGGAAGACAGGTAGGTAGATAG
ATAGACAGACAGA

Coding sequence (CDS) from alignment at sc0000097_pilon:296564..298276-

>MSTRG.12699.1.p1 ID=MSTRG.12699.1.p1|Name=MSTRG.12699.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1170bp|location=Sequence derived from alignment at sc0000097_pilon:296564..298276- (Clytia hemisphaerica_ch_hm2_pilon)
CTTTACGAAAAAGAAAAAGCTGAGAAAGAAGAAGCATACAAACGAGTAGA
TGAAATTAAAAACGAACTCTTAAAAGTCAAAGAAGACAAGAAGGTTAAAA
ATGAATACATTCTGATTAACAATGAGAATCTGGTCCGTAAATTACACGAA
GAGAGACAATTACGGTTAGGATTAATAGACGATATGCTTGATTCAAGAAG
TTTTATAAACCAAGCGAAAATGTCACAGAAGAAGGAATTATTATCAGACT
TAAGAGAACAATGCATCACTGACATTGAAAAAATGAAGCTCTCCACCAAA
ACACGAAAAATCTCTTTATCGCCAAAGAAGGCTTCGTTTGTATGAATGGA
TTTGAGCAAATTGAAAAGTAAAGTTGAAATTGGACCATTGCCAAACGTTG
TTATATTCTTTGAGACTTTTCACAATGCATTAGTACAAGATTTCAATAAG
AAAATTGATGACATTGGAGAAACTTGGACTGAAACGAAAGACGCCATTGG
AAATTTAAAAGTGGCTTCTAAAGAAGTACTTCGCGTCCGCGGTGAAACCG
CGCGACGGATTGAAGAAAGAGATTACTGGAAACAGCTTTACGAAAAAGAA
AAAGCTGAGAAAGAAGAAGCATACAAACGAGTAGATGAAATTAAAAACGA
ACTCTTAAAAGTCAAAGAAGACAAGAAGGTTAAAAATGAATACATTCTGA
TTAACAATGAGAATCTGGTCCGTAAATTACACGAAGAGAGACAATTACGG
TTAGGATTAATAGACGATATGCTTGATTCAAGAAGTTTTATAAACCAAGC
GAAAATGTCACAGAAGAAGGAATTATTATCAGACTTAAGAGAACAATGCA
TCACTGACATTGAAAAAATGAAGCTCTCCACCAAAACACGAAAAATCTCT
TTATCGCCAAAGAAGGCTTCGTTTGTATGAATGGATTTGAGCAAATTGAA
AAGTAAAGTTGAAATTGGACCATTGCCAAACGTTGTTATATTCTTTGAGA
CTTTTCACAATGCATTAGTACAAGATTTCAATAAGAAAATTGATGACATT
GGAGAAACTTGGACTGAAACGAAAGACGCCATTGGAAATTTAAAAGTGGC
TTCTAAAGAAGTACTTCGCGTCCGCGGTGAAACCGCGCGACGGATTGAAG
AAAGAGATTACTGGAAACAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.12699MSTRG.12699Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12699.1.p1.exon2MSTRG.12699.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.12699.1.p1.exon1MSTRG.12699.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12699.1.p1MSTRG.12699.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000097_pilongenomesc0000097_pilon:296564..298276 -