MSTRG.12687.1.p1 (mRNA) -

Overview
NameMSTRG.12687.1.p1
Unique NameMSTRG.12687.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000097_pilon:126510..127997+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.12687.1.p1 ID=MSTRG.12687.1.p1|Name=MSTRG.12687.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1488bp|location=Sequence derived from alignment at sc0000097_pilon:126510..127997+ (Clytia hemisphaerica_ch_hm2_pilon)
CGGATATCGAAACTCTCGGCCGGATGTTTGAGATTACCGGCCGGGAGAGT GTTATCCCGGCCGGGAGTTAGTTATAGTTTCTGGTCTGCAAAATTCACAT TCAAAATCAGGAAGATGGTAGAAAGATGGAAACACAGCGACCAGACAGTC AGCAGGTCAGATGCTCCTCTCAGATGATTGATGATGGATTTCATATTACC TAAACAAGTTCTGTTGGATAAAAAGCAGTTGCTTACTTACTATTATAATG TTAGACCGAAACTCAAATATTCAATTATATGCATGATTATGAATCAGCAT CATGAAGTACCAACAACAGAAAGACAAATGAGagattttttccagaaaaa taatttgacaagaaaaagaaatgtttcAGAGCAAACAGTGCTTGAAATGA TCTCACTTGAACTTGAAACTTCTGCCAAATCTTTTGGATATCGTCAAATG ACAGATTACCTCTCCATCAAATACAAAGTAAATATTTCACGAGAACTTGT TCGTCAAACACTAAAAGAAGTTGATCCTGAAGGTGTGCTAGAGAGAAGAA ATAGAACAATCAGACGAAGAATATATGACACAAATGGACCGTTAGATGTT GTTCACATTGATGGCAATGATAAACTTAAGAGATTTGGTTTTGCTATTCA TGGCTGTATGGATGGCTTTAGTCGTAAATTGCTTTGGTTGAAAGTATGCA CAACCAATAACGATCCCTTGGTTATTGTGAACTATTATTTACAGTTCTTG AGACGATACAAAATGGTACCACAGTTATTGAGGATGGATAAAGgtactga aaatatttattgtagagatcttcaattatttttcacaaactcTGAAACAA GTTTCTTGAATGCAGCTTCAACCAGGAATCAAAGAATTGAATCTTATTGG TCGcgcttaaaaaaatttaaactttcttGGTGGATAAAGTATTTTGATAC TCTTATTAGAGAATTTATTTATACTCcatcaaacaatttccatgttGAAG CACTGCTGTTCTGCTTTATGCCAGTAATACAGTCTGAGttaaatgaaagt ttgaaactgTGGAATTCTCGAAACATTAGACAATCTTCCAGGGCACCTGG AGGTATACCTGATATTCTCTTTAATATTCCTGCCTCTGTTGGTTTTGAAA ATCAAGGCTTAATTGCTAGGGAAATTGATATTGTTGCTGCTGAAGAAAGA TTTGGAATACAGTACCCGCCAATGTGCAAAAATGAAGATACATGGGAGTT GTTATACTGTTACACACAAATTCATGGGTTGGAGTGCCCTAGAGACCCAG AGTCAGCATTGGATCTATTCACAAATCTATTACAGTTCTTACAAAATGAT GGATTTAATGTGTAATGTTTTGAAGCGATATAGTGTCACTTTTCTTATTC TACTAATTTCTTGGTAAAGAAATTAAGGAAtctattttctgccatcaaTC AGGGTTACTTTCATAAACAAAGGGTAACTTAACTTttg

Coding sequence (CDS) from alignment at sc0000097_pilon:126510..127997+

>MSTRG.12687.1.p1 ID=MSTRG.12687.1.p1|Name=MSTRG.12687.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1185bp|location=Sequence derived from alignment at sc0000097_pilon:126510..127997+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGGATTTCATATTACCTAAACAAGTTCTGTTGGATAAAAAGCAGTT
GCTTACTTACTATTATAATGTTAGACCGAAACTCAAATATTCAATTATAT
GCATGATTATGAATCAGCATCATGAAGTACCAACAACAGAAAGACAAATG
AGagattttttccagaaaaataatttgacaagaaaaagaaatgtttcAGA
GCAAACAGTGCTTGAAATGATCTCACTTGAACTTGAAACTTCTGCCAAAT
CTTTTGGATATCGTCAAATGACAGATTACCTCTCCATCAAATACAAAGTA
AATATTTCACGAGAACTTGTTCGTCAAACACTAAAAGAAGTTGATCCTGA
AGGTGTGCTAGAGAGAAGAAATAGAACAATCAGACGAAGAATATATGACA
CAAATGGACCGTTAGATGTTGTTCACATTGATGGCAATGATAAACTTAAG
AGATTTGGTTTTGCTATTCATGGCTGTATGGATGGCTTTAGTCGTAAATT
GCTTTGGTTGAAAGTATGCACAACCAATAACGATCCCTTGGTTATTGTGA
ACTATTATTTACAGTTCTTGAGACGATACAAAATGGTACCACAGTTATTG
AGGATGGATAAAGgtactgaaaatatttattgtagagatcttcaattatt
tttcacaaactcTGAAACAAGTTTCTTGAATGCAGCTTCAACCAGGAATC
AAAGAATTGAATCTTATTGGTCGcgcttaaaaaaatttaaactttcttGG
TGGATAAAGTATTTTGATACTCTTATTAGAGAATTTATTTATACTCcatc
aaacaatttccatgttGAAGCACTGCTGTTCTGCTTTATGCCAGTAATAC
AGTCTGAGttaaatgaaagtttgaaactgTGGAATTCTCGAAACATTAGA
CAATCTTCCAGGGCACCTGGAGGTATACCTGATATTCTCTTTAATATTCC
TGCCTCTGTTGGTTTTGAAAATCAAGGCTTAATTGCTAGGGAAATTGATA
TTGTTGCTGCTGAAGAAAGATTTGGAATACAGTACCCGCCAATGTGCAAA
AATGAAGATACATGGGAGTTGTTATACTGTTACACACAAATTCATGGGTT
GGAGTGCCCTAGAGACCCAGAGTCAGCATTGGATCTATTCACAAATCTAT
TACAGTTCTTACAAAATGATGGATTTAATGTGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.12687MSTRG.12687Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12687.1.p1.exon1MSTRG.12687.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12687.1.p1MSTRG.12687.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000097_pilongenomesc0000097_pilon:126510..127997 +