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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000096_pilon:1209061..1211496- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12675.1.p1 ID=MSTRG.12675.1.p1|Name=MSTRG.12675.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2436bp|location=Sequence derived from alignment at sc0000096_pilon:1209061..1211496- (Clytia hemisphaerica_ch_hm2_pilon)
GCGTAGTAAGCATAAATAGAGAGAGAGAGTTTCTAAGAAAGAAATCAGTT
CAGACAAGTATAGAACCAGTCAACGACGGCTGTAGGAAACGGTATAAATA
AAGGACATAAAGATCCACCAACAAATCACTAGTCACTTAAAGAGGTTACA
GTAAGAGTTCAAGGCTTGAAGCATCTACGCCGCGCAGCTGAAGAAAAATA
TTTCAAGAACACAGCAAAGGAAAACATTAGAAAAGAAGAAGAAACACGAT
TTGTATTTGTGTGTACTGCATACACTTAAATTGAAGAAGTTGCAGTACCA
AAATTAAAGAAAAAATTGAAAAGACACCTACTAAAGATATCACATTCCTG
GCAGCAAAATACGACAAAGCCGAGCGGAGAAATCTAAAACATAGAGCATT
GATATAGGTCACTATCGATATTAAAATTAATCGCATGCCGCCGAGTTGGA
TTGCATTTGAACATAAACAGTATCATATTTATTTTCCGTTTCTAAACAAA
GGGGATTAACCACACCATACAAACAAGAAAGAAATCGCGTCCGGATATTT
TTCAAGAGTAGTATAAATACCATTGCCGTCTATTGGAGAAAGACATTTTA
CAGCGCGACTTTTGTCAAAAGCATTTCTATACATTAGTATAGAAGAAGCA
TTTTTGTACATTAACAGCGACCGTACAGAGGCAGCAGCGACCAGACGACA
AAGTCGAACAAGATTTTGAGGTCTGTGATTTTATAGCGATATAATGAGGA
AAACACCAAAGTTAGCTCGAAGCCCAAAAGGCGAAGTTACTCCATATTAC
GATGTAGCCGTTTTAGGAGAAACAGCTTGTGGTAAATCAAGTATCATCGA
ACGATTAGTTAATGGATCATTCACACAAACTTATACACCGACAGCAGCTG
AAGTTCACATGACAACTCTTCATGAAGACAATAGACGAGTTGCTTGTTTA
CAATTATTCGATACTGCAGGTGGATTTGAATTTCCAATGATGCTTCGATT
AACCATCACAAAATGCCAAGCTTTTGTTGTTGTTTATTCAGTCGGAGCAT
CAAAATCATTGGAAGTAGCAAAGAAACTTATCGCAGAAGTTAGCGAACAA
AAAGGACAGAATTTCCCTTGTGTTTTAGTTGGGAACAAAAAAGACTTGGA
ATTAACGGGAGAGCGTGAAGTAAGTTTTGAGAAAGGACTTCAAACGGCGG
TACAACATGGTTGCTCTTATATTGAAGTCTCAGCGAAGGACGATGAAAAT
ATTACAGAAACATTTATAACGATGGTCAAGAAAATTGGATATACGGCGAC
CATCAAACGAAGATTATTTGCAGAACAAAGAATGAAGGCTAAAAACACTC
CACAACAACAAAGAAAAAAAGGCGTTAAATCATTCTTACTAAATCTATCG
AACAGTTTTAGCTCTGATAGTTCTTCTGACTCAGATTCAGATTAAAAACT
TTGCATACAAAACCCTCTTAGATTGATATGAATCATTGAGACATACTTGA
TAACTCAAACAAAAACAACAGAGTTTTCTATGGAAACTTGGGCACGTCCT
CTGCTAGTGTTTAAAATTTTAGGATTTTCAGTTTCAGCATGTATCTAATA
ATTTTGCCAAATTAGTCAGAGTTCAAGCATGAAGGCAGACTTTTGTTTTC
TAACTTTATCAAAGGAACATAAAATAGCCAAGTTTTTGGTCAATCTATAG
AGAGAGAGGGCATTGACGACAAACAATCTTTGTTTGTATACACTTCAAAA
ATAGGGCTTGGATTTCGACATACATCTTGCTAATTGTAGTAGGTAGGTAA
TTCATTCTAACCATAAGACTAGATTTACACTTAGTCGCCACGATTTCCTT
TTTACGATGAAAATTTAATTTCCAAAATTGATCTAAAACGGAAGATACAG
CTTTCCTTTAAGTTTAGATTGTGTTGAATATTTTGTTATCGATTCTTGCT
AGAAGATTTTGCGACCTTAAAAGATTTTTTTTCAAAATGTAAATCAAGCT
TTAAGTAGATATTACCGATCGAAAAATACTCTTGAAACATGAATGGGCTC
GTGTAACTTGACACTAAACATAGTCAATCGTCATCAAATTGGCGCGTGTT
CAGGAAAACAATAGTATTATGGAATGTCGATTTTTAAGTACCTCTCCAAA
GGTATCAGGGTTTTCTGTTCTTACAAAAATAGAAATAAACCTCTCACCCT
GGGTTTCTATTGTTCATGACTTGAGACTTTACGATAAATTTTGTAATATT
TTCATTTTCCTGTATATATGTAAATTATGATAAAAGTATTTTAACTTGTT
ATTTTTAACATTTCTTGGGGAAAGATTTTTTACTTTCACATCAACAAAAC
TACACATATTTTATTGAATTATTCCATTCCCTAGACAAAAATTGATCTTA
ACCGCAACTAATTGATGGATTAATGAGATGAAATAC Coding sequence (CDS) from alignment at sc0000096_pilon:1209061..1211496- >MSTRG.12675.1.p1 ID=MSTRG.12675.1.p1|Name=MSTRG.12675.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=702bp|location=Sequence derived from alignment at sc0000096_pilon:1209061..1211496- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGGAAAACACCAAAGTTAGCTCGAAGCCCAAAAGGCGAAGTTACTCC
ATATTACGATGTAGCCGTTTTAGGAGAAACAGCTTGTGGTAAATCAAGTA
TCATCGAACGATTAGTTAATGGATCATTCACACAAACTTATACACCGACA
GCAGCTGAAGTTCACATGACAACTCTTCATGAAGACAATAGACGAGTTGC
TTGTTTACAATTATTCGATACTGCAGGTGGATTTGAATTTCCAATGATGC
TTCGATTAACCATCACAAAATGCCAAGCTTTTGTTGTTGTTTATTCAGTC
GGAGCATCAAAATCATTGGAAGTAGCAAAGAAACTTATCGCAGAAGTTAG
CGAACAAAAAGGACAGAATTTCCCTTGTGTTTTAGTTGGGAACAAAAAAG
ACTTGGAATTAACGGGAGAGCGTGAAGTAAGTTTTGAGAAAGGACTTCAA
ACGGCGGTACAACATGGTTGCTCTTATATTGAAGTCTCAGCGAAGGACGA
TGAAAATATTACAGAAACATTTATAACGATGGTCAAGAAAATTGGATATA
CGGCGACCATCAAACGAAGATTATTTGCAGAACAAAGAATGAAGGCTAAA
AACACTCCACAACAACAAAGAAAAAAAGGCGTTAAATCATTCTTACTAAA
TCTATCGAACAGTTTTAGCTCTGATAGTTCTTCTGACTCAGATTCAGATT
AA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000096_pilon | genome | sc0000096_pilon:1209061..1211496 - |
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