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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000096_pilon:875992..883877+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12661.1.p2 ID=MSTRG.12661.1.p2|Name=MSTRG.12661.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7886bp|location=Sequence derived from alignment at sc0000096_pilon:875992..883877+ (Clytia hemisphaerica_ch_hm2_pilon)
CCTCAAAAGCTTACCAATCTAAGGAGTGATaggtcttttttattttattt
ctgttATATTACAGGACGTGGAAAGAACTACAAGGGGCGAACTCGCCATT
TCACCTCAGCAGAAGAAATTGATCGCCAGATGAACGATGACAAATGGAGG
GTGAGTGTTATGAAGCAATatgatatgaaaaaaataaaatttgtatttta
tttagatactaaagtttatttatcattttttcatacataaaaattattta
ctttactttCCTGTTCATTTTAGAAAACAAGAGAAGAAGCTGAAGATTCT
GAAGAATCTGATTCTGACGAGGTTTGAgatggaaaaaaattcatattttc
tttttattattatttctaaTTTGATGCTTTGCgtgtttttaaaaagtgaa
tttGTGTCAGCATGAAAATTTGGAAGGCTTGCTTCTTTCTGTGTTGGTAG
GGTTGCTTTCTGTCTGATAACGAATCTCAACTTGAAGCTGTGGTACATTC
AGTTAGGCGCTGTGTTAAAGGTATAGCGGCCATTGACTTGCTGTTGCTAC
ACAGGTAGCTGAAGTTTGATTCCCACTCGCTGGAgatcacttggcaagtg
aatgaacctttaCCTGAcagggcgctcattgaaagtcACTGTAGTTGTGA
AAATGGGCATCAGAGCCCCCTACAACTCAACCAATAGAATAGAAATAGAT
TTAAACAAAGATCATAACTAactgataaattttttttctgtaatattatt
tttataggaAGAGGGGGGTAAGAAAGGAGGTGTCATTGACATTGCAAATC
CTAATCgagttcaaaataaaatgaagaaagttACAGAGCTTGAGGATGGA
GATCAATCTGGAAAACCAGAATTGACCAGAAGGGAAAGgtataatttttt
gtaaaaatacacgtggttctttttgttttattattattattgtcttTATA
TAATCATAGCattatgataaaattttctGATTCATGATTTATTATGATGT
TGTTTCCTTTTTGATAGCATTTACAATGGGGTTGTATTTTCTATTCTATA
CTTTTTATGATTGTTGTGGTTGGTTTTAccaattatttttagttttcaat
atGTTACATTACTAGGgctattttcatcttcaatgtATTTTTCTAGGGAA
GCAATAGAAAAAGAACAAGCCAGACAGAAGTATGAAAAATTACATGCTGA
AGGCAAGACAGACGAAGCCAGAGCTGATTTAGCACGGTTAGCAATCGTCA
AGAAGCAACGAGAAGAAGCTGCTAAGAAAAAGGATCAAGAAAAGAAAGGT
TATTATAATAACACTACTGAAACCACTTttgatgagattttttttttctt
gctgCTTTCCATTGTACTGTTTGGCTCTGCTCtcgattttaaaagaaatt
gtcagGAAGAATGATTGacattaggcgagaccaatttaatttgttgttct
acgggcccgaccgaccctatttttgctaaattcaaaaaaataataatatt
gaatttccaatacaatatattttacacactagttgtttgtaagaatcaaa
tttgaataaagctgaaaattaattcaagaaattgaaaaatttagaaaatc
aagcattccgtacactaagattttatcatgatcttaatcaaagattaaaa
aaatgaatttttgaaccagatgttttttggaaaacattttcggtacttta
acaaccctgataaatgaaaaatttatttttattttaccgaccgaccgacc
catattttgctaacgatctgcccgtagaacaacaaattaaattggtctca
ccTTATTGACACAATGTTCTTCCGACCAAGGCACAAAAGAGAAAATTCTT
CTCTAATCTTTACCATATACATCAGGTTAAAAAAGGATTCTTATCTCATT
TAGGAGATGGggttcaatttcaaaacataattttctgGTTGTTTCtgatg
tgaattttttttctggcaAGAGATTTGATTAAGCTGTAGAATAAAGCAAC
ACAATATCTATCAAATCTCATTCTCCCTCTAACTCCATCATCATATCACT
TTTTAGATAAAGAGGCTAAACTAGTTGAAGCTGAAAAAGCAAGAAAAGCT
GCAATGGAAGCACAAGCTAGTGCTCCTAAACCTGGTGGTCGAAAGAGAGG
GAAACGGTGATCTTGTGAAAAGTCATCTTGGAAAGTCATGTCAACGAAAG
AATTTGCCCGGAACACTCCCAGCTGAACAGACAGAGCTTCAAAATGGTGA
ATGGTTTCATCTTAAATACTCGTCGATTGATCAAAGTTCACAGGGGAATG
TTGAGGAgtgcaaatattttttctatgaAAGAATTCAATTTTGGTTTTGG
AAATAGAGATCAAGtttttttCTCTAATGCAATTTAATTAATATTATTTA
AATAATAGTGTTACTTAAAATACTtggaaaagatattttttgtacatgtg
tttttttttttgaatttcctgaTTTCTGCTCAAAACCTGAACTTACTTTT
gaataagtttttttgaaaccttctacaaaatttcatatttttttccagtt
aaaagaattgaaaaaagtaaataaagtaaaaaagattgaaattacAACAC
TAAATGGAAGATTCAGAATTGCTCGAAGATTTGAAATGTGGGATTTGCTT
GGAGTTACTGGTGGACCCAACTTCATTATCTTGTGGACACACAGTTTGCC
GCTATTGTCTTGCTCAATGGTGGGTTAAATCCAGGAAGCGTATCTGTCCT
CAATGTCGCCAGCAATGGTCAGGATTTCCAAAAGTTAATGTTACACTAAG
GTGTGTCAATTATTTCGTGAAATATTGCTTGTGAACTGTTTTAAGTGTCT
CTTTGAGTCGTTgagaaattttgatgttcaGCCTTGCTTTTCCGCTGTTC
TCCCAGTGACGACACTTATGTGTTAATGTATACATTATATGGTTAAGTCC
CAAAGTATCAGTAATCCTGTCAACTTTTCTGACATTAACTGAATGTTGAT
AATTGACAGGCAACTGGAGAACTAATTTTGATCTACCTTATTACAGCAAA
ATAAGTAGACACATGATTGGCGGCCTTGAAATTAGCatgcaaaaaatttt
atttgctttttcaaggacaccactgCTGGTTTTCATTAAAAGAGTTTTAA
TTAACACAAAATTTCTTAATTCACGTTAATTCCTTGTCTATTATTTTTGT
GTAATAAGTTATTTATAAAAAGCTGAGTAGGCAATGTAATAGAACATGCA
TTAGTTTAAGTCTTTTGATTGCCTTTTAGAAATACCATCGTATCTCTATA
CAAATCACAGTCCAAGGAAAAACTAGACTCACTGAAAAGTGATCCTACAT
ATGATGATATAATGAATAAGTTTGAATTGTTGGGAAATGTTGAAAATAGA
AACTCCAGGAATAATAACAGCAGATTCTCGTGGACTGGATTTTGCATATT
GTTTGCAATAGCAGTTGGCCTTGTTGTGGTTAGTGAACAAGCTAATGGCT
TATTTTACTAATTAATTTATCACTTGATAGAAAAACCCCTATTGAAGCTC
CctttcaaaattctttgaatcCGTACTTTAACTCTCCAGACAGCtttttt
aaaaaggattttgagatttttctgtTCTCTATACAAATCAGTATATTTTT
AATCAAGAATGATGTTAATGTGAAATTTGAATTAATATTCTCGGTATAAT
TGATAATCTTCACTTACTTTGTATTTTTGCCAATCTTTTTGATACAACTT
TGTTTATTCAGATTGTTTCTCTTGGCTTCAAAAACATGGGTGGGTTGTCC
AAAGAAAGTTTGAAATCAAAAGCTCTTGAACATTGGACTGTGCATGATGT
TGGCTTTTGGGTTGGAACTCTTGGTGATTGGGCTTctgtttatcaaaata
attttgttaatgCAGGTAGTTAAATTGCTTTTATTTCACATAAGGACATT
GGTTTGATACCCTACTTTCCTTTGGGTCACATATCATTATTTACCAGCCT
TGTTTGTCCCTCTTTTAATAACTTATCAGATAATAAAAGTTTAGACACCC
TTCCCAATAATCTGGTCAGTTCAATACAGATTTCAAAGTTGTATTTTACA
GGCATCAATGGAGACCTTTTGGGATTATTTTCAAACCATGCAGAATTGGA
GGATCCAAAAATTAACATGACTGTCAAAATACATCAAACCAAATTCCTGA
ACGAATTGAAAATTCTAAAGGAAACATTACCTGCTTCCTCTTTTGATATT
TGGAGCTACAAGGTGAGAGTATGACCATTTTTGGCAAACAACTTTAAACA
CCTAGAGAAATCACCAGCTTTAAGGCTTGTCTcaacttgcgcgcgctgcg
atcgcactttttcgagcaaagcacgctattggtcaaaagaaaaacaaagc
aaTTCCATTAGCGCGATCtaacgtaacggttgaaaaaagttgaaatgtgt
tcaactttttttcgagtacgcgctacatttttataacataatcctttttc
caagcaaaaaggattgaagccaaaaagtgtgATTGCAGCGCGCGCAGGTG
GATACCGGCCTTTATACTCAGAATATACTCATACGAAAAAATTCCTTcgt
ttcatcaattttttgcttCTGAAATATATTGTGCAATGAAATGATTAAAG
TCACTTTCTTGGAAAGAAATGATAAGATTTACTCTGATTAGTAGTTGAAG
TTTATCACTATCAGCTCACTAACTCACATCTTTAATCTTCTCATGCTTAA
TCTTATtgtatcaaaaaaaaacttactatGATTTTTCACCTTGTTGTAGG
AACGGAAGAATGAAATGGCAATGTTTATAATGCTTGGTGTGCGAGAATTT
CCACGTGCAACTGTTGTATATTTATACCTGTTCAACTATTGGGATACTTT
CCTACCCtttttttCTGCATGTGTTAAACACGAGGAAGACTATACTACTA
AACAACTCATCGATTTGGTAAGTGCAacgtaagaacaaactatataagaa
catatctctttaatagccaaaatattaagaacaagttaagaatattttaa
gactttgtggacTCTTAAACACTCGATTGGTGcttcttttttgacagcct
ttttcttcatggatttttccacttaccctttttacttATCGAACATTGAG
TACCATTTTTGAAGCATTAATTGGGATTGAATCCACAACACTGTGCACCA
ATGAAGTATAATCCCGAAGAGCTAGAAtcaaatctttaacctttctcagg
caagaaaaagtgaagcctttaaaaatatgcgccgtatttttgatgacgga
ttgaatctaacgattcctttgttttcgagtgttattattttcgaaattta
tgtgtaagttttagtttcaatctgtcgtttttgtaaaaaaaaatagacAG
ACCGCGCTAGACCGCGCAACTTTGTTTCGATTtggttggcttcaaatcct
accaaggagattcgattctagctcTTTGGGATTATACTTCATTGCTGTGC
ACCTCCTGCCTTTAAGATTTCTGCCTTATTCCTTCAAGCTAAGAAGTTAC
CTCTTTTTGTACGCACtaaaaaagttgtctttttaatATTAAAGGATGAG
AACCCAACTGTAAACCAATGGTTGGAGTTTATACCTTGGCTCATTATTGC
GCCTTATGGTTTGATCGCCAAATTTGCATACAACTTTTTAGAGCAACACT
ATTGGACCTCACGAGTGGTCATCATGCATGCTTTCTTTATGACTCTAACT
GAATTTGCAAAGTATCCTGGTATTGTTTCATCACGTGATGCAAGGTTTGA
TTATTTTACCCATTGTTGGTGTCCCTTTAGAGAACACACAATAAAAGCCT
TTTTATAATATTGACTGGAGGCTCAAGGAATGCAGattttttgttgtgac
ttttgtgattttaagacagtattttataataagaaatattttaattttat
cttcattttatttCAGACGGGTGCACATCAAAGCGTTGAAATACTTTGGT
TTCGTCCTCATCTcatcatttttcttcaaaatcttcTGGTCTTTCATTCC
AATGTTCATTGCTGATTGTATCTTCTACTGGATGTTGTATGTCAGCCCAT
TTGATGCTGCTAATAGGCTCATAAAAAGGTATTGCTGTAACtcggtctaa
tgtcgacatccctcttctaatcccGACactcttctttagagataggaata
gtaGAAAGATCGGAATCCACTTATGGGaactatatttctttgcttagcga
ccggagaggaaaaaatcttttgtctatcagtgattctgaccttactATTG
TTCCCATCTCTAAAActgggtgtcagaattagaagagggatgttgacagt
agactaggctgcacgcatcccctctgatatgatttgatataggggatgcg
tatcgtctaaGATATTACTGTCCCagcttacccccgtcttttcttttctc
ttttttgattatgtgtCACATCTGTACAACgacttctctttttctttgtt
taatgaatgaaaatttataattatgaaagcaataacacaatgacgtcatt
tttctctttctgtgaTTGGATGTaacaaaattatgtaaatttatgcaact
ttcggttaccccaaatttgaggtaactctcggacgagaatttcatacacg
ttacgcatcccctataacaaaataaattctggggatgcgtgcagcctaac
aGTAGACTAACTTACGATAGTGGTCACAAAGTATCTGTGGTCAGGTAGCT
CATTTGGTAAAGCATTCGCCTTGCAACCCAAGGGTTGTGTTGTACATCAT
GCTCATTTATACATGCGCATAAATGCGAGTTTAGACTCCCCTGTTTGTTT
GGTTAGAAATTTAAATAacgtttttttgtttctgttaatattattgttgt
tgttctCTGTTGAAAATGACCACTACTGGGAGCTTTTCTTTTGCTGCTTT
ATAAACCTACTGACTTCTTCAGAGTATGTATAAACTCGTAACGTATTATC
GTACAttgtaatgtttttattttaatcaaAAGGATGTTCAGAGCACGAAG
AGTTGAAGATCATGCAGCAAGTGATGAGCAGGTGGTGGATGATACAGGAA
CTGAAGTTCATcaacaccaacaccaacaccatcaccaacaacaacaacaa
caacaacaacaacaacaacaacaacaacaacaagctgGCGGTAGTCGTGG
ATGGCATTTCAATTTCCACTGGAGCTCCCATGATCATTAAAAGTCTTTAG
ACTTATAACTTGATGTTATAAAAACACCACAGAAAGGCATTGGTTCCTTT
CCCGTTTCTTGCCCATAACACGTCGAAACAATGTTGCCTGTCTTTGTAGC
TAATATTACGTgtcttgttttaaaaaattcataacTTTGGACtttttttC
GCATAATACAACCTCAGGGTCTTGCTTGTTAATTTTCTTCAGCCTATAAA
TAtggttttttatttcattatctGGCACGAAGACGAAGGTTTGATTGCAA
CACTTCACACCattatccattgttttcaagtttaGTATTTTTTAACCGCG
GTTTTGTAACAAGATGTTTATGGGAGCGCAAACAGTCCTGATAGCCCTTA
ATTCATTTCGACCTCGATACCACCTATATGTGGTATTTGGTTCTTTATGA
GATGGACCAAAATTTTTAACGACATAATTTTTAATTAGTTGTTAGATCAC
CAAAAAACGAAATTATAATTGGAATAgattaaattttattattgtaatat
ttgaaagagtcttttattttttattaaaaaattagactgattattttacc
tcttatttaCATAGATGATACACTGTAAGATATTTATATgtaattttaaa
tgtttcttgaaaagaaaattttatttctctCTGCTT Coding sequence (CDS) from alignment at sc0000096_pilon:875992..883877+ >MSTRG.12661.1.p2 ID=MSTRG.12661.1.p2|Name=MSTRG.12661.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2925bp|location=Sequence derived from alignment at sc0000096_pilon:875992..883877+ (Clytia hemisphaerica_ch_hm2_pilon)
CCTCAAAAGCTTACCAATCTAAGGAGTGATaggtcttttttattttattt
ctgttATATTACAGGACGTGGAAAGAACTACAAGGGGCGAACTCGCCATT
TCACCTCAGCAGAAGAAATTGATCGCCAGATGAACGATGACAAATGGAGG
AAAACAAGAGAAGAAGCTGAAGATTCTGAAGAATCTGATTCTGACGAGga
AGAGGGGGGTAAGAAAGGAGGTGTCATTGACATTGCAAATCCTAATCgag
ttcaaaataaaatgaagaaagttACAGAGCTTGAGGATGGAGATCAATCT
GGAAAACCAGAATTGACCAGAAGGGAAAGGGAAGCAATAGAAAAAGAACA
AGCCAGACAGAAGTATGAAAAATTACATGCTGAAGGCAAGACAGACGAAG
CCAGAGCTGATTTAGCACGGTTAGCAATCGTCAAGAAGCAACGAGAAGAA
GCTGCTAAGAAAAAGGATCAAGAAAAGAAAGATAAAGAGGCTAAACTAGT
TGAAGCTGAAAAAGCAAGAAAAGCTGCAATGGAAGCACAAGCTAGTGCTC
CTAAACCTGGTGGTCGAAAGAGAGGGAAACGGTGACCTCAAAAGCTTACC
AATCTAAGGAGTGATaggtcttttttattttatttctgttATATTACAGG
ACGTGGAAAGAACTACAAGGGGCGAACTCGCCATTTCACCTCAGCAGAAG
AAATTGATCGCCAGATGAACGATGACAAATGGAGGAAAACAAGAGAAGAA
GCTGAAGATTCTGAAGAATCTGATTCTGACGAGgaAGAGGGGGGTAAGAA
AGGAGGTGTCATTGACATTGCAAATCCTAATCgagttcaaaataaaatga
agaaagttACAGAGCTTGAGGATGGAGATCAATCTGGAAAACCAGAATTG
ACCAGAAGGGAAAGGGAAGCAATAGAAAAAGAACAAGCCAGACAGAAGTA
TGAAAAATTACATGCTGAAGGCAAGACAGACGAAGCCAGAGCTGATTTAG
CACGGTTAGCAATCGTCAAGAAGCAACGAGAAGAAGCTGCTAAGAAAAAG
GATCAAGAAAAGAAAGATAAAGAGGCTAAACTAGTTGAAGCTGAAAAAGC
AAGAAAAGCTGCAATGGAAGCACAAGCTAGTGCTCCTAAACCTGGTGGTC
GAAAGAGAGGGAAACGGTGACCTCAAAAGCTTACCAATCTAAGGAGTGAT
aggtcttttttattttatttctgttATATTACAGGACGTGGAAAGAACTA
CAAGGGGCGAACTCGCCATTTCACCTCAGCAGAAGAAATTGATCGCCAGA
TGAACGATGACAAATGGAGGAAAACAAGAGAAGAAGCTGAAGATTCTGAA
GAATCTGATTCTGACGAGgaAGAGGGGGGTAAGAAAGGAGGTGTCATTGA
CATTGCAAATCCTAATCgagttcaaaataaaatgaagaaagttACAGAGC
TTGAGGATGGAGATCAATCTGGAAAACCAGAATTGACCAGAAGGGAAAGG
GAAGCAATAGAAAAAGAACAAGCCAGACAGAAGTATGAAAAATTACATGC
TGAAGGCAAGACAGACGAAGCCAGAGCTGATTTAGCACGGTTAGCAATCG
TCAAGAAGCAACGAGAAGAAGCTGCTAAGAAAAAGGATCAAGAAAAGAAA
GATAAAGAGGCTAAACTAGTTGAAGCTGAAAAAGCAAGAAAAGCTGCAAT
GGAAGCACAAGCTAGTGCTCCTAAACCTGGTGGTCGAAAGAGAGGGAAAC
GGTGACCTCAAAAGCTTACCAATCTAAGGAGTGATaggtcttttttattt
tatttctgttATATTACAGGACGTGGAAAGAACTACAAGGGGCGAACTCG
CCATTTCACCTCAGCAGAAGAAATTGATCGCCAGATGAACGATGACAAAT
GGAGGAAAACAAGAGAAGAAGCTGAAGATTCTGAAGAATCTGATTCTGAC
GAGgaAGAGGGGGGTAAGAAAGGAGGTGTCATTGACATTGCAAATCCTAA
TCgagttcaaaataaaatgaagaaagttACAGAGCTTGAGGATGGAGATC
AATCTGGAAAACCAGAATTGACCAGAAGGGAAAGGGAAGCAATAGAAAAA
GAACAAGCCAGACAGAAGTATGAAAAATTACATGCTGAAGGCAAGACAGA
CGAAGCCAGAGCTGATTTAGCACGGTTAGCAATCGTCAAGAAGCAACGAG
AAGAAGCTGCTAAGAAAAAGGATCAAGAAAAGAAAGATAAAGAGGCTAAA
CTAGTTGAAGCTGAAAAAGCAAGAAAAGCTGCAATGGAAGCACAAGCTAG
TGCTCCTAAACCTGGTGGTCGAAAGAGAGGGAAACGGTGACCTCAAAAGC
TTACCAATCTAAGGAGTGATaggtcttttttattttatttctgttATATT
ACAGGACGTGGAAAGAACTACAAGGGGCGAACTCGCCATTTCACCTCAGC
AGAAGAAATTGATCGCCAGATGAACGATGACAAATGGAGGAAAACAAGAG
AAGAAGCTGAAGATTCTGAAGAATCTGATTCTGACGAGgaAGAGGGGGGT
AAGAAAGGAGGTGTCATTGACATTGCAAATCCTAATCgagttcaaaataa
aatgaagaaagttACAGAGCTTGAGGATGGAGATCAATCTGGAAAACCAG
AATTGACCAGAAGGGAAAGGGAAGCAATAGAAAAAGAACAAGCCAGACAG
AAGTATGAAAAATTACATGCTGAAGGCAAGACAGACGAAGCCAGAGCTGA
TTTAGCACGGTTAGCAATCGTCAAGAAGCAACGAGAAGAAGCTGCTAAGA
AAAAGGATCAAGAAAAGAAAGATAAAGAGGCTAAACTAGTTGAAGCTGAA
AAAGCAAGAAAAGCTGCAATGGAAGCACAAGCTAGTGCTCCTAAACCTGG
TGGTCGAAAGAGAGGGAAACGGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000096_pilon | genome | sc0000096_pilon:875992..883877 + |
|
