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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000096_pilon:751463..754609+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12653.1.p1 ID=MSTRG.12653.1.p1|Name=MSTRG.12653.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3147bp|location=Sequence derived from alignment at sc0000096_pilon:751463..754609+ (Clytia hemisphaerica_ch_hm2_pilon)
caatattgcaattataattttttcctgctcaaaataattctggggaaaaa
agaatatgtgtggatttgtgtattgaaagtttttcatttgagttgatttc
gttttgagagtttgttgttgcttgataaattgttttctcgctacgcaagt
ttctgcgtagctagcccctgtatctataaggctggaacaccggattcttc
cagtcgtttatacaaactaaatcccgtattattattagtagttattatta
gtagtattgatattattagtatcacacgcattataaacgactccagtcta
tggGAAGACTAGAGAAGATTTTTGATGGTCGTTTTCTAGGAAAGcgcttt
ttcatttcaaatatcTATCGGTCGCTTGTGGGATATGTATGATGTCATTG
GTGAACACCTTTTTTCTTGGCAATAATTTCGTGATTTAGATGACGAtttt
tttAGACAGTGACAAATTGCTATAAATTTGATTAGCGAGGCGGGGATATT
GCCAAAGCAAAGGTATGTAGAAGCCTTAGAATTGAACAACTAAGGGAGTG
AGACAAGGCTATAAACGTAAAGACAGCAGATTAAGTCTTTTGAAATGCAA
TTAGACAGGGTTTCAACCAAGATACCAAAGAATCAAGAAGACCAAACTAA
ACTTAATTGAGATTGTGAGACAAGAATGTAGAATCATAAGCAGTACgcat
tttttatgagaacatccaaaatttttgaagccttcggatgttctaaactt
tcgacttttaagcctaaaaatgttcatgttctgatttcaccattttgtta
gtatttatgTTCAATTTCCTAAGTAATCGTGTTTTAGAGCccgcaaagcc
ttagaatgttctttacttgttcttaatattcgTATTCGTATTtagttttt
gttcttttgaaagAATGTGTAAACCAATTAAATCATAAGACTTCAAGTTA
ACTataatttcaatcaaatttatttttaagatgGATCAAAAAGTAGAAAT
CATCGATGTTACCAAAGTGAATGAGAGAGTAAAAGCTGCTGTAGAGCATA
CTTCTCAATGGTCAGGGAAGGCTCAACCTTATGCCGAAGACCTTGTGGAA
CATTATGATGCGGAAGCAGAAGGCTATGAAGAGATGTATTTAACAATGGG
TTACCATGACCACGAGAAAGTAAACGAGATTGCATGTGAACTTATCGGAG
ACCAGGCAACTAGAGGAGAAATTGAAGTTCTCGACATGGGTTGTGGAACT
GGACTTGTTGGAGATCAACTCTTCAAGAATGGTGGCTTCAAGAACATCGT
CGGTGTTGATGCATCAGTTGGTATGATGGCAAAGGCAAAAGCTAAGGGAT
CGTATAAGGATACAATCAAGCTGTTGCTTGGAAAGCCTGAGACTTTCCCG
GAAATTCTTAAAAACAGGTAAGGCGGAccataatatttttttgaaacctt
tcTTGTTTGAAAGAGCTGCAAACAATCTCAAACTTAactaaatttttaaa
gaaaacagtATGTATACCATTAGAACAAAAACTCGGTCGGGTAACCATTT
CTCCAAATTTCCTTTACCAGGACAAAATCATTGCATCATGGTTTCAGTAA
AATGAAATTCCTATTCCATATTAATTAATTGATAGTTTTTCCGAGCTTCA
AACATAAGAATTTAGATCTATAAAGGTTATTTACCATCCCCAATAGTTTC
CTTCAAATTACCGCCACTGGAAAATATTGCCACTGTGTCACTGATGATAA
TATAAATTATTCTGATCTCTCATTTTACTGTCTTTATGTCAGGTTTGGAC
TTGTTGTCTGCTGTGCAGTTTTGGCTGAAGGTCATTGCGACAAGAAACTC
TTTGATGAGATGGTGATGTCAGCAAAGGGGCCTGGGTCCGTCATCATCTT
TTCCACCAGGGATCATTACTTAACTGATTATGGATATCAAAAGAGAATGG
ACCAATTAGAAGCGAACGGAACCtggaaattagccaaaagtaTTTTAATT
CCAAAGTATGATAAACTTGGAGATCAAAATCTTGGAAGATACaaaaaaaC
TGAAGCCAGAATTTCAGCATATAAAATATTATGATTAAACAACGTATTTT
AAGCGACGGATAAACTCTCTTGTTAGGAAAAAGTTAAATCAAGTTGAAAG
TCTTTGAAGCACACTTCTTGTTCATCTGTAAGGTTTTGAATGCAAAGCTC
CTTTGAACCTTTGAAGGTCGATATTCTTTCAAACTTCAACATCATCAAAG
GCTAAAAAGCAATTTTAGTTTtcgtttttaaacttttgttataaatgcaa
TCCTAACGCATGTCATCTGCCTCTTTGGCTTAACGTATAAATTGAATAGG
TATgatatttacaatttagttATTCTATCTTTATATATCTGTagttagta
tatgtaatcacatgataacgagtgcaattcgaatataataattgcacgag
tgatttttttgttattaattttccgagtccgaaaggacgaggaaaattcg
aaacaaaaaaatcacgagtgcaattttcgaattgtacgagttattatgtg
attacgagctaatcgcacaatggctttcactactgtttcccagttaggaa
agtaaattacagaaattacactgagagttttccatttttctcttctcttt
atggctttcttttattgttgtttattgattttctttctcacaaaataaat
ttcgaatgcaattaaaacattcgatgcaaaaaaaatgtaagaaaaaacat
taaaatcaattttgtaaacattggcgcggcattggagagtgtgattaacg
attaattgctctctacaggatgcaattattaattgctctctttgagggcg
tgccaaataagaaaaaataacccatcgtgcgattaaatttataattgaaa
gttTAATTTGAATTATGAGACGCAAatatattaagcagatattcaatggg
taaaagttggttattgagatttattaacccgaggtgatgtaatattcaac
gaggcgaagccgagttgaatatacatcaccgagggttaataaatctaata
accaacgaaaacctattgaatatatgttttttattatataccaagaggca
aaaatcaaaaaaaattaattgtgtCAATTGCCAAACGTTTCACATat Coding sequence (CDS) from alignment at sc0000096_pilon:751463..754609+ >MSTRG.12653.1.p1 ID=MSTRG.12653.1.p1|Name=MSTRG.12653.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1458bp|location=Sequence derived from alignment at sc0000096_pilon:751463..754609+ (Clytia hemisphaerica_ch_hm2_pilon)
atgGATCAAAAAGTAGAAATCATCGATGTTACCAAAGTGAATGAGAGAGT
AAAAGCTGCTGTAGAGCATACTTCTCAATGGTCAGGGAAGGCTCAACCTT
ATGCCGAAGACCTTGTGGAACATTATGATGCGGAAGCAGAAGGCTATGAA
GAGATGTATTTAACAATGGGTTACCATGACCACGAGAAAGTAAACGAGAT
TGCATGTGAACTTATCGGAGACCAGGCAACTAGAGGAGAAATTGAAGTTC
TCGACATGGGTTGTGGAACTGGACTTGTTGGAGATCAACTCTTCAAGAAT
GGTGGCTTCAAGAACATCGTCGGTGTTGATGCATCAGTTGGTATGATGGC
AAAGGCAAAAGCTAAGGGATCGTATAAGGATACAATCAAGCTGTTGCTTG
GAAAGCCTGAGACTTTCCCGGAAATTCTTAAAAACAGGTTTGGACTTGTT
GTCTGCTGTGCAGTTTTGGCTGAAGGTCATTGCGACAAGAAACTCTTTGA
TGAGATGGTGATGTCAGCAAAGGGGCCTGGGTCCGTCATCATCTTTTCCA
CCAGGGATCATTACTTAACTGATTATGGATATCAAAAGAGAATGGACCAA
TTAGAAGCGAACGGAACCtggaaattagccaaaagtaTTTTAATTCCAAA
GTATGATAAACTTGGAGATCAAAATCTTGGAAGATACaaaaaaaCTGAAG
CCAGAATTTCAGCATATAAAATATTATGAatgGATCAAAAAGTAGAAATC
ATCGATGTTACCAAAGTGAATGAGAGAGTAAAAGCTGCTGTAGAGCATAC
TTCTCAATGGTCAGGGAAGGCTCAACCTTATGCCGAAGACCTTGTGGAAC
ATTATGATGCGGAAGCAGAAGGCTATGAAGAGATGTATTTAACAATGGGT
TACCATGACCACGAGAAAGTAAACGAGATTGCATGTGAACTTATCGGAGA
CCAGGCAACTAGAGGAGAAATTGAAGTTCTCGACATGGGTTGTGGAACTG
GACTTGTTGGAGATCAACTCTTCAAGAATGGTGGCTTCAAGAACATCGTC
GGTGTTGATGCATCAGTTGGTATGATGGCAAAGGCAAAAGCTAAGGGATC
GTATAAGGATACAATCAAGCTGTTGCTTGGAAAGCCTGAGACTTTCCCGG
AAATTCTTAAAAACAGGTTTGGACTTGTTGTCTGCTGTGCAGTTTTGGCT
GAAGGTCATTGCGACAAGAAACTCTTTGATGAGATGGTGATGTCAGCAAA
GGGGCCTGGGTCCGTCATCATCTTTTCCACCAGGGATCATTACTTAACTG
ATTATGGATATCAAAAGAGAATGGACCAATTAGAAGCGAACGGAACCtgg
aaattagccaaaagtaTTTTAATTCCAAAGTATGATAAACTTGGAGATCA
AAATCTTGGAAGATACaaaaaaaCTGAAGCCAGAATTTCAGCATATAAAA
TATTATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000096_pilon | genome | sc0000096_pilon:751463..754609 + |
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