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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000096_pilon:712694..715132- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12651.1.p1 ID=MSTRG.12651.1.p1|Name=MSTRG.12651.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2439bp|location=Sequence derived from alignment at sc0000096_pilon:712694..715132- (Clytia hemisphaerica_ch_hm2_pilon)
AAAAAACCATACAGAGAATGACCGACATAAACAAAGACCAATCAACCAAA
ACTGAAATTTTAGATTTTGAAATGATGCAAGCAGTCGATGGACACACGCA
CCATAATTTGATCGCTTTCTTTGAAGGGCGCGTTTTAAAGGCTCAGGAAA
GGAAAGGAGGGCGAAAACCACACCTTGACAATCTATTGAACTTCACAAGA
CAAGCTGGTTACCGGAATATCTACCAGGAGGACATGTGCTATAAAGGAGG
ATGGGGTTTCAATAGCATCTCAAAATCTCATGGAAAGTGGAAAAATATTG
TCAAAGGAATCAAGAAATTCGCCATAGATAATACAGGTGACATTACAGAG
TACTTTTTCGAATTAGCTACACGTTTTTTTTAAGAAGCTAGTTTTACCAA
GCAATGTTTCTTAAGAAATTGACCTTATGAGCCTGAAATGTTTCTTACAT
GTTTCTAAATTTTTTGACATAATCAGTCTATTTTTCATGCAAAGAAAATT
TGATTGGAAGGTTCTTAAAAAAAAACGAATTAAAAAATGTTATTTTCTCA
TTCTCAGCCTCAGCATGTTTCTTACATGTTTCTTAGTTTTTAGGCATTCT
GAGCCTCGTGTTTTTTAAAATTGTGTTTCTTAATAAAAAACATGTAGTAG
AACTTCTGCTTCGTCCTGGACATTAGGGACAGACAGAGAGATTCCTACTC
TGTGAAAGAACGGCTAATATAATAGTTATCTCTATACTTCTGCACAGATC
TAATCATCTCAAAACTATCAATTTATTTCTTGTTTTCCTATTTCAGGTCT
AACGTTTGCTTCCTGCAAAATGATTGGTGAGATATATTCCAAGGGTCGTA
ATATTTTTAGTGGTACGGGAGATTTTTGTTACAACGGCCTGAACTACAAT
ACGTATTACGTACGTCATATCGCAAAGAAACTTAAAGCCACGCCGTCGGG
TTTATTCATGTTCTCCATACTTTGTATTCCACACGATTCCGGTGGATGGC
GCGTGCAAGGTGCTGATCACGGTCTCGCGGAATTTATTACGGAAATGAGC
CAGCTTGAGAACACGATCACGCTCCTATTTGCGGATCACGGCAACACGTA
TACACGTTACGCCGGTTGGTTAGACGGACGTCATGAACAGTTCAATCCTC
ATTTCTTTGCAATTTTACCAGGAAAAGTTATCGAGAAAATCGGGAAAGCA
TCAATTGATGCACTACGTAGAAATCGGCTTCGAATGGTCACCTTGATAGA
TGTTCACCACACTATCAAGTATCTGGTAAACTCTAGTTATCATAATAAAG
GTATCCTAACAGAAGTTCCTACCTACAGAACGTGTAGCACTCTCGAATTA
TCAAAACCTACCTATTGTATATGCAAGGGCTGGCGTAAAACTGAACAAAA
CAACACTTCATTTTGGCCCTTTGTTGAGTTTGCAGTAGGACAGCTGAATG
ATATTATTTCCGATGCGTCAGCTAAGGGACTTTGCAAAAGGTTAGTACCA
TTGGAATTTCTAAATCCAAGCTCTCTTTTAGAAGGCGTTGTAACAGACTT
CTCGTTTGATGTATTGGCGAACCCAGGAGCTGGATCTAGTAACAATGAAG
AAAGATTTTCCTTTCATATCAGGTACGAAAACCATTGGAAACTGAAAACA
TTAAGTACAAAACTCATATCTTATTCACGAATCTCTTCATACAACGGTTA
TCAAAATTGTAGTGACACAAAGTCCAAAGACCTGAAGTTATGTATATGTG
ACATGAACTTGCAATCTGGCAAGAATCTTCATCGATTGTCAACTCCTTAC
AATTTGCATCCGGTGAGGACAGACAGTATTTTTAGAATCAAGAACAAGGA
TTTCTTTTTGGATGAAAATATCGCTGACATCGACAAAGGATACCTGAGTC
TTCTGAAGCGAGATGCTTACGAGCAGCAGAATCAAACAGCAAGGACTTCA
ACAACCTTTGAAGCAATTAATTATTCATTCAATAGAACCTATGAAGTCAG
CATTAATATCACCAGAATAGATCACATGAAACCAATGGATGACAAGGGTT
GCAAAGGAACTGTCAAACCTAATTCTATCAGATATCTATGTACTTTAGGA
AGGTCAGAAATTTCTGGCAATGCGACATATGACTATGAAGTAAAATACAG
TTTGTCCAAGAAAAATTAGAACTGATTAGTTTGAGGCGGTACAACATTAT
TATCCTGAAATTTTGGTCAGTAATTAATCTTTACACTATGGATAGACTAT
CGCATTTCTTAAAAATATAGAATGTTGCTAAAGTTTATTTCATTTTGATA
TTTCATATTTCGCACATTTTGATACACTGCTTTCAATTCTCTTGAATACG
AAACTACATAATGACAAATATTCGCCAGTGCGTTTTGCCTAGAGGTGGGC
GATAATGACAATTATTACCCAGTTATAAAAATAATTTTG Coding sequence (CDS) from alignment at sc0000096_pilon:712694..715132- >MSTRG.12651.1.p1 ID=MSTRG.12651.1.p1|Name=MSTRG.12651.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3276bp|location=Sequence derived from alignment at sc0000096_pilon:712694..715132- (Clytia hemisphaerica_ch_hm2_pilon)
GTCTAACGTTTGCTTCCTGCAAAATGATTGGTGAGATATATTCCAAGGGT
CGTAATATTTTTAGTGGTACGGGAGATTTTTGTTACAACGGCCTGAACTA
CAATACGTATTACGTACGTCATATCGCAAAGAAACTTAAAGCCACGCCGT
CGGGTTTATTCATGTTCTCCATACTTTGTATTCCACACGATTCCGGTGGA
TGGCGCGTGCAAGGTGCTGATCACGGTCTCGCGGAATTTATTACGGAAAT
GAGCCAGCTTGAGAACACGATCACGCTCCTATTTGCGGATCACGGCAACA
CGTATACACGTTACGCCGGTTGGTTAGACGGACGTCATGAACAGTTCAAT
CCTCATTTCTTTGCAATTTTACCAGGAAAAGTTATCGAGAAAATCGGGAA
AGCATCAATTGATGCACTACGTAGAAATCGGCTTCGAATGGTCACCTTGA
TAGATGTTCACCACACTATCAAGTATCTGGTAAACTCTAGTTATCATAAT
AAAGGTATCCTAACAGAAGTTCCTACCTACAGAACGTGTAGCACTCTCGA
ATTATCAAAACCTACCTATTGTATATGCAAGGGCTGGCGTAAAACTGAAC
AAAACAACACTTCATTTTGGCCCTTTGTTGAGTTTGCAGTAGGACAGCTG
AATGATATTATTTCCGATGCGTCAGCTAAGGGACTTTGCAAAAGGTTAGT
ACCATTGGAATTTCTAAATCCAAGCTCTCTTTTAGAAGGCGTTGTAACAG
ACTTCTCGTTTGATGTATTGGCGAACCCAGGAGCTGGATCTAGTAACAAT
GAAGAAAGATTTTCCTTTCATATCAGGTACGAAAACCATTGGAAACTGAA
AACATTAAGTACAAAACTCATATCTTATTCACGAATCTCTTCATACAACG
GTTATCAAAATTGTAGTGACACAAAGTCCAAAGACCTGAAGTTATGTATA
TGTGACATGAACTTGCAATCTGGCAAGAATCTTCATCGATTGTCAACTCC
TTACAATTTGCATCCGGTGAGGACAGACAGTATTTTTAGAATCAAGAACA
AGGATTTCTTTTTGGATGAAAATATCGCTGACATCGACAAAGGATACCTG
AGTCTTCTGAAGCGAGATGCTTACGAGCAGCAGAATCAAACAGCAAGGAC
TTCAACAACCTTTGAAGCAATTAATTATTCATTCAATAGAACCTATGAAG
TCAGCATTAATATCACCAGAATAGATCACATGAAACCAATGGATGACAAG
GGTTGCAAAGGAACTGTCAAACCTAATTCTATCAGATATCTATGTACTTT
AGGAAGGTCAGAAATTTCTGGCAATGCGACATATGACTATGAAGTAAAAT
ACAGTTTGTCCAAGAAAAATTAGATGATGCAAGCAGTCGATGGACACACG
CACCATAATTTGATCGCTTTCTTTGAAGGGCGCGTTTTAAAGGCTCAGGA
AAGGAAAGGAGGGCGAAAACCACACCTTGACAATCTATTGAACTTCACAA
GACAAGCTGGTTACCGGAATATCTACCAGGAGGACATGTGCTATAAAGGA
GGATGGGGTTTCAATAGCATCTCAAAATCTCATGGAAAGTGGAAAAATAT
TGTCAAAGGAATCAAGAAATTCGCCATAGATAATACAGGTCTAACGTTTG
CTTCCTGCAAAATGATTGGTGAGATATATTCCAAGGGTCGTAATATTTTT
AGTGGTACGGGAGATTTTTGTTACAACGGCCTGAACTACAATACGTATTA
CGTACGTCATATCGCAAAGAAACTTAAAGCCACGCCGTCGGGTTTATTCA
TGTTCTCCATACTTTGTATTCCACACGATTCCGGTGGATGGCGCGTGCAA
GGTGCTGATCACGGTCTCGCGGAATTTATTACGGAAATGAGCCAGCTTGA
GAACACGATCACGCTCCTATTTGCGGATCACGGCAACACGTATACACGTT
ACGCCGGTTGGTTAGACGGACGTCATGAACAGTTCAATCCTCATTTCTTT
GCAATTTTACCAGGAAAAGTTATCGAGAAAATCGGGAAAGCATCAATTGA
TGCACTACGTAGAAATCGGCTTCGAATGGTCACCTTGATAGATGTTCACC
ACACTATCAAGTATCTGGTAAACTCTAGTTATCATAATAAAGGTATCCTA
ACAGAAGTTCCTACCTACAGAACGTGTAGCACTCTCGAATTATCAAAACC
TACCTATTGTATATGCAAGGGCTGGCGTAAAACTGAACAAAACAACACTT
CATTTTGGCCCTTTGTTGAGTTTGCAGTAGGACAGCTGAATGATATTATT
TCCGATGCGTCAGCTAAGGGACTTTGCAAAAGGTTAGTACCATTGGAATT
TCTAAATCCAAGCTCTCTTTTAGAAGGCGTTGTAACAGACTTCTCGTTTG
ATGTATTGGCGAACCCAGGAGCTGGATCTAGTAACAATGAAGAAAGATTT
TCCTTTCATATCAGGTACGAAAACCATTGGAAACTGAAAACATTAAGTAC
AAAACTCATATCTTATTCACGAATCTCTTCATACAACGGTTATCAAAATT
GTAGTGACACAAAGTCCAAAGACCTGAAGTTATGTATATGTGACATGAAC
TTGCAATCTGGCAAGAATCTTCATCGATTGTCAACTCCTTACAATTTGCA
TCCGGTGAGGACAGACAGTATTTTTAGAATCAAGAACAAGGATTTCTTTT
TGGATGAAAATATCGCTGACATCGACAAAGGATACCTGAGTCTTCTGAAG
CGAGATGCTTACGAGCAGCAGAATCAAACAGCAAGGACTTCAACAACCTT
TGAAGCAATTAATTATTCATTCAATAGAACCTATGAAGTCAGCATTAATA
TCACCAGAATAGATCACATGAAACCAATGGATGACAAGGGTTGCAAAGGA
ACTGTCAAACCTAATTCTATCAGATATCTATGTACTTTAGGAAGGTCAGA
AATTTCTGGCAATGCGACATATGACTATGAAGTAAAATACAGTTTGTCCA
AGAAAAATTAGATGATGCAAGCAGTCGATGGACACACGCACCATAATTTG
ATCGCTTTCTTTGAAGGGCGCGTTTTAAAGGCTCAGGAAAGGAAAGGAGG
GCGAAAACCACACCTTGACAATCTATTGAACTTCACAAGACAAGCTGGTT
ACCGGAATATCTACCAGGAGGACATGTGCTATAAAGGAGGATGGGGTTTC
AATAGCATCTCAAAATCTCATGGAAAGTGGAAAAATATTGTCAAAGGAAT
CAAGAAATTCGCCATAGATAATACAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000096_pilon | genome | sc0000096_pilon:712694..715132 - |
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