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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000096_pilon:678624..683373- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12647.1.p2 ID=MSTRG.12647.1.p2|Name=MSTRG.12647.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4750bp|location=Sequence derived from alignment at sc0000096_pilon:678624..683373- (Clytia hemisphaerica_ch_hm2_pilon)
TCATGCCAAAGTATTTAACCCTTGGGTTTTTCTCTCATACTTGTATCACA
TTCACATATTTAGTTTGCTTGCCACAAATCTTGATCATTCATATAAAGCG
GTTGTTAGTGATATGGCATCAAGGATTGGTTTTTGAAGAAGAAAGTTTCA
AAGAGATTAATTTACGAGAAAAGGTGAAACTGACTTGACTGGCATCTTCA
CTGAAGGAACCTTCAAATGGCTTTGCTCCCCTTAGCCAGTATTAGGAAAC
AACCTGATCGTTTTGAGACAGAATTTTCTACTGATTAATAACGTTTAAGT
GTCTGTAAAAAAAGGCTAACAAATAGACTCGGGCACGCTTTATGCTTGGT
GTAGAACACAAATCTATCTAACTCGTGAGCCTTTCTTTAGTAGTTGAAAT
TTCAAATTAAACTTCATCGTCGGTAGGGAAGGGGTGTTAACTTGGCACCT
TCGAATTATACTGCTCCATTATCTTATTATTCGAATAAGACCAGGTTCTT
ACGTAACGGTTCCGTTTCGCTCCGAAACAAAATTAAGCCATTCTATTGGT
TAAAAATGACGTAAGTTTTTAATGTAACCAATAGAATGACTTCAGTTTGT
TTCGGAGTGAGACAAAACCGCAACGTGTGAACGTAATCTTAATTGTACCA
AGAAAAAAACATTTCTCAACTTCTTCTTTCAAAAATAGAAATAACAATGT
CATCATCACCATTAACTATCATTATGGATACCACCCAACAACCAACAACA
CTTGCTTCAACGACTCATCCTTCTGCAGCATTGGAGGGCGACCGATCACG
TGACAATCAGCATGAAAAAGAAAGACAATACATTTCATTGATTGGTTGCT
TGATCACTGTCACTGTCCTTATGATCCTCTTCTGTTTCATATTCTGGAAA
AGGTGAAAAACCTCTTGTATTTCATATCATATATAGAAAATTACGTATTT
AACATCTCCAAGCACATACTCCAATGTAATAGCTGGGCTCCCTCTGATAA
GTGGCGACAAAACCTATTGTGTCCCTGTGGGTAGTCAACCTGTAAGAGAA
TTTTTAACTTTTCATGGTTTTCGTACCCTTAAAGAGACCCAAAAAAGGGG
AAAACTTTTTTTCTCTGATAAAGAGTTTCTTGGGGTGGAGATCACACACT
ACAGTCATTCAATCTTTATTCAAGTATCAGGAACACATCCCTTAATAAAT
GTGTACGATCATAAAACAGTTATGCGAATGACGTCTTTCAGAGATAATGA
GGTCATTTAAATGGCTTTTAAAGCGGAAAGGGAGTTAAAACTCTTATGCT
GCCAAAATATTTCATAAATGATCCTCGCGCAAGTTAGAGAACAAATGAGA
TTTCACAAAGTCGAAGTTGACAGCCAAACCATTTTTTACTTCTCAATTAA
TTTTTATGAAAACATGGAACATCTTTTTACTCCTTGGGTTTATCCAAATC
TTACATATAAGAAATAATCCGGGGAGAGAAGTGAAAATTGGAGACCGTTC
AGAGACCTTTCAAGGACGACAAAGTTCACAAATATTAGCTAACTTTAAAA
CATGATTTAAAAGAAGGATTAGGTGAAGGAGAAGTATGACCATTTATTGC
AGGACGTTCTAGAAGATCTCATCAATTTTTCTTGCTTCCGTTTAGATCCA
ACATACGAAGGTTTTTCAAGGTAATAAGTTTTTTTCGATTCATTTTAACT
TTCTCAGACTGAACCACGTCAAAGATTAAACCTCGAAAACCTGCGACACT
TGCTGTATGAGATCATCAACTAAGTTACAAGGGATTTGCCCCTGAAATTT
TGCGCCTAGCAATTAATCCCTATTTTAAGGGCTCTGACCATAGTCAGAAA
ATTTGTTAAGGGATTCGAAGATAAAACTTTTGTTTTGGGTTGTTTTGGAT
TCCTTGTCATTTTTAACAAAAAAACTGCCTTTACAAGTTGTTCGGTAATT
TATTCTGTCAGTAGAAATTACAAAATGATGTTATGAACTTTAAAAAGACG
TTGATAAAGTTACCCTCTTTTACAAAAAATGTTTCAATGGGTAATTAAAC
TTTTTCTTTTGAAATGCTTTTAAATTGTCCGCAAAGAATTGAACTAAAAA
TTTTTCGGAAAAATTTTCTAAATTGATGTATCAAAAATTGTGTCTTTTTT
AATAATTTTCCTTCTTACATCTTTTCATCTTTCAGCAAAAGAACAAAGCG
ATCGTAGTGAAGATGATTGAATACCGTCGAGAATATCGAAGAAATGCTAT
CACTGAGGATACTTATGACAATATTTTCAATGAAGGTACTTCATTTACCT
CAATTGCAATTAACTTTTCTCTGCTTGGAGTTCTATTTTTTACCCGTATT
TTTCTGGTAGTACACTTACCGACCCAGCCACTAAATAGATATTCAGCTCG
AAATTTCTAGGCTGGAATGGCTCCAAATCTCACCTGGTGTACTGAGATTC
TTTTTTATATTAGCTTGGCTGTTTCCATTATTTTAGCAACCCCAAACGGT
TTGCGTGATGACATGATAGACTTTTTTGTAACGTGATAACGTGATTTGGA
AATTCTTTTCTTGGTGATTGTGATTTGCAAAATTATTGAGCTGTGATGCC
TTATTTGGACTTTTTCAAAGGGATGCGTGATCACCCAAACTTTTTTGCTG
ATTTGCGTGATCTTGATTGAAGACAAAAAATTGCGTGATATCGTGATCAG
ATTTACCACTTGGGGGTCTCTTTTAGGACAATATTATCGATGTTTTTCTT
CAAAATCATTTTTCTATTTTCTCATACATAGATTTCAAATCAAAATATCT
CAAGTCAGAGATTTACACTATAGATATGGTAAGTGCAATTATAAATCTTC
TAACCGTACTTTATTTGATAGCATCAATTTTATAAGAAAACTTATTGAAC
TTGTAATAAAATTGTGTCAATTTTTCTTTCAAAACACAAAAGATACCTGA
TTACGCCTAATTTGACAAAGGAACGTTAAATCCAGGTTTAATCTCAATTT
CGCTAAAGCTCACTTTCTTCATACAAGGGTGGTCGTGGGTGGAGCACCCT
TCTTGTTGACTTCGTTCTCTTCTGTTGCGAGATTTATCTCAGTTCAAAAT
GGTAGAAGCCGAGCAACAACACTAAGAGCCTTCGATCTGACTGGAAGCAG
AAAGCTTTGCAATAAAATTTTACCTCTCTCCCACCCTGAAAAGGCGAAAA
TGTTGTAGGCGACACTCGTACATATTCAAAACTTATCGAGCGGTTAGCCA
AAATATATTTCATCAATAAATGATATTTTTCACTTTGATCCCCAGGAAGA
GTGCACAGACGGGGTCAGTTTCACATTCGATCTTGACAAATACGAAATGA
ACGGTAGAGAAGATGTTAAAGAAAAAACAACCAATAAATCTGCCGACCAA
GTCGACCAGAGTGAATTTGCAGATTACCAGATTTCAAAAAAGACCAAAAG
AAATCCATACGAGAACGTCGAAATTGCAGTTCGTTCGAAGACAGACGAGA
TCAAACGCCGACATGACGTCGTCAAAGAGATTGAAGTAGTACGAACTTTT
TCCAGCGGCAAACTTCCTCGACGGAACAACCTTCAAACGAAAATACCTGA
ATTCACATGCTCTGATCCTCATTATGCAGTCCCTGTCGTAACACCAAAAA
CTGATATCCAACCTTTTGAAGCAGGTCTGAACACTAACGATGAGGGGAAA
TTAGAAAGCCCGTACCAAGTGCCGACAGGCGAGAATGAGCGCCAGAGATC
AGTTGAACATTTAGATGGCTTGCTTAACGAGCTCGATGTAGTTTACAAGA
AAACAAAAGAACAAAAAATGAGTGAATATTACAAAAGAGTTTTACAAACA
CCTGTTGAGAAGGAACAAAAGAACAATAATGTAGGTGAAAAAGAAACATC
CATAACTGTTGCTATATTTGCTGAGAAAGATGGCAAAATGTATTTTCCAC
CTGCAAAACTTGAAAAGGTTGGAAGGTTGGACGAGAAATGATTTTAATCC
TAACGAAGACATACTTTCTGGTAAAATGTATTTTCCACCTGCAAAACTTG
AAAAGGTTGGAAGGTTGGACGAGAAATGATTTTAATCCTAACGAAGACAT
ACTTTCTGGTAAAATGTATTTTCCACCTGCAAAACTTGAAAAGGTTGGAA
GGTTGGACTAGAAATGAGTTTAATCCTAACGAAGACATACTTTCTGGTAA
AATATATTTTCCACCTGCAAAACTTGAAAAGGTTGGAAGGTTGGACGAGA
AATGATTTTAATCCTAACGAAGACATACTTTCTGGTAAAAAAAGTATTTT
CCACCTGCAAAACTTGAAAAGGTTGGAAGGTTGGACGAGAAATGATTTTA
ATCCTAACGAAGACATACTTTCTGGTAAAATGTATTTTCCACCTGCAAAA
CTTGAAAAGGTTGGAAGATTGGACGAGAAATGGTTTTCTGGCAATGTTGG
TGGGCGTCAGAATGTTGGCGGAATCAAACAATCTGATTCTCATGGAGAAA
AAGGATGCTTACAATAACGGAGATACGAATATCTAACTATAAATTTACCA
ATCTGGTTCACACCCCATTCACAAAATCAATAACTTATTAGAACAAAAAA
GAAACGATGCAAAAATGTTTCTACCGATCCAAAGGGTCGTCATAGTAAAA
GTTGTACACTTTTTTCAATAAAAACAAACTATCACAGGAAAAAATCCGTG
AATCACATGCGTGTGAAAACCAATTTTCGAGGATGTGATCCTGCAAAAAA
Coding sequence (CDS) from alignment at sc0000096_pilon:678624..683373- >MSTRG.12647.1.p2 ID=MSTRG.12647.1.p2|Name=MSTRG.12647.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=354bp|location=Sequence derived from alignment at sc0000096_pilon:678624..683373- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTTTAATCCTAACGAAGACATACTTTCTGGTAAAATATATTTTCCA
CCTGCAAAACTTGAAAAGGTTGGAAGGTTGGACGAGAAATGATTTTAATC
CTAACGAAGACATACTTTCTGGTAAAAAAAGTATTTTCCACCTGCAAAAC
TTGAAAAGGTTGGAAGGTTGGACGAGAAATGATTTTAATCCTAACGAAGA
CATACTTTCTGGTAAAATGTATTTTCCACCTGCAAAACTTGAAAAGGTTG
GAAGATTGGACGAGAAATGGTTTTCTGGCAATGTTGGTGGGCGTCAGAAT
GTTGGCGGAATCAAACAATCTGATTCTCATGGAGAAAAAGGATGCTTACA
ATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000096_pilon | genome | sc0000096_pilon:678624..683373 - |
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