MSTRG.12646.1.p1 (mRNA) -

Overview
NameMSTRG.12646.1.p1
Unique NameMSTRG.12646.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000096_pilon:675413..676525-

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.12646.1.p1 ID=MSTRG.12646.1.p1|Name=MSTRG.12646.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1113bp|location=Sequence derived from alignment at sc0000096_pilon:675413..676525- (Clytia hemisphaerica_ch_hm2_pilon)
AAAGAGATGCATCCTTCGAAAAGTTCATGCGTGCTAGACCACTAGCATAC
GCTTTTGAAATACCAGAAAATGCTGGCAAGAAACCAAAATCGAAGAAGAA
GAAAAGAAGGTCACAAAAAGAGCCAGAAATATTCATAACACAAGAAACAG
CACCGGTGAAGAAATTGAAAATTCAAAAAAACTCAGCAGGTGTCGATGGG
GCATGGCAGGTAACTCAATTTTGTATGCATACTCAGAAATTCTACAGTTT
TTTTTCTGCAGTTCAAATAGTCTCACAAGGGCGTGTGCGGGTAAAAGTTT
GCGGGCTACACGTCATTTCTATAAACATAACTAAGCACTTGTCTGCGCTA
AATACCTTAAGGGAATAGAAGTTTTTGCGGGAATTTAATTCCGCGGATTG
GCAATTTTGTAAATTTTCGCGGGAATTTAATTTAGCGGATTGGCGTAATT
TTCATCCTGCGAAAATTTCTTTCCTCAAGGTATTGGCGAAAATTGTTCAA
AATAAGGTTGGGGTATCCTGAGAGTATTTCTTATTCATACAGTTGAATCA
GCGTCCTTGGTTGAATTAAAAATAACCTTGCAAACGAACTTTTGTTTTAG
TGTACAGAGAATGAACCAGAGATGGACTTGTCTTTCCTCGACCCATCAAG
CCAAACTGTAACGGAGTATACGTTGGTCCTTCGAAGTGACAAAAGTTGTG
TCCGAAGACAGTTAAACGCTGCCAACAATGCCGCAAAGATTTTTCATCAA
AAGATTTATTGGTAATAAAGAGCTTTGGTGATCGTGGGGAGTATCAAAAC
ACCAATGGCCAATTTGTCCAAACTGAAGGGAACATTTTATATGCATTTCA
AGACGAAATGTTTAACGGCTCATGATGCGAATTTCAAATTTGAAAGTGTG
GTGGTCCCTGAAAGAAGCCTTGAAAGGATTCCAGAAGAATGGAAGCCGAC
CTTGATAAATTCGGGGATCAAGCTCTAAGAACTTAAATGAACCAAATCGG
TTACTCTTTACGATATTGACATTTTTGCAAACATTTGACCGATTTTGTCT
TGATTAGTATCGTATAATCTTATGTTCATTTTAATTATTGTTGTTTCTAC
CGGAAAAGTATTG

Coding sequence (CDS) from alignment at sc0000096_pilon:675413..676525-

>MSTRG.12646.1.p1 ID=MSTRG.12646.1.p1|Name=MSTRG.12646.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=744bp|location=Sequence derived from alignment at sc0000096_pilon:675413..676525- (Clytia hemisphaerica_ch_hm2_pilon)
TGTACAGAGAATGAACCAGAGATGGACTTGTCTTTCCTCGACCCATCAAG
CCAAACTGTAACGGAGTATACGTTGGTCCTTCGAAGTGACAAAAGTTGTG
TCCGAAGACAGTTAAACGCTGCCAACAATGCCGCAAAGATTTTTCATCAA
AAGATTTATTGGTAAAGAGATGCATCCTTCGAAAAGTTCATGCGTGCTAG
ACCACTAGCATACGCTTTTGAAATACCAGAAAATGCTGGCAAGAAACCAA
AATCGAAGAAGAAGAAAAGAAGGTCACAAAAAGAGCCAGAAATATTCATA
ACACAAGAAACAGCACCGGTGAAGAAATTGAAAATTCAAAAAAACTCAGC
AGGTGTCGATGGGGCATGGCAGTGTACAGAGAATGAACCAGAGATGGACT
TGTCTTTCCTCGACCCATCAAGCCAAACTGTAACGGAGTATACGTTGGTC
CTTCGAAGTGACAAAAGTTGTGTCCGAAGACAGTTAAACGCTGCCAACAA
TGCCGCAAAGATTTTTCATCAAAAGATTTATTGGTAAAGAGATGCATCCT
TCGAAAAGTTCATGCGTGCTAGACCACTAGCATACGCTTTTGAAATACCA
GAAAATGCTGGCAAGAAACCAAAATCGAAGAAGAAGAAAAGAAGGTCACA
AAAAGAGCCAGAAATATTCATAACACAAGAAACAGCACCGGTGAAGAAAT
TGAAAATTCAAAAAAACTCAGCAGGTGTCGATGGGGCATGGCAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.12646MSTRG.12646Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12646.1.p1.exon2MSTRG.12646.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.12646.1.p1.exon1MSTRG.12646.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12646.1.p1MSTRG.12646.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000096_pilongenomesc0000096_pilon:675413..676525 -