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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000096_pilon:634892..637740+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12643.3.p1 ID=MSTRG.12643.3.p1|Name=MSTRG.12643.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2849bp|location=Sequence derived from alignment at sc0000096_pilon:634892..637740+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaaattgacagtgaaagaaaatttggtgtAAGTAAAGGATTAAGATAA
CTCCTCCCATTCTCCTCTCGCTTAATTAATCGACTTGTGAGAAAGATACT
CCAGTAACTTTGTTTGTATCAGTTTGTATAGTTGTTGTGGTAAACAGTCT
TGCGAGCATGGACAAGTTTGATCTGAGTGGATTTTATGTAAAGAAAGTAT
TATTAAACATGTAAGAAGTTTGAGTGGCTCTAAGAGGTTTGTAAAGATGG
TGTAGTCTTACTACCAGTGGGTTTGTTGCCAGGATATCCAAACTAGTGGT
TTTTGTAGGCGACTGCGATTCAGATCAATGTTTGTGTGAGTGAGTTGCGT
CGATTGAAGAAGTAAAGGGAATTAAAGttgaccctctctaattcgatttc
aaGGCCTTTTTCAAGTGTAAttggatttttatcgaataagggggttgtat
cgaatagtagagtgtcgtttttgagagtttcttgttgatggtgaCTTTTA
ATATTATTGAACAATAGAGCGTATCTGATTAGAGACTTGAATGTTGATTG
CGGTACGGTGGTTCAATAGTTCCTGGCCGGATTGTAgagattttttagtt
ttatttttgattttttttctgcatCATCAAATCGATGTTATCGACCTCAG
TGTGTTTCAAACTATCTAGTGCATCCACTCAAGTCATTGCAGGATCagca
ttgtttttaaattgttctcatATTTTGACGATTTGTAGCCtaattgattt
tataaaatgattattataaaaaaaggtacGGAATTCTTTACGGCAGAAAT
ATTCCTCCTTTGAGTTTGTCCCTATTTTCTGtaataagaaacaaaagaaa
attggtCAGGAAAAAGATGCTAGTCTATTATTTACAGatacataactttt
gaacactACTTTATGAACTAAGCTGAGAAATATCTTTTACGTTTCgtatt
actcttaggtgcctagtagttaatttttgaaaatatttttagcagTCAAA
AGAAGAGTCCATTTTTTGCTGGTTTTAGTCTATGATTacctttttttttg
gggggggggggggaggcagGGGTATTTAGAGGTACATTTCCACCCCTACC
GTTTATTAACATTTCGACACACATCCAGGCCAGGTAGGCACCCCAGAGTA
ACGACTTTGAATTCTTATTTCCTTGACCAATACAATGATTCTTTGATTAA
CTTGAACAAAATACAAGAGAAAAACGTCTAAACTTCTTAACACTTCATCT
ATATCTTGGGTCATTTTAatactttgtgaaatattttctttctcgCCCCA
CGGAAATGACCATATTTCTAAATCTTATGACATTATTTCACACAGTTCTA
AGAGTTTTTGTATGTAGAGATTATGAGCTTTGTGAGAGTCGCGTCATGTG
TGAACGTGAGTTGACAACATCTCTCTCCgtataaaaaacactttttaaaa
tacttgctTGCTTCTGAGGTTTTATGTAAGTGATGTTCAAGGTTCGGTCT
TAACTACAAATGAATTACAACGGCTGGTTGGTTTAACGAGttataaataa
tttgaatttcgGGCTTAAATGGTTCGCTTTCTTTCCAGCTTAAAATAACG
ATATCGAACACAAGAAAAAACTCCAAGAATCAACTATGGAGACGATACCA
GAAGGATTATTGGGACCTCGAAAGAAATCAAATTCGTTCAATAATCGCTT
CACTGAGCAAACACGATCTTTGACACGTTTAAACCCTGAAAGCATATTAA
AGAAATCACCACTTCAGCGATCACAATCTACCGCCAGTATAGAGAACGTT
CTTCACAACGCTGTCTTAAGGGAAGACCATGAGGCGGTAGTCCAAATTCT
GAACAATAATTTTCTTGATATAAACGCTTTATCAATTGATGGTTTTACCT
CACTTCACCAAGCTTGTATAGTGGGTAATGAAGAGACAGTTAAGTTACTA
ATCGAGGCAGGGGCAGATATAACTTTGAGGACACGACGCAAGAAACATGA
ATCACCTTTAAAGTTAGCTTACCTGAACGGCAACTTCGAAGTCGCGGAAT
ATTTGTTATCCCTTGGTGCACATGATGCAGAAATTAAAAACGGAATGTCC
AAAAAATGTTTCGGAAGAGCAAACACTTTGGCTTCGTAAAATGGTTTTGA
GAATCGTGTTTTTTGGGGAAGACTGCTAAATAGCCGCtgaactttttcga
aaaaattggtCCAATGGCGTTGAGTATCAATGCATGTTTCTCTGCATCCT
TGAAAACAGTGGTATAGCCTGGAACTGAGACCACGATTCCTCTTCCTTTT
TAGAAGTCAAATTTGTTTCAGGGTCTTAGAAGTTGTAAATAGTCAGTAAG
TTTaattttcttgaatattttgTAACATATTTTTTGTGAGGTTCCAATAT
AAGGAAACTATGATTTAAAAGGTAAATTTTAAATAGAGCCATCTGATAAA
GACTTATTACAGAAACCTATTAACCCTTAAAGCTTGATGAAAGTGTATTC
GAATTTACCAGGAAAAGATGACGTCAAAAAGAGCGTTAAAATGTCTGACG
TTGTTGCATTGATGAAAAGTTCTGACGTTAATCTTTCCTGGTAAACTCGA
ATCCCGTCTCCTCACGCTTTAATGCTTGAAAGGTGTATTTTCATTCCCAG
CATCACATAGTCGGtgttaaatttgattttccttCAACTTTGGGACTTGA
TCCGTCTTTTATCACCGCCCCTATTCTTTTGTGGTTAATCACGTCTTCAC
AAACTGTCGAAGTTCTGTATCCATTTCTGCTAGACCAGCTAGACGTTTGT
TACTTGAATTAGCGTTGGTTGAACTAGCATTCATTAGTATTTTAttccc Coding sequence (CDS) from alignment at sc0000096_pilon:634892..637740+ >MSTRG.12643.3.p1 ID=MSTRG.12643.3.p1|Name=MSTRG.12643.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=504bp|location=Sequence derived from alignment at sc0000096_pilon:634892..637740+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGACGATACCAGAAGGATTATTGGGACCTCGAAAGAAATCAAATTC
GTTCAATAATCGCTTCACTGAGCAAACACGATCTTTGACACGTTTAAACC
CTGAAAGCATATTAAAGAAATCACCACTTCAGCGATCACAATCTACCGCC
AGTATAGAGAACGTTCTTCACAACGCTGTCTTAAGGGAAGACCATGAGGC
GGTAGTCCAAATTCTGAACAATAATTTTCTTGATATAAACGCTTTATCAA
TTGATGGTTTTACCTCACTTCACCAAGCTTGTATAGTGGGTAATGAAGAG
ACAGTTAAGTTACTAATCGAGGCAGGGGCAGATATAACTTTGAGGACACG
ACGCAAGAAACATGAATCACCTTTAAAGTTAGCTTACCTGAACGGCAACT
TCGAAGTCGCGGAATATTTGTTATCCCTTGGTGCACATGATGCAGAAATT
AAAAACGGAATGTCCAAAAAATGTTTCGGAAGAGCAAACACTTTGGCTTC
GTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000096_pilon | genome | sc0000096_pilon:634892..637740 + |
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