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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000096_pilon:570460..574276+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12640.1.p1 ID=MSTRG.12640.1.p1|Name=MSTRG.12640.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3817bp|location=Sequence derived from alignment at sc0000096_pilon:570460..574276+ (Clytia hemisphaerica_ch_hm2_pilon)
ttttagaataTATGTAAAAcataaaacacaaaaatataaacCACAGAATT
ATGTCCTACAGAAACATATCAAGCTCTGGTTATGGCAGAAAGAAGGCATC
TCACTTCCCGACATCTCCACAACCCAAATCTGTTTTGAGACCAAAGCAAT
GGGATCCTTATGTGGAAGAAGGTAatgtctaaaaaaaattaacatagaCA
GTGCTGTAGCAACTTGGGGAGGGGGACTATTGGGCTTCCTACTATGGCAC
TGAGGCTCAATATAGTAAGAGAAGAACTTCtatataatgatattcatatt
ttattttattttatactacttgtataattttatttgcacttaaaattgaa
acttaaaaattattattatatactagccggtacccggcgtcgcacgccgg
ttaagctgtagctgaacgcactcaAAGTCCTTTTGATGTTGAAGCTgatc
aaattaataaaaagatgtcttcaaagtttgactctaaccctcccccggag
atctttttctcgcttcgctcgcattaaatacgccgtccagttttcgacaa
attgagaaaatgtcatgctaaagaggagtgaaatgtagaaatgacaattc
tttaggaaaagGCGGGAAaaccacaaagaatagtgcaactttgttttcat
cagatcatggaggtaataaagattggagagtcaatgccttttgttctatt
ctgatttatcatcggagcaaacagctgtttggttgctttgggaataagat
gattaattttgggtatactcatgggaatatttaagttAAGTTAAtatgtt
ggatttttaacaactctattgtgagaataactttgtttatcaaaataaga
aaaaggttgccgtaacaagcacaaaatcctatatttctaaggctcccctc
tcataaaatcatcgataaatttcaaaaaaattctatattACGAATAGGTA
ACCTTTTAATCaatcatccatcagaatttgaaacccccctcccttttaga
cgtaaagatttataatgaagaaattttcaaggaaaatgtgctgaaactct
caaaattagcactgtgttcgcccaaaaatacatcgatatgaaatcataga
actTTTGTAACCtgactttgagaaaattattttcgtatcgcgtttgaaca
agaactttttgcataataagtttatttcaatcaggataacattctcactt
ctgttcttataaatttacatttcggatttttttgcttccaatgatggtac
atcaaagaaaaagccgctttgaatagatttataaaagatttcaacgatca
tttaggtcattaccgagacgttttctctccatctatatctttattacctc
catgatcagatttaaaaagataaataactcaattctaaattgcttttttt
aaacccttgtcataacttttcgaaattaaacatgtaaaatgacgtaagTT
TTTAATAGTATCAACCACtggaatgtttttatatgaagaaaaagatggac
taatttcttctcttgctttttatcgccctttgctGAAagaaaggctgaat
aaagtctaaaccatgCTCTATTCGATccgtcaatcaaaacaaacttatcg
agaacaaaacattgcttgcgaaatcgaaagtgtgcgcgaatccaatagaa
caaatttgtggagcaatagactaaaagtcataattttaaaacacaaacaa
agcgaaaacgaaagtggtgacacacagacacacaaagcaccgctattaat
atatagatttatACATTGCTGAAAAGTTTAAGATCACCTCATTACAAACT
ATAGATAAAAAGCTCCTTTTCTTGGACGTTTTTGCTCTTTGCTAGggatt
gaaaaaaacaaaaaaatacaaaattcgaTTTTGGTTAGGAAATTTTTCGT
CACTTCGCTGAAATGTTTCACATATCTGAGAAACAACTGGTTTTATTATT
TACTTTCCTTTCTCTTCTTCAGCATATCGTTTTCAAGTGGCAGGATACCG
TGATGAAAAAGAATACAAACATCTACAAAATGATGAAGAGGTTAGttcat
ttttgatgaaataacTCTATAACGctatattaaaagtttttatttttaca
tataggtgttcccgtttcatatcagacacatattttatatcaggacagtg
tcttgctattgttatactGTGCAAATTTTGGTAGACTTACATGAAAAACA
CTTTgtgtaatttaaaaaataattttcgacaTGTTTTTTCTGAACCACCC
ggtattatgctgatataagcaaaaaaaagtttttctttccctctttctga
tcaATATTGCTCCACACCCGtgccaatccaatgtgaaaaagtttcTGAAT
TAAAACGATATCATCTTATTTAaagacaaaacctttaatatgtCCACTTG
CCTGCAACTTTCTAAAGGATACAGAGAATGTATACAGATGTTTTTTACAT
AACACCTCTGTAAAAATAGGGTTCAAAGTTCTCACTCCAATGAGTTTTTG
AGATCTCAATTTTAAACCCGGTGAAATATTACGCTTTTCCTAGCCACCCT
GGATGATTCTAAAACTTCACCGGGTCATTGAGACAGGACTGTAACACAAA
GTATAATTGACTTTGGAATCCACATCTCGCCTTTCATCGGGAGAAACTAT
TCTGTAGTCTACTTACAGTGAAAGGGTTCGGGATTTGGTTTCTTGTCAAA
TGAAACATAGATATAATGGGCCATTCCCCCTCActttgtttcaaataaaa
aattatttttaaagaatcAGGACTAAAACCTATATTAACTTCATTTCTAG
GTAAGATCAGTCTGAAAAGGGGGCCATTTTAAAGCATATTAACcatgcgc
ctccttagtcactatgcaTTTTTGGCCCCTCCACCACTGTCCAGAGCGTT
GGCCCTTAAATTAATTTGTTCTCTcgtcaactttttttaggttgacCGTT
GGCCAGATACGGGATACGTGAAGAAACTTCAACGGAAAGATGGAACATTT
TATTATTACAGTAAAGCCAGAGAGTGCAAAGAAAAAGATGTCAATCGAAC
TAAATTATATGCTTATTAAATCAGTGTTCCTTACCTTTATCGTCAGTTGG
AATGTTAACGAAAGttgaaaacctttaaagaaatgttgttggaaaagttt
tgaaataaattttgagatggTTAACTCTGGTTGTACCGAGAGATGATTTT
CATGCGCTTAAAAGCAAAATGTATGTCTGCCAGAAGTAtgccaaaaaaga
gaaaatctaaACTCaatcgaaattattttattttattattttataaaatt
attgaagccttcggatgttctgagctttttgagtttttagaagcttaaaa
atgttcttaacatgttctttttttcgcCATAGTGTGGGTTAATGTCCCAA
Ataaagtccacaaagccttaagttgttctcaaaattttggccatggaagc
ctTGTAtggcttgttcttataaagaacaaTTTAGTTATTTTGTTTGCCTT
CCATAATAtttttttAGGATATTCTTTGATTTTTAGGTAGTGGACTTGCA
TTGATAGATATAATTGATATAATAAAGAAATGGtttttttGTCACGCTTT
CTCTCGGGCGATGGGTCAAAATTACTATCATATTCTCACAGGTGCAACAA
ATCATAAATAAGGAAAGGAGCCCCATcagataaattatttttattgtata
tattggaaatatttttttatgttattaCAAAGaattgtctttctttttct
aGAATAAAGTTTATCACAAGAGTTGAACGACGTAACATCCATAACGAAGG
GTAAAGCACTAAAAAAT Coding sequence (CDS) from alignment at sc0000096_pilon:570460..574276+ >MSTRG.12640.1.p1 ID=MSTRG.12640.1.p1|Name=MSTRG.12640.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=954bp|location=Sequence derived from alignment at sc0000096_pilon:570460..574276+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCCTACAGAAACATATCAAGCTCTGGTTATGGCAGAAAGAAGGCATC
TCACTTCCCGACATCTCCACAACCCAAATCTGTTTTGAGACCAAAGCAAT
GGGATCCTTATGTGGAAGAAGCATATCGTTTTCAAGTGGCAGGATACCGT
GATGAAAAAGAATACAAACATCTACAAAATGATGAAGAGgttgacCGTTG
GCCAGATACGGGATACGTGAAGAAACTTCAACGGAAAGATGGAACATTTT
ATTATTACAGTAAAGCCAGAGAGTGCAAAGAAAAAGATGTCAATCGAACT
AAATTATATGCTTATTAAATGTCCTACAGAAACATATCAAGCTCTGGTTA
TGGCAGAAAGAAGGCATCTCACTTCCCGACATCTCCACAACCCAAATCTG
TTTTGAGACCAAAGCAATGGGATCCTTATGTGGAAGAAGCATATCGTTTT
CAAGTGGCAGGATACCGTGATGAAAAAGAATACAAACATCTACAAAATGA
TGAAGAGgttgacCGTTGGCCAGATACGGGATACGTGAAGAAACTTCAAC
GGAAAGATGGAACATTTTATTATTACAGTAAAGCCAGAGAGTGCAAAGAA
AAAGATGTCAATCGAACTAAATTATATGCTTATTAAATGTCCTACAGAAA
CATATCAAGCTCTGGTTATGGCAGAAAGAAGGCATCTCACTTCCCGACAT
CTCCACAACCCAAATCTGTTTTGAGACCAAAGCAATGGGATCCTTATGTG
GAAGAAGCATATCGTTTTCAAGTGGCAGGATACCGTGATGAAAAAGAATA
CAAACATCTACAAAATGATGAAGAGgttgacCGTTGGCCAGATACGGGAT
ACGTGAAGAAACTTCAACGGAAAGATGGAACATTTTATTATTACAGTAAA
GCCAGAGAGTGCAAAGAAAAAGATGTCAATCGAACTAAATTATATGCTTA
TTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000096_pilon | genome | sc0000096_pilon:570460..574276 + |
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