MSTRG.12638.2.p2 (mRNA) -

Overview
NameMSTRG.12638.2.p2
Unique NameMSTRG.12638.2.p2
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000096_pilon:567428..570045+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.12638.2.p2 ID=MSTRG.12638.2.p2|Name=MSTRG.12638.2.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2618bp|location=Sequence derived from alignment at sc0000096_pilon:567428..570045+ (Clytia hemisphaerica_ch_hm2_pilon)
ATCAGATCGATAAAAGTGAGCaagataaaaatttaaaagcttGCTTTTTA CAAGCATTAATATATATTTCAGATGTATGTTTAAAAGCACCACAAAAAGA AAGGAAAGTTGCAAGAATATTATAGgtgaaaatttaatgaagttTTGTTG ACCAGTTCTTGAGACgtccatttttattatttgatgacatcatcactGGT TTTAAGACAGGTTTTAAGCCAAAATCTCAACTAGACATAAAGCAATAACA AtactaaataattttttcaattgcAAGAAGTGGTATTGATGACTTAATTA GAGGAATCTGCGAGGATGTGGAAACTAAATTTCATAACTTGAAGATTTAC TTGTGTGAACATGTTGGTACTTTTTCTGAACATTTATATGAAGAGTGTCA TGGAAAAGAGACAAACGACAAAAATATGGATTTCTTGAATGGAAAAATGA ACAAAGCTTTGATGGAATTAAAGTTATCATTTGAAAACATactagagaaa aaaattcaagaatttaAAAGTGACTTTGGAAGTATTCTCAGCAGAAGTGT TTTGGATTATGATAAACAAATATGGTGTTTAACAAACAAGTTTTCACAGT TTGATAATGAgctcaaaagtttttatttggaaaaggttaaaataaaagac aatgaaagagtattggcaaacgaaaaatttttgatttttaaaaatcaatt tacaaaacTATCTTCAAAATGCTACAGAATGTGAATTATATCCAACAGGC AATTTGATCATAAGTGGCAGTGTTGCAGATGATACCAAAGTTTGTTTACC AAATGAATTCGATTTGATGTTACCATTAATTCTTGAGGATGGTGTTTCTT ATCAACAACCTGCCTCTCACCTAATGAAAGTGATGATCGAAGTTGAAAAA GGAACTCAATCTTTTTCTAATTGCTGGATGTATTTGACAGAGGAAGAATC TTACACTGCAAATCGTGTAAGTGatatgaaaaaaactttcaacacgCAAA AGTATCTGTCTCCCAGAAGTATCTCgcagaaattaaaagaaattatgaaG CATTTCTTTACAGATGAGAATGTGATTGAGAGTTTAAAAAGTGatggaat ttttttgaattttgccaGATCTGAGCATTTTTACAAGTTTGGGCCAGCTA TTGATGTACTTGTGTCTTACCAAAGTCCTCAAGGCTTGGGATCGTTTGTC GTGGACGTGGTTCCATTTTTACACATTGCATCTGTTGGCCAACATGTAAT AAATCCATATTATTctgattttgtttttatgtcTGGTGGTAAAGCCCCTA ATTACATTGAAGAAGGCTTTCATGATCCCACGATCTATTGGAGGAAGAGC CATTCCAATCTTGAGCACAAACTCTTTCAACATTTCAAAGAGAAACTAAG AATACCTTTAatgatttggaaaacgttagctttgaaaaattcttttttta ataaggcaCCTATTGTGAATTCTTTTCACCTCAAGAATGTTGTGTTGCTT CTTGCATTTGATCGGTTAGAAACACTATCTAAAGAATGGGTCAACGATAC TGGAAGTGTCaactttgatgattttgttGACAAATGGCTTTTCTACCCTT TACCATTGCAAGTAAAAGAAGTTGGAAAGCGACTGTACAACTTCTTCAGG GCAGGCACTATGCCTTGGGCTTTTCATAAAAACATTCACGTTAAATTTAA accaaaaaacaaagaaatatgtAAAGATTACAATTTGAATAGTATGAGAA GTATTTTAGCAGATTATCTCGAGGATATTATCAAATCAGACGATTGGTGT AAACTGATTCATGATTCAGAAATAACAGTCAATATGAACGAATGTCCCTA TAGTAGAGTTAAGGGACCCACAAAGTGTAAACTTATTTgcaaaaattaaa gttatataatatttgtgattttaataaccctttgtacatttttttggaGG GGGTCTCAAGGTGCTAGGATGTGTGATAGCCTTTGAATATTTTatccaat tgacttgaaatcttGCAATTATACACCAAATATGAATTCTTTAGTAAATA TTTTGGCATCATTGATGATATTATCGTATTCTTTGAAGATGCCAAAAAAG GACCACATCTcactttttttcagtttcatttttttgcacaaattttGTGA AGTATCTCCACCTACCAAatacttttgaacaaaaaattgaatatacttga agtgttttttcaattttagattttgtaCCGAGATAGATTTTGCGTTCTTA TCTAGGACGGGGGTAGGAGTAGGAGACCACATGCTACggtctttattttt ttattaattatgtGTTCTGACTTCTAGGAACATTTTATTGCACAAAGTTT CCAAATTCAAAGATTGTGTGAATTTTATGAGACCAACGTTATAGTAGAGA TTTATAAAAAGGGAGACTTCGTAATCTCGATTTAGCCCCAAAATTACTGC TGGATTAAGATCTAAATAGATGTTTGGCTTAAGTAAGGCATGGTTGAGCC ATTATCAAGATTTGCTTCATTAATTACAAAGTGAAGTAGCCTCAAAAAGT TGCGTTTCTTCTAAAATAATGGAAAATTCTGTATTTCTCCCTTTCTTCGA AGTATTAATGAAGTAGCC

Coding sequence (CDS) from alignment at sc0000096_pilon:567428..570045+

>MSTRG.12638.2.p2 ID=MSTRG.12638.2.p2|Name=MSTRG.12638.2.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=309bp|location=Sequence derived from alignment at sc0000096_pilon:567428..570045+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATTTCTTGAATGGAAAAATGAACAAAGCTTTGATGGAATTAAAGTT
ATCATTTGAAAACATactagagaaaaaaattcaagaatttaAAAGTGACT
TTGGAAGTATTCTCAGCAGAAGTGTTTTGGATTATGATAAACAAATATGG
TGTTTAACAAACAAGTTTTCACAGTTTGATAATGAgctcaaaagttttta
tttggaaaaggttaaaataaaagacaatgaaagagtattggcaaacgaaa
aatttttgatttttaaaaatcaatttacaaaacTATCTTCAAAATGCTAC
AGAATGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.12638MSTRG.12638Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12638.2.p2MSTRG.12638.2.p2-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12638.2.p2.exon1MSTRG.12638.2.p2.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.12638.2.p2.exon2MSTRG.12638.2.p2.exon2Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000096_pilongenomesc0000096_pilon:567428..570045 +