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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000096_pilon:566101..570045+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12638.1.p2 ID=MSTRG.12638.1.p2|Name=MSTRG.12638.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3945bp|location=Sequence derived from alignment at sc0000096_pilon:566101..570045+ (Clytia hemisphaerica_ch_hm2_pilon)
ctggggccgTTCATGCACTGGCGAACTGACtctagaaacacttgagaaag
tcagaaaatcagggtagaagataggaaagtagaaaatgaaggggaaaata
agagaggatgcatcctggtggatgatattgTTTACAAACCCACTCAGATG
CTACAGCTTCGATTGTATTGAATACCTTCAATTGTATCAaataccataag
ttggtctaatatcgacatccctcgtctaattccgacacccttttttagag
acaggataatatgaaagcttgaatcactgattgaaaaagaataattCCTC
TCTTCTGACCattaaaagcaaagaaaaacagtttcaacctttctattaAT
TTCAGCTGATGAAAAGGGTGTCCAAagtagaggagggatgtcgatattag
accaagttacggtatgtTGCCTGTAATGCATCAAGAATCTGAAACCAATT
TTATCTCACCCAATTAACACGTGTgattcacttttgttttctctgataTC
AATCAGAACATGCAACatgagttacttgaggaaaccTAGGGTGAAAACAC
ACAAAATTGCAGGAGAATTAGCATTTAGTGGGGTCAATCTTATGGATAGT
GTTTCAAGTAtccaagtaagtaagtatataaCAGAGGAAATTCCACTGAA
GTCGGGAGATCAAGGGAACAGTGTTTTATTGGAAGTTATGGACAGGAAAT
GTACTGTTTTTGGTCAGAATTATGCTTTTTCGCTCATAATAATTTTTCTA
ACGAGCCCTGTTTTCTCAGGTTTTCTACTGTCTTAGGGGGACTGGGTTAT
CAATGGTTATCAAAGTAGTCAATTGGTTATCTAAgttatcaaaagttatc
aataacaatcaaagtactcaaaCGGTTATCAAGTCTTCAAAGagtgaatc
aattttttgaaattttagtgctTAACAAAATTCGCTTGTTAATAAGTGGT
CGTTCGATTAACTTTGATCATTATAGATTACTTCAATCATTAAGGATTAC
TTCGATAATCAAATTTATTGATTAGTACTGCATGCACTGATGCCCTGGTT
ACCTATTGTAGTAAAGtgtacaaaatctttttgaaaaaatgattattaAT
CCTTGACGAGCTATAACCCCTTAAAATTGAccctattttttgtttatttg
gaaTTATTAGCCCAATTTGACAATTTGAAATATTAATGTCAATCGATAAA
GTTGTTAAACTGTTGCACGATGTAATtacgatgacgtcatattttgcAGA
TTTCCTGCGAGAGTTACTTTATGAAGTTCATTGACATGCAGATGAGttca
atgatatttttttaaggCCCTCTTTATATCAGATCGATAAAAGTGAGCaa
gataaaaatttaaaagcttGCTTTTTACAAGCATTAATATATATTTCAGA
TGTATGTTTAAAAGCACCACAAAAAGAAAGGAAAGTTGCAAGAATATTAT
AGgtgaaaatttaatgaagttTTGTTGACCAGTTCTTGAGACgtccattt
ttattatttgatgacatcatcactGGTTTTAAGACAGGTTTTAAGCCAAA
ATCTCAACTAGACATAAAGCAATAACAAtactaaataattttttcaattg
cAAGAAGTGGTATTGATGACTTAATTAGAGGAATCTGCGAGGATGTGGAA
ACTAAATTTCATAACTTGAAGATTTACTTGTGTGAACATGTTGGTACTTT
TTCTGAACATTTATATGAAGAGTGTCATGGAAAAGAGACAAACGACAAAA
ATATGGATTTCTTGAATGGAAAAATGAACAAAGCTTTGATGGAATTAAAG
TTATCATTTGAAAACATactagagaaaaaaattcaagaatttaAAAGTGA
CTTTGGAAGTATTCTCAGCAGAAGTGTTTTGGATTATGATAAACAAATAT
GGTGTTTAACAAACAAGTTTTCACAGTTTGATAATGAgctcaaaagtttt
tatttggaaaaggttaaaataaaagacaatgaaagagtattggcaaacga
aaaatttttgatttttaaaaatcaatttacaaaacTATCTTCAAAATGCT
ACAGAATGTGAATTATATCCAACAGGCAATTTGATCATAAGTGGCAGTGT
TGCAGATGATACCAAAGTTTGTTTACCAAATGAATTCGATTTGATGTTAC
CATTAATTCTTGAGGATGGTGTTTCTTATCAACAACCTGCCTCTCACCTA
ATGAAAGTGATGATCGAAGTTGAAAAAGGAACTCAATCTTTTTCTAATTG
CTGGATGTATTTGACAGAGGAAGAATCTTACACTGCAAATCGTGTAAGTG
atatgaaaaaaactttcaacacgCAAAAGTATCTGTCTCCCAGAAGTATC
TCgcagaaattaaaagaaattatgaaGCATTTCTTTACAGATGAGAATGT
GATTGAGAGTTTAAAAAGTGatggaatttttttgaattttgccaGATCTG
AGCATTTTTACAAGTTTGGGCCAGCTATTGATGTACTTGTGTCTTACCAA
AGTCCTCAAGGCTTGGGATCGTTTGTCGTGGACGTGGTTCCATTTTTACA
CATTGCATCTGTTGGCCAACATGTAATAAATCCATATTATTctgattttg
tttttatgtcTGGTGGTAAAGCCCCTAATTACATTGAAGAAGGCTTTCAT
GATCCCACGATCTATTGGAGGAAGAGCCATTCCAATCTTGAGCACAAACT
CTTTCAACATTTCAAAGAGAAACTAAGAATACCTTTAatgatttggaaaa
cgttagctttgaaaaattctttttttaataaggcaCCTATTGTGAATTCT
TTTCACCTCAAGAATGTTGTGTTGCTTCTTGCATTTGATCGGTTAGAAAC
ACTATCTAAAGAATGGGTCAACGATACTGGAAGTGTCaactttgatgatt
ttgttGACAAATGGCTTTTCTACCCTTTACCATTGCAAGTAAAAGAAGTT
GGAAAGCGACTGTACAACTTCTTCAGGGCAGGCACTATGCCTTGGGCTTT
TCATAAAAACATTCACGTTAAATTTAAaccaaaaaacaaagaaatatgtA
AAGATTACAATTTGAATAGTATGAGAAGTATTTTAGCAGATTATCTCGAG
GATATTATCAAATCAGACGATTGGTGTAAACTGATTCATGATTCAGAAAT
AACAGTCAATATGAACGAATGTCCCTATAGTAGAGTTAAGGGACCCACAA
AGTGTAAACTTATTTgcaaaaattaaagttatataatatttgtgatttta
ataaccctttgtacatttttttggaGGGGGTCTCAAGGTGCTAGGATGTG
TGATAGCCTTTGAATATTTTatccaattgacttgaaatcttGCAATTATA
CACCAAATATGAATTCTTTAGTAAATATTTTGGCATCATTGATGATATTA
TCGTATTCTTTGAAGATGCCAAAAAAGGACCACATCTcactttttttcag
tttcatttttttgcacaaattttGTGAAGTATCTCCACCTACCAAatact
tttgaacaaaaaattgaatatacttgaagtgttttttcaattttagattt
tgtaCCGAGATAGATTTTGCGTTCTTATCTAGGACGGGGGTAGGAGTAGG
AGACCACATGCTACggtctttatttttttattaattatgtGTTCTGACTT
CTAGGAACATTTTATTGCACAAAGTTTCCAAATTCAAAGATTGTGTGAAT
TTTATGAGACCAACGTTATAGTAGAGATTTATAAAAAGGGAGACTTCGTA
ATCTCGATTTAGCCCCAAAATTACTGCTGGATTAAGATCTAAATAGATGT
TTGGCTTAAGTAAGGCATGGTTGAGCCATTATCAAGATTTGCTTCATTAA
TTACAAAGTGAAGTAGCCTCAAAAAGTTGCGTTTCTTCTAAAATAATGGA
AAATTCTGTATTTCTCCCTTTCTTCGAAGTATTAATGAAGTAGCC Coding sequence (CDS) from alignment at sc0000096_pilon:566101..570045+ >MSTRG.12638.1.p2 ID=MSTRG.12638.1.p2|Name=MSTRG.12638.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=309bp|location=Sequence derived from alignment at sc0000096_pilon:566101..570045+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATTTCTTGAATGGAAAAATGAACAAAGCTTTGATGGAATTAAAGTT
ATCATTTGAAAACATactagagaaaaaaattcaagaatttaAAAGTGACT
TTGGAAGTATTCTCAGCAGAAGTGTTTTGGATTATGATAAACAAATATGG
TGTTTAACAAACAAGTTTTCACAGTTTGATAATGAgctcaaaagttttta
tttggaaaaggttaaaataaaagacaatgaaagagtattggcaaacgaaa
aatttttgatttttaaaaatcaatttacaaaacTATCTTCAAAATGCTAC
AGAATGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000096_pilon | genome | sc0000096_pilon:566101..570045 + |
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